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Os03g0348200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Terpene synthase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.43 (0.0585) R2 : 0.736
β1 : 0.586 (0.255) R2dD : 0.00552 R2D : -0.0425
β2 : 3.56 (0.136) R2dC : 0.407 R2C : 0.315
β3 : -7.81 (0.446) R2dE : 0.431 R2E : 0.168
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -9.11 (1.5) R2dD*E : 0.0774 R2D*E : -0.26
γ1 : 1.27 (0.122) R2dN8 : 0.0954 R2N8 : 0.131
σ : 1
deviance : 461.83
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_____
C
peak time of C : 3.69
E
wheather : radiation
threshold : 0.7623
memory length : 1471
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
461.64 1.01 9.43 0.636 3.58 -7.79 0.347 -9.35 1.27 3.7 0.7698 1472 -- --
499.62 1.04 9.57 -0.241 3.58 -5.83 0.000943 -- 1.13 3.77 0.9141 1473 -- --
461.83 1 9.43 0.586 3.56 -7.81 -- -9.11 1.27 3.69 0.7623 1471 -- --
499.53 1.04 9.57 -0.233 3.56 -5.8 -- -- 1.14 3.79 0.9141 1471 -- --
1024.28 1.49 9.33 1.14 -- -7.97 -- -11.8 1.5 -- 0.49 1418 -- --
833.63 1.35 9.39 1.12 3.37 -- 0.836 -- 1.86 4.28 -- -- -- --
835.54 1.35 9.4 1.11 3.37 -- -- -- 1.85 4.26 -- -- -- --
1067.71 1.52 9.58 -0.0175 -- -5.49 -- -- 1.2 -- 1.58 1402 -- --
500.8 1.04 9.56 -- 3.55 -5.68 -- -- 1.18 3.8 0.9147 1471 -- --
1448.8 1.78 9.42 1.24 -- -- -- -- 1.94 -- -- -- -- --
868.04 1.38 9.42 -- 3.39 -- -- -- 1.73 4.25 -- -- -- --
1067.67 1.52 9.58 -- -- -5.46 -- -- 1.22 -- 1.58 1402 -- --
1489.69 1.8 9.45 -- -- -- -- -- 1.8 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 470.32 radiation 1.0 1440 < th dose dependent rect. 18 23
2 476.14 radiation 1.0 1440 < th dose dependent rect. 7 23
3 478.14 radiation 1.0 1440 < th dose dependent rect. 5 22
4 478.16 radiation 1.0 1440 < th dose dependent rect. 23 22
7 478.23 radiation 1.0 1440 < th dose dependent rect. 2 23
8 478.24 radiation 1.0 1440 < th dose dependent rect. 10 23
9 478.25 radiation 1.0 1440 < th dose dependent rect. 20 23
12 478.28 radiation 1.0 1440 < th dose dependent rect. 2 19
15 478.31 radiation 1.0 1440 < th dose dependent rect. 5 20
17 478.34 radiation 1.0 1440 < th dose dependent rect. 5 16
18 478.36 radiation 1.0 1440 < th dose dependent no NA NA
30 478.49 radiation 1.0 1440 < th dose dependent rect. 2 17
42 478.56 radiation 1.0 1440 < th dose dependent rect. 5 14
69 480.37 radiation 1.0 1440 < th dose dependent rect. 16 23
77 482.53 humidity 90.0 43200 > th dose independent rect. 20 3
81 483.30 radiation 1.0 1440 < th dose dependent sin 0 NA
107 488.44 radiation 1.0 1440 < th dose dependent sin 14 NA
111 488.65 humidity 90.0 43200 < th dose independent rect. 20 1
115 488.89 humidity 90.0 43200 < th dose independent rect. 19 4
151 493.57 humidity 90.0 43200 < th dose independent rect. 22 1
156 494.91 humidity 90.0 43200 > th dose dependent rect. 21 2
174 498.30 radiation 1.0 14400 < th dose dependent rect. 1 4
182 499.80 humidity 80.0 43200 < th dose independent rect. 13 1
185 500.14 humidity 80.0 43200 > th dose independent rect. 12 2
267 505.07 radiation 1.0 1440 < th dose dependent rect. 13 14
271 505.20 wind 5.0 43200 > th dose dependent rect. 11 10
276 505.31 radiation 1.0 1440 < th dose dependent rect. 13 12
286 505.61 radiation 1.0 1440 < th dose dependent rect. 13 8
291 505.83 radiation 1.0 14400 < th dose dependent rect. 22 7
292 505.84 radiation 1.0 1440 < th dose dependent rect. 13 6
299 505.96 radiation 1.0 14400 < th dose dependent rect. 20 9
340 508.86 temperature 25.0 4320 < th dose independent rect. 17 1
353 509.78 temperature 25.0 4320 > th dose independent rect. 17 1
357 510.03 wind 7.0 43200 < th dose independent rect. 10 11
370 511.29 humidity 90.0 43200 < th dose independent rect. 9 1
