Os04g0344100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpene synthase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0344100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Terpene synthase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 452.93 | 1 | 4.42 | -0.141 | 0.816 | 0.157 | -0.533 | 2.61 | 0.185 | 18.8 | 1 | 1675 | -- | -- |
| 461.39 | 1 | 4.33 | -0.0094 | 0.833 | 0.654 | -0.156 | -- | 0.234 | 18.3 | 0.8 | 809 | -- | -- |
| 453.62 | 0.992 | 4.42 | -0.129 | 0.815 | 0.161 | -- | 2.52 | 0.184 | 18.9 | 1.015 | 1675 | -- | -- |
| 460.94 | 1 | 4.35 | 0.055 | 0.799 | 0.837 | -- | -- | 0.179 | 18.2 | 0.9 | 808 | -- | -- |
| 486.76 | 1.03 | 4.4 | -0.128 | -- | 0.374 | -- | 2.64 | 0.185 | -- | 1 | 1747 | -- | -- |
| 469.36 | 1.02 | 4.34 | -0.143 | 0.852 | -- | -0.137 | -- | 0.251 | 18.7 | -- | -- | -- | -- |
| 469.4 | 1.01 | 4.34 | -0.141 | 0.851 | -- | -- | -- | 0.251 | 18.7 | -- | -- | -- | -- |
| 478.79 | 1.02 | 4.32 | 0.0337 | -- | 0.725 | -- | -- | 0.204 | -- | 3.5 | 348 | -- | -- |
| 460.91 | 1 | 4.35 | -- | 0.788 | 0.818 | -- | -- | 0.155 | 18.3 | 0.8998 | 808 | -- | -- |
| 507.22 | 1.05 | 4.32 | -0.161 | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
| 469.93 | 1.01 | 4.33 | -- | 0.853 | -- | -- | -- | 0.267 | 18.7 | -- | -- | -- | -- |
| 478.85 | 1.02 | 4.32 | -- | -- | 0.743 | -- | -- | 0.211 | -- | 3.5 | 348 | -- | -- |
| 507.9 | 1.05 | 4.32 | -- | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 440.53 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 3 | 441.24 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 5 | 441.90 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 7 | 442.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 8 | 442.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 9 | 442.38 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 10 | 442.52 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 13 | 443.18 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 14 | 443.22 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 19 | 443.68 | wind | 3.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 20 | 443.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 21 | 443.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 37 | 444.55 | wind | 3.0 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 42 | 444.74 | wind | 3.0 | 1440 | < th | dose independent | rect. | 23 | 14 |
| 49 | 444.99 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 56 | 445.17 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 59 | 445.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 8 |
| 61 | 445.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 6 |
| 62 | 445.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 64 | 445.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 79 | 445.59 | wind | 3.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 85 | 445.75 | wind | 3.0 | 720 | > th | dose independent | rect. | 11 | 2 |
| 102 | 445.97 | wind | 3.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 138 | 446.54 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 20 | 14 |
| 156 | 446.86 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 23 | 11 |
| 185 | 447.19 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 187 | 447.21 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 193 | 447.28 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 200 | 447.32 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 239 | 447.59 | wind | 3.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 243 | 447.63 | wind | 3.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 249 | 447.70 | wind | 3.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 269 | 447.84 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 314 | 448.12 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 20 | 17 |
| 328 | 448.18 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 18 | 19 |
| 340 | 448.30 | wind | 3.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 397 | 448.61 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 420 | 448.74 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 465 | 448.97 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 508 | 449.20 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 549 | 449.36 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 583 | 449.51 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 591 | 449.54 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 607 | 449.59 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 622 | 449.65 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 12 | 2 |
| 627 | 449.67 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 660 | 449.79 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 681 | 449.84 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 685 | 449.86 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 712 | 449.92 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 742 | 450.00 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 17 |
| 755 | 450.04 | wind | 3.0 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 766 | 450.07 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 773 | 450.08 | wind | 9.0 | 1440 | < th | dose dependent | sin | 9 | NA |
| 797 | 450.15 | wind | 3.0 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 804 | 450.17 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 878 | 450.40 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 893 | 450.46 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 894 | 450.46 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 897 | 450.47 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 908 | 450.50 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 975 | 450.66 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 976 | 450.66 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 22 |