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Os04g0341800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.12 (0.0555) R2 : 0.52
β1 : -2.49 (0.239) R2dD : 0.173 R2D : 0.0438
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.54 (0.141) R2dE : 0.371 R2E : 0.347
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6.48 (0.888) R2dD*E : 0.0811 R2D*E : -0.0598
γ1 : 0.405 (0.123) R2dN8 : 0.017 R2N8 : 0.0671
σ : 1.01
deviance : 470.86
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C
peak time of C : --
E
wheather : temperature
threshold : 18.6
memory length : 715
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.69
open length of G : 0.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
456.23 1 7.08 -2.54 0.76 2.06 0.481 -7.01 0.447 15 19.23 717 6.24 0.817
504.34 1.05 7.02 -1.36 0.843 1.79 -1.36 -- 0.713 13.6 20.06 725 6.27 0.717
456.61 0.995 7.08 -2.48 0.744 2.08 -- -6.72 0.461 14.9 19.2 715 6.27 0.817
510.91 1.05 7.01 -1.4 0.808 1.86 -- -- 0.663 13.8 20.26 720 6.28 0.733
470.86 1.01 7.12 -2.49 -- 2.54 -- -6.48 0.405 -- 18.6 715 6.69 0.4
613.43 1.16 6.87 -1.1 1.81 -- -1.02 -- 1.15 13.4 -- -- -- --
617.59 1.16 6.88 -1.13 1.82 -- -- -- 1.14 13.5 -- -- -- --
512.38 1.05 6.99 -1.5 -- 2.23 -- -- 0.706 -- 16.38 735 6.72 0.0253
561.08 1.1 6.96 -- 0.888 1.77 -- -- 0.906 14 20.8 716 6.32 0.765
820.26 1.34 6.9 -1.21 -- -- -- -- 1.1 -- -- -- -- --
651.45 1.19 6.85 -- 1.84 -- -- -- 1.27 13.5 -- -- -- --
571.41 1.11 6.96 -- -- 2.22 -- -- 0.852 -- 16.34 735 6.73 0.0168
858.61 1.37 6.87 -- -- -- -- -- 1.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 464.11 temperature 20.0 720 > th dose dependent rect. 6 1
2 470.32 temperature 20.0 720 > th dose dependent rect. 3 5
6 477.50 temperature 20.0 720 > th dose independent rect. 6 1
38 488.00 temperature 30.0 14400 > th dose independent rect. 16 1
44 488.32 temperature 20.0 720 > th dose dependent rect. 21 13
46 488.59 temperature 30.0 14400 > th dose independent rect. 15 3
47 488.62 temperature 30.0 14400 < th dose independent rect. 16 2
72 491.62 temperature 15.0 720 > th dose dependent sin 7 NA
73 491.63 radiation 1.0 43200 < th dose independent rect. 19 11
74 491.69 radiation 1.0 43200 > th dose independent rect. 4 2
76 491.69 radiation 1.0 43200 < th dose independent rect. 3 3
79 491.69 radiation 1.0 43200 < th dose independent rect. 1 5
86 491.74 radiation 1.0 43200 < th dose independent rect. 23 7
88 491.76 radiation 1.0 43200 < th dose independent rect. 21 9
115 492.44 temperature 30.0 14400 < th dose independent rect. 15 16
117 492.48 temperature 30.0 14400 < th dose independent rect. 15 7
119 492.50 temperature 30.0 14400 < th dose independent rect. 15 9
120 492.50 temperature 30.0 14400 < th dose independent rect. 15 11
143 492.74 wind 1.0 43200 > th dose dependent rect. 23 14
165 493.17 radiation 1.0 14400 > th dose independent rect. 17 13
181 493.69 wind 9.0 43200 < th dose dependent rect. 23 14
183 493.86 wind 3.0 43200 > th dose dependent rect. 5 8
186 493.94 wind 1.0 43200 > th dose dependent rect. 3 10
213 494.38 wind 9.0 43200 < th dose dependent rect. 3 10
237 494.71 temperature 30.0 14400 > th dose independent sin 14 NA
270 495.05 temperature 30.0 14400 < th dose independent sin 14 NA
274 495.07 humidity 90.0 43200 > th dose dependent rect. 17 3
327 495.41 temperature 30.0 14400 > th dose dependent rect. 14 2
345 495.70 temperature 30.0 14400 < th dose independent rect. 12 19