378 512.16 wind 7.0 43200 > th dose independent rect. 9 12
411 513.24 humidity 90.0 43200 > th dose independent rect. 9 1
419 513.53 humidity 80.0 43200 > th dose dependent rect. 10 1
420 513.65 temperature 25.0 4320 > th dose independent rect. 10 1
430 514.08 wind 7.0 43200 < th dose independent sin 21 NA
440 514.51 wind 7.0 43200 < th dose independent rect. 13 8
452 515.21 wind 7.0 43200 < th dose dependent rect. 11 1
457 515.26 radiation 1.0 14400 < th dose dependent rect. 18 3
458 515.31 wind 7.0 43200 > th dose independent sin 21 NA
460 515.34 radiation 1.0 14400 < th dose dependent rect. 18 6
466 515.40 radiation 1.0 14400 < th dose dependent rect. 18 1
485 515.85 radiation 40.0 43200 > th dose dependent rect. 10 1
496 516.42 wind 7.0 43200 < th dose independent rect. 5 16
497 516.44 wind 7.0 43200 > th dose independent rect. 13 8
509 516.60 wind 7.0 43200 > th dose independent rect. 5 16
513 516.72 wind 7.0 43200 < th dose independent rect. 11 14
538 517.25 wind 1.0 43200 > th dose dependent rect. 11 1
539 517.27 wind 7.0 43200 < th dose independent rect. 5 13
559 517.69 wind 7.0 43200 > th dose independent rect. 5 13
566 517.87 wind 7.0 43200 < th dose independent rect. 14 4
572 517.94 radiation 1.0 1440 < th dose dependent rect. 18 3
575 518.05 radiation 1.0 1440 < th dose dependent rect. 18 9
576 518.06 radiation 20.0 14400 < th dose dependent rect. 20 9
582 518.20 radiation 1.0 14400 > th dose independent rect. 18 1
594 518.27 wind 7.0 43200 > th dose independent rect. 10 15
595 518.30 wind 5.0 43200 > th dose dependent sin 19 NA
596 518.32 radiation 1.0 14400 < th dose independent rect. 18 3
597 518.35 radiation 1.0 14400 < th dose independent rect. 18 9
602 518.41 radiation 1.0 14400 < th dose independent rect. 18 6
615 518.64 humidity 90.0 43200 > th dose independent rect. 18 18
617 518.69 radiation 1.0 14400 < th dose independent rect. 18 1
631 518.91 radiation 1.0 1440 < th dose dependent rect. 18 7
640 519.10 radiation 1.0 1440 < th dose dependent rect. 18 1
670 519.68 wind 7.0 43200 > th dose independent rect. 14 4
671 519.68 radiation 40.0 43200 < th dose dependent rect. 20 9
684 520.00 humidity 90.0 43200 > th dose dependent rect. 19 17
685 520.02 temperature 25.0 4320 < th dose independent rect. 10 1
707 520.45 wind 9.0 43200 > th dose independent rect. 19 2
793 521.66 radiation 40.0 43200 < th dose independent rect. 10 1
799 521.71 wind 3.0 43200 > th dose dependent rect. 20 1
800 521.74 atmosphere 1005.0 43200 < th dose independent rect. 16 1
830 522.20 wind 7.0 43200 > th dose independent rect. 14 2
832 522.22 atmosphere 1005.0 43200 < th dose independent rect. 18 1
852 522.53 precipitation 0.1 14400 > th dose dependent rect. 5 2
864 522.74 humidity 90.0 43200 < th dose independent sin 17 NA
871 522.83 atmosphere 1005.0 43200 > th dose independent rect. 16 1
897 523.03 humidity 90.0 43200 < th dose independent rect. 8 18
900 523.06 wind 9.0 43200 < th dose independent rect. 19 2
907 523.09 radiation 1.0 1440 < th dose independent rect. 5 22
916 523.16 radiation 1.0 1440 < th dose independent rect. 5 16
924 523.23 radiation 1.0 1440 < th dose independent rect. 5 20
929 523.27 atmosphere 1005.0 43200 > th dose independent rect. 18 1
937 523.31 radiation 1.0 1440 < th dose independent rect. 5 14
940 523.32 radiation 1.0 14400 > th dose dependent rect. 18 1
965 523.43 humidity 90.0 43200 > th dose independent sin 16 NA
980 523.53 wind 7.0 43200 > th dose independent rect. 24 18
986 523.60 humidity 90.0 43200 > th dose dependent sin 16 NA
987 523.62 humidity 70.0 14400 < th dose independent rect. 18 14
990 523.63 radiation 1.0 1440 < th dose independent rect. 10 23