BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0193300 Os04g0193300|AK106803
(405 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0193300 Cyclin-like F-box domain containing protein 757 0.0
Os04g0194000 Cyclin-like F-box domain containing protein 395 e-110
Os04g0191800 Cyclin-like F-box domain containing protein 379 e-105
Os04g0191600 F-box associated type 1 domain containing protein 283 1e-76
Os10g0124500 Cyclin-like F-box domain containing protein 199 5e-51
Os10g0391200 Cyclin-like F-box domain containing protein 198 7e-51
Os04g0195100 Cyclin-like F-box domain containing protein 185 5e-47
Os12g0128000 Cyclin-like F-box domain containing protein 185 7e-47
Os11g0131300 155 6e-38
Os02g0543200 Cyclin-like F-box domain containing protein 117 1e-26
Os02g0131900 98 1e-20
Os02g0132700 94 2e-19
>Os04g0193300 Cyclin-like F-box domain containing protein
Length = 405
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/383 (95%), Positives = 367/383 (95%)
Query: 23 GDSETMGKAARTXXXXXXXXXXXXIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLL 82
GDSETMGKAART IVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLL
Sbjct: 23 GDSETMGKAARTGLPPRRRGLPEEIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLL 82
Query: 83 THHRHQPTLPLVDRYKCNEEFLLGIVSLDRRAAAARLQPVAQLDDTCYMMSADASCDGXX 142
THHRHQPTLPLVDRYKCNEEFLLGIVSLDRRAAAARLQPVAQLDDTCYMMSADASCDG
Sbjct: 83 THHRHQPTLPLVDRYKCNEEFLLGIVSLDRRAAAARLQPVAQLDDTCYMMSADASCDGLL 142
Query: 143 XXSIGGIWWFICNPITRQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPG 202
SIGGIWWFICNPITRQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPG
Sbjct: 143 LLSIGGIWWFICNPITRQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPG 202
Query: 203 DRNTCYVYTLGSSDVPRCIGWPETSASGATVVLHCSLHWYQRSQDMILVFDTTAESFRWM 262
DRNTCYVYTLGSSDVPRCIGWPETSASGATVVLHCSLHWYQRSQDMILVFDTTAESFRWM
Sbjct: 203 DRNTCYVYTLGSSDVPRCIGWPETSASGATVVLHCSLHWYQRSQDMILVFDTTAESFRWM 262
Query: 263 RAPSDRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPE 322
RAPSDRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPE
Sbjct: 263 RAPSDRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPE 322
Query: 323 IRGMLGGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLK 382
IRGMLGGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLK
Sbjct: 323 IRGMLGGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLK 382
Query: 383 PSLVQHAFFPLLDSYAVNASPFI 405
PSLVQHAFFPLLDSYAVNASPFI
Sbjct: 383 PSLVQHAFFPLLDSYAVNASPFI 405
>Os04g0194000 Cyclin-like F-box domain containing protein
Length = 370
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/364 (58%), Positives = 253/364 (69%), Gaps = 16/364 (4%)
Query: 47 IVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVDRYKCNEEFLLG 106
