Os03g0361100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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Os03g0361100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.47 | 0.647 | 6.38 | 0.0875 | 1.01 | 2.39 | -2.02 | -0.374 | -0.412 | 22 | 24.9 | 718 | -- | -- |
| 189.63 | 0.641 | 6.39 | 0.0271 | 1.01 | 2.42 | -1.93 | -- | -0.425 | 22 | 24.8 | 718 | -- | -- |
| 202.69 | 0.663 | 6.41 | -0.0359 | 1.02 | 2.52 | -- | 0.905 | -0.462 | 22.5 | 24.64 | 817 | -- | -- |
| 203.87 | 0.665 | 6.39 | 0.107 | 1.01 | 2.4 | -- | -- | -0.43 | 22.5 | 24.85 | 836 | -- | -- |
| 234.18 | 0.713 | 6.36 | 0.238 | -- | 2.62 | -- | -0.205 | -0.395 | -- | 24 | 1651 | -- | -- |
| 276.07 | 0.779 | 6.5 | -0.648 | 0.678 | -- | -1.87 | -- | -0.924 | 21.9 | -- | -- | -- | -- |
| 289.16 | 0.796 | 6.49 | -0.579 | 0.685 | -- | -- | -- | -0.923 | 22.4 | -- | -- | -- | -- |
| 234.25 | 0.713 | 6.36 | 0.219 | -- | 2.57 | -- | -- | -0.414 | -- | 24.06 | 1642 | -- | -- |
| 204.15 | 0.665 | 6.39 | -- | 1.01 | 2.37 | -- | -- | -0.444 | 22.5 | 24.88 | 833 | -- | -- |
| 317.78 | 0.833 | 6.48 | -0.568 | -- | -- | -- | -- | -0.92 | -- | -- | -- | -- | -- |
| 298 | 0.808 | 6.48 | -- | 0.682 | -- | -- | -- | -0.858 | 22.3 | -- | -- | -- | -- |
| 235.29 | 0.714 | 6.37 | -- | -- | 2.44 | -- | -- | -0.455 | -- | 24.16 | 1632 | -- | -- |
| 326.3 | 0.843 | 6.46 | -- | -- | -- | -- | -- | -0.857 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 22 |
| 2 | 188.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 11 | 189.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 22 |
| 12 | 189.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 26 | 189.50 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 39 | 189.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 50 | 190.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 76 | 190.93 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 78 | 191.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 85 | 191.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 108 | 191.64 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 154 | 192.46 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 166 | 192.62 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 197 | 193.05 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 244 | 193.55 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 375 | 194.65 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 385 | 194.76 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 418 | 194.97 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 429 | 195.06 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 435 | 195.11 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 445 | 195.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 456 | 195.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 504 | 195.44 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 515 | 195.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 675 | 196.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 704 | 196.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 774 | 196.82 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 942 | 197.41 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 960 | 197.47 | wind | 5 | 43200 | > th | dose independent | sin | 14 | NA |