347 495.72 temperature 30.0 14400 < th dose independent rect. 12 10
351 495.73 temperature 30.0 14400 < th dose independent rect. 12 12
352 495.73 temperature 30.0 14400 < th dose independent rect. 12 14
381 495.85 wind 1.0 43200 > th dose dependent rect. 23 10
404 496.04 humidity 90.0 43200 > th dose dependent rect. 15 6
405 496.06 wind 3.0 43200 < th dose dependent rect. 3 2
447 496.41 wind 1.0 43200 > th dose dependent sin 7 NA
452 496.48 temperature 10.0 720 > th dose dependent sin 5 NA
473 496.76 radiation 1.0 14400 < th dose independent rect. 17 1
476 496.80 radiation 20.0 14400 > th dose dependent rect. 16 15
481 496.84 temperature 10.0 720 > th dose dependent rect. 23 16
485 496.88 radiation 20.0 14400 > th dose dependent rect. 16 1
502 496.91 wind 9.0 43200 < th dose dependent rect. 7 6
504 496.96 wind 9.0 43200 < th dose dependent rect. 24 4
511 497.03 humidity 90.0 43200 > th dose dependent rect. 11 10
513 497.10 wind 5.0 43200 < th dose dependent rect. 24 5
525 497.22 precipitation 0.1 43200 > th dose independent rect. 19 1
529 497.26 wind 9.0 43200 < th dose dependent sin 7 NA
534 497.34 wind 9.0 43200 < th dose dependent rect. 23 10
543 497.42 radiation 40.0 4320 < th dose independent rect. 1 8
547 497.46 radiation 1.0 14400 > th dose independent rect. 17 1
550 497.47 radiation 40.0 4320 < th dose independent rect. 3 6
582 497.68 temperature 20.0 43200 > th dose independent rect. 19 1
583 497.68 humidity 90.0 43200 > th dose dependent rect. 9 12
586 497.70 wind 1.0 43200 > th dose dependent rect. 3 6
587 497.70 humidity 70.0 43200 > th dose dependent rect. 7 9
588 497.71 humidity 70.0 43200 > th dose dependent rect. 8 6
611 497.78 wind 5.0 43200 < th dose independent rect. 6 7
622 497.85 temperature 30.0 14400 > th dose independent rect. 14 23
651 497.92 wind 1.0 43200 > th dose dependent rect. 24 6
656 497.94 wind 5.0 43200 > th dose dependent rect. 9 2
661 497.97 temperature 30.0 14400 < th dose independent rect. 14 23
667 498.05 wind 1.0 43200 > th dose dependent rect. 24 4
700 498.16 temperature 30.0 14400 > th dose independent rect. 12 1
716 498.26 temperature 30.0 14400 < th dose independent rect. 3 15
717 498.26 temperature 30.0 14400 < th dose independent rect. 1 17
718 498.26 temperature 30.0 14400 < th dose independent rect. 19 23
720 498.27 temperature 30.0 14400 < th dose independent rect. 23 19
721 498.27 temperature 30.0 14400 < th dose independent rect. 21 21
729 498.29 temperature 30.0 14400 < th dose independent rect. 6 12
740 498.32 radiation 40.0 4320 < th dose independent rect. 23 10
756 498.41 humidity 70.0 43200 > th dose dependent rect. 9 4
761 498.44 wind 5.0 43200 > th dose independent rect. 6 7
767 498.47 wind 1.0 43200 > th dose dependent rect. 21 9
773 498.49 wind 5.0 43200 > th dose independent rect. 7 5
780 498.55 temperature 30.0 14400 < th dose independent rect. 12 1
822 498.72 radiation 40.0 4320 < th dose independent rect. 21 12
823 498.72 radiation 40.0 4320 < th dose independent rect. 19 14
851 498.83 wind 9.0 43200 < th dose dependent rect. 3 6
868 498.89 wind 3.0 43200 > th dose dependent rect. 5 1
870 498.91 wind 9.0 43200 < th dose dependent rect. 21 9
883 498.97 precipitation 0.1 43200 < th dose independent rect. 19 1
884 498.97 precipitation 0.1 43200 < th dose dependent rect. 19 1
892 499.05 temperature 30.0 14400 > th dose independent no NA NA