+VVWEILVRLPPKPLLRCR VCRAWRRLTST FLL HHRHQP+LPLV Y C+ LL
Sbjct: 18 LVVWEILVRLPPKPLLRCRLVCRAWRRLTSTRGFLLAHHRHQPSLPLVVGYGCDGGSLLD 77
Query: 107 IVSLDRR-AAAARLQPVAQLDDTCYMMSADASCDGXXXXSI---GGIWWFICNPITRQFG 162
I++LDRR AA RL PV +L + + +SA SCDG ++ G ++ +CNP TRQF
Sbjct: 78 ILTLDRRDAARPRLHPVVRLKNAAHFVSA--SCDGILILNMTNCGEFYYSVCNPTTRQFA 135
Query: 163 ALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSDVPRCIG 222
L +L GF VMGFY+H PTG+YRLLLY DR CYVYTLGSS++PRCIG
Sbjct: 136 DLPMLTGFFVMGFYQHRPTGEYRLLLYYQFRPEGSE----DRYACYVYTLGSSEMPRCIG 191
Query: 223 WPETSAS-GATVVLHCSLHWYQRSQDMILVFDTTAESFRWMRAPSDRMKCTLDSGNLFDM 281
W E A+ A V+LH SLHWY D IL+F+T +ESF W +D+M + +LF++
Sbjct: 192 WMEEVATCTAVVLLHGSLHWYNYKTDKILIFNTASESF-WSMRQADKM----NGNDLFEI 246
Query: 282 DGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRGMLGGAYHWSAMVLSQE 341
DG LG+Y ND TIVDIWVLQDYK E WSLK+++ELPVP+I+G L WSAMVLS++
Sbjct: 247 DGTLGIYFCNDDATIVDIWVLQDYKTEFWSLKHRIELPVPDIKGKLDDGDDWSAMVLSED 306
Query: 342 GDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLKPSLVQHAFFPLLDSYAVNA 401
GDVLVLV +WL YI T+G LLASFQH + LKLK SLV HAFFPLL Y VNA
Sbjct: 307 GDVLVLVYYRQWLLYIGTDGKLLASFQHDVGCHYNTPLKLKQSLVPHAFFPLLKGYVVNA 366
Query: 402 SPFI 405
PFI
Sbjct: 367 RPFI 370
>Os04g0191800 Cyclin-like F-box domain containing protein
Length = 400
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/383 (54%), Positives = 257/383 (67%), Gaps = 28/383 (7%)
Query: 47 IVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVDRYKCNEE---F 103
+VVWEILVRLPPKPLLRCR VCRAWRRLTST DFLL HHRHQP+LPL+ C+ +
Sbjct: 22 LVVWEILVRLPPKPLLRCRLVCRAWRRLTSTRDFLLAHHRHQPSLPLI--AACDYADIMY 79
Query: 104 LLGIVSLD---RRAAAARLQPVAQLDDTCYMMSADASCDGXXXXS--IGGIWWFICNPIT 158
L+ +++L RR AAARL PVA+ T + D+SCDG S G + ICNP T
Sbjct: 80 LIDVLTLTLGRRRGAAARLHPVARYASTADYL--DSSCDGLLLISRNTGPPQYSICNPTT 137
Query: 159 RQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPG--DRNTCYVYTLGSSD 216
RQFG L L+ GFM +G Y+H PTGDYR+LLYR ++++ E LIPG +R+ YVYTLGS+D
Sbjct: 138 RQFGDLPLISGFMFLGLYQHSPTGDYRILLYRAEKVVLEDLIPGHVERDASYVYTLGSND 197
Query: 217 VPRCIGWPETSASGAT--------VVLHCS-LHWYQRSQDMILVFDTTAESFRWMRAPSD 267
+PR IGW E S LH S LHWY + MILVFDTTAESFRWMRAP D
Sbjct: 198 MPRRIGWAEPEVSMLAGHSRRCRPAQLHGSLLHWYHSIKHMILVFDTTAESFRWMRAPID 257
Query: 268 RMKCTLDS---GNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIR 324
+ + L+ ++ +MD LG+YC N TIV+IW LQDY++E+WS+KYQVELPV IR
Sbjct: 258 KTENELNRELWADVLEMDSTLGLYCCNHDKTIVNIWALQDYEQEVWSIKYQVELPVTCIR 317
Query: 325 GMLGGAYHWSAMVLSQEGD--VLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLK 382
G L WS MV S++GD V+VLV C + + DT+G LLA +H G+ + +KLK
Sbjct: 318 GELDVGDSWSVMVSSEDGDEVVVVLVDCGQSVLCFDTDGKLLARLEHDGNDIMVTRMKLK 377
Query: 383 PSLVQHAFFPLLDSYAVNASPFI 405
SLV HAFFPLL SY VN PFI
Sbjct: 378 QSLVPHAFFPLLKSYVVNDLPFI 400
>Os04g0191600 F-box associated type 1 domain containing protein
Length = 239
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/240 (60%), Positives = 176/240 (73%), Gaps = 6/240 (2%)
Query: 171 MVMGFYKHPPTGDYRLLLYRNQ----ELMSEHLIPGDRNTCYVYTLGSSDVPRCIGWPET 226
M+MG Y H PTG+YRLLLYR + E + + LIPGDRN CYVYTLGS D+PRCIGWPE
Sbjct: 1 MLMGLYWHRPTGEYRLLLYRIELPASERLVDVLIPGDRNACYVYTLGSGDLPRCIGWPEA 60
Query: 227 SASGATVVLHCSLHWYQRSQDMILVFDTTAESFRWMRAPSDRMKCTLDSGNLFDMDGKLG 286
A+GA+V+LH SLHWY+R +DMIL FD TAESFRWMR+P + G LF+++ LG
Sbjct: 61 EANGASVLLHGSLHWYKRIEDMILAFDITAESFRWMRSPFGKAVWRAFHG-LFEINCMLG 119
Query: 287 MYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRGMLGGAYH-WSAMVLSQEGDVL 345
MYC +DG T VDIWVL+DY+RE+WSLKY+VELPV EIR L +S MV S++GDVL
Sbjct: 120 MYCCDDGATFVDIWVLEDYEREVWSLKYRVELPVLEIRRELDVKRDLYSVMVSSEDGDVL 179
Query: 346 VLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLKPSLVQHAFFPLLDSYAVNASPFI 405
VLV+C R + YI T+G LLAS H DGL +KL+ SLV HAFFP L Y VNASPF+
Sbjct: 180 VLVNCKRAMLYIGTDGKLLASLPHDNDGLSITPVKLRASLVPHAFFPSLLDYVVNASPFV 239
>Os10g0124500 Cyclin-like F-box domain containing protein
Length = 457
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 190/370 (51%), Gaps = 53/370 (14%)
Query: 51 EILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVDRYK-----------C 99
EIL+RLP +L CR VCR+WR + ST FLL HHR QP PLV ++ C
Sbjct: 106 EILLRLPANSVLHCRAVCRSWRHIASTHAFLLRHHRRQPEFPLVTSFRNPAPADQWMPNC 165
Query: 100 NEEFLLGIVSLDRRAAAARLQPVAQLDDTCYMMSADASCDGXXXXSIGGIWWFICNPITR 159
+ LL S +RR + +P C ASCDG +GG +ICNP TR
Sbjct: 166 LDAILLR--SAERRPIFSFPRPF------CGGFPITASCDGLLI--VGG---YICNPTTR 212
Query: 160 QFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSDVPR 219
Q + ++G Y+H P+G+YR+L + + + SE P CY S+ PR
Sbjct: 213 QRAPISRWTIDNIVGLYRHEPSGEYRVLYFASSDTPSEVYCP----ICYCVLAVGSNKPR 268
Query: 220 ------------CIGWPETSASGATVVLHCS--LHWYQR---SQDMILVFDTTAESFRWM 262
IG P G V++H + LHW +R + ILVF+T AESFR +
Sbjct: 269 QIPCSVTPMDEEIIGAPGPMIFGRPVLIHGNLHLHWKKRRGTRYNRILVFNTVAESFRQL 328
Query: 263 RAPSDRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPE 322
R P+ + + L MDG L M S + + I++L+DY E+W +Y+++LP E
Sbjct: 329 RPPAVNPR---NYTRLLAMDGMLAMSVSKERVMDMSIFMLEDYDHEVWVFRYKIKLPTME 385
Query: 323 IRGMLGGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGL-KL 381
IR W A V+S+EGD +LVSC WL + D +GNL++ FQ Y D L I ++
Sbjct: 386 IRRFQDQG-DWWAEVVSEEGD--ILVSCFGWLLHCDNKGNLVSKFQ-YNDDLPAISPHRI 441
Query: 382 KPSLVQHAFF 391
K SL+QHAFF
Sbjct: 442 KESLIQHAFF 451
>Os10g0391200 Cyclin-like F-box domain containing protein
Length = 492
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 193/359 (53%), Gaps = 27/359 (7%)
Query: 47 IVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVDRYKCNEEFLLG 106
+V