BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0344100 Os04g0344100|J065155J10
(99 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0344100 Terpene synthase-like domain containing protein 200 2e-52
Os04g0344400 134 1e-32
Os04g0341800 Terpenoid cylases/protein prenyltransferase al... 108 6e-25
Os04g0338600 103 3e-23
Os05g0309900 100 2e-22
Os04g0339500 100 2e-22
Os04g0338400 99 9e-22
Os05g0258800 96 4e-21
Os04g0345400 Terpenoid cylases/protein prenyltransferase al... 95 9e-21
Os04g0340300 Terpenoid cylases/protein prenyltransferase al... 91 2e-19
Os04g0341500 Terpenoid cylases/protein prenyltransferase al... 91 2e-19
Os03g0348200 Terpene synthase-like domain containing protein 81 2e-16
Os03g0361100 Terpenoid cylases/protein prenyltransferase al... 77 3e-15
Os03g0361600 74 2e-14
Os03g0362000 72 1e-13
Os03g0361700 Terpene synthase-like domain containing protein 71 1e-13
Os07g0218200 Terpenoid cylases/protein prenyltransferase al... 69 1e-12
Os03g0361500 Terpenoid cylases/protein prenyltransferase al... 64 3e-11
>Os04g0344100 Terpene synthase-like domain containing protein
Length = 99
Score = 200 bits (508), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD
Sbjct: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
Query: 61 FNLLQHIHLEELKAISEYAYLSISLRILHWINNMRLCAS 99
FNLLQHIHLEELKAISEYAYLSISLRILHWINNMRLCAS
Sbjct: 61 FNLLQHIHLEELKAISEYAYLSISLRILHWINNMRLCAS 99
>Os04g0344400
Length = 505
Score = 134 bits (338), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 77/89 (86%), Gaps = 5/89 (5%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HL+LMSQD+VLNPPLA QV+RAL+LPLPRTFKRVETICYM Y+ E GNIP+LL+LA+LD
Sbjct: 156 HLKLMSQDNVLNPPLACQVRRALTLPLPRTFKRVETICYMLEYQLEEGNIPILLDLARLD 215
Query: 61 FNLLQHIHLEELKAISE-----YAYLSIS 84
FNLLQHIHL+ELKAISE Y Y+ +S
Sbjct: 216 FNLLQHIHLKELKAISEWWKDLYGYMGLS 244
>Os04g0341800 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 507
Score = 108 bits (271), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 68/89 (76%), Gaps = 5/89 (5%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HL +S + LNP L +Q+ RAL +PLPRT++R+ET+CYM Y +E G+IP+LLELA LD
Sbjct: 132 HLASLSSGTDLNPHLIDQINRALDVPLPRTYRRMETLCYMPEYRQEEGHIPILLELAMLD 191
Query: 61 FNLLQHIHLEELKAISE-----YAYLSIS 84
FNLLQH+HL+ELKAISE Y Y+ +S
Sbjct: 192 FNLLQHVHLKELKAISEWWKDLYGYMGLS 220
>Os04g0338600
Length = 490
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 62/78 (79%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLE M DSVL PLA+QVK A+ LPLPRT KRVE + YM Y+++ G+ P+LLELAKLD
Sbjct: 138 HLESMIWDSVLKGPLADQVKHAIRLPLPRTLKRVEMLHYMFEYDQDNGHNPVLLELAKLD 197
Query: 61 FNLLQHIHLEELKAISEY 78
FNLLQH+HL+ELK IS +
Sbjct: 198 FNLLQHVHLKELKEISRW 215
>Os05g0309900
Length = 199
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 63/79 (79%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HL+ + S L PPLA+QVKRAL LPLPR +KR+E + YM Y +E G+I +LL+LAKL+
Sbjct: 111 HLQSICDSSELKPPLADQVKRALDLPLPRAYKRMEALHYMFEYGQEEGHIVVLLDLAKLE 170
Query: 61 FNLLQHIHLEELKAISEYA 79
FNLLQH+HL+ELK+ S+YA
Sbjct: 171 FNLLQHVHLKELKSFSQYA 189
>Os04g0339500
Length = 523
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLE ++ +VL PLA+QVKRAL LPLPRT +RVE + YM Y RE G+ P++LELAKLD
Sbjct: 146 HLESFNRRNVLKAPLADQVKRALHLPLPRTHRRVEMVSYMFEYGREDGHNPVILELAKLD 205
Query: 61 FNLLQHIHLEELKAISEY-----AYLSIS 84
FNLLQ +HL+ELK IS + Y+ I+
Sbjct: 206 FNLLQRVHLKELKEISRWWKDVSGYMGIN 234
>Os04g0338400
Length = 517
Score = 98.6 bits (244), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 60/78 (76%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLE MS SVL PLA+QVKR L LPLPRT KRVE + YM Y++E + P+LLELAKLD
Sbjct: 139 HLESMSSHSVLKAPLADQVKRHLRLPLPRTHKRVEMLHYMFEYDQENEHNPVLLELAKLD 198
Query: 61 FNLLQHIHLEELKAISEY 78
FNLLQ +HL+ELK IS +
Sbjct: 199 FNLLQQVHLKELKEISRW 216
>Os05g0258800
Length = 339
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLELM L PPLA+Q+ RAL LPLPR +KR+ET+ YM Y +E G+ LL+LAKL+
Sbjct: 32 HLELMRGGGGLKPPLADQINRALDLPLPRAYKRIETLHYMLEYGQEEGHNVDLLDLAKLE 91
Query: 61 FNLLQHIHLEELKAISE-----YAYLSIS 84
FNLLQH+HL+EL+ S+ Y Y+ +S
Sbjct: 92 FNLLQHVHLKELRNFSQWWKNIYGYVQLS 120
>Os04g0345400 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 504
Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 63/78 (80%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HL+ M Q + L PL++QVKRAL+ PLPRT KR ET+ Y+S Y +E G++ +LL+LAK++
Sbjct: 132 HLKSMMQGNNLKHPLSDQVKRALNTPLPRTSKRTETLHYLSEYGQEEGHMSILLDLAKVE 191
Query: 61 FNLLQHIHLEELKAISEY 78
FNLLQ +HL+ELKAISE+
Sbjct: 192 FNLLQGVHLKELKAISEW 209
>Os04g0340300 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 599
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLE M S L PL Q+ RAL LPLPRT+KRVE + YM Y +E I +LL+LAKL+
Sbjct: 225 HLESMRDGSRLKAPLDNQINRALHLPLPRTYKRVEMLHYMLEYGQEEECIVVLLDLAKLE 284
Query: 61 FNLLQHIHLEELKAISE-----YAYLSIS 84
FNLLQH+HL+ELKA S+ Y Y+ +S
Sbjct: 285 FNLLQHVHLKELKAFSQWWKDLYGYVELS 313
>Os04g0341500 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 584
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLE M S L PL Q+ RAL LPLPRT+KRVE + YM Y +E I +LL+LAKL+
Sbjct: 210 HLESMRDGSRLKAPLDNQINRALHLPLPRTYKRVEMLHYMLEYGQEEECIVVLLDLAKLE 269
Query: 61 FNLLQHIHLEELKAISE-----YAYLSIS 84
FNLLQH+HL+ELKA S+ Y Y+ +S
Sbjct: 270 FNLLQHVHLKELKAFSQWWKDLYGYVELS 298
>Os03g0348200 Terpene synthase-like domain containing protein
Length = 544
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYE-REVGNIPLLLELAKL 59
HLELM S L PLAEQV RAL +PL R KRVE + Y+ Y E P +LELAKL
Sbjct: 172 HLELMK--SNLKSPLAEQVSRALQIPLSRNLKRVEALSYILEYNVHEQTYNPSILELAKL 229
Query: 60 DFNLLQHIHLEELKAISEY 78
DFNLLQHIH ELK I+++
Sbjct: 230 DFNLLQHIHQRELKTITQW 248
>Os03g0361100 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 577
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HLE +S + L PLAEQV RA +PLPR +R+ET+ Y+ YE+E + +LLELA+L+
Sbjct: 194 HLEALSMEGELKSPLAEQVSRAPDIPLPRFPRRLETMSYLVEYEQEDEHDDMLLELARLE 253
Query: 61 FNLLQHIHLEELKAIS 76
F L + +HLEELKA+S
Sbjct: 254 FELTRCLHLEELKALS 269
>Os03g0361600
Length = 579
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLD 60
HL M L P+AEQV RAL +PLPRT +R+E + Y+ Y E G ++LELA+LD
Sbjct: 213 HLRSMKTAGKLRSPMAEQVSRALDIPLPRTPRRLEAMRYIHEYGDEPGFDGVVLELARLD 272
Query: 61 FNLLQHIHLEELKAIS 76
F L++ +HL ELKA++
Sbjct: 273 FELVKSLHLRELKALT 288
>Os03g0362000
Length = 226
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 4 LMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLDFNL 63
L S L P+AEQV RAL +PLPR +R+ET+ Y++ YE E + LELAKLDF L
Sbjct: 153 LRSIQGKLRLPMAEQVSRALDIPLPRAPRRLETVRYIAEYEHEPAFDGVALELAKLDFEL 212
Query: 64 LQHIHLEELKAIS 76
++ +HL ELKA++
Sbjct: 213 VRSLHLRELKALT 225
>Os03g0361700 Terpene synthase-like domain containing protein
Length = 505
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 53/73 (72%)
Query: 4 LMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLDFNL 63
L S L P+A+QV RAL +PLPR K +ET+ Y++ YE+E + ++LELA+LDF L
Sbjct: 133 LQSLQGALRSPMAKQVSRALDIPLPRAPKLLETMHYITEYEQEAAHDGMVLELARLDFEL 192
Query: 64 LQHIHLEELKAIS 76
++ ++L+ELKA+S
Sbjct: 193 VRSLYLKELKALS 205
>Os07g0218200 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 508
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 1 HLELMSQDSVLNPPLAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNI-PLLLELAKL 59
HL+L+ + L PL EQV RAL +PLPRT KRVE + Y+ Y E P +LELA L
Sbjct: 162 HLQLLRGN--LAYPLDEQVTRALEIPLPRTMKRVEVLNYIFEYSAEEKMFNPSILELAVL 219
Query: 60 DFNLLQHIHLEELKAISEY 78
DFN+LQ +H ELK I ++
Sbjct: 220 DFNILQKVHQNELKEICQW 238
>Os03g0361500 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
domain containing protein
Length = 323
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 47/62 (75%)
Query: 15 LAEQVKRALSLPLPRTFKRVETICYMSAYEREVGNIPLLLELAKLDFNLLQHIHLEELKA 74
+AEQV RAL +PL R K +ET+ Y++ YERE + ++LELA+LDF L++ ++L+ELK
Sbjct: 1 MAEQVSRALDIPLARAPKLLETMRYITEYEREEAHDGVVLELARLDFELIRPLYLKELKT 60
Query: 75 IS 76
+S
Sbjct: 61 LS 62
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,061,716
Number of extensions: 99562
Number of successful extensions: 257
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 255
Number of HSP's successfully gapped: 19
Length of query: 99
Length of database: 17,035,801
Length adjustment: 68
Effective length of query: 31
Effective length of database: 13,485,249
Effective search space: 418042719
Effective search space used: 418042719
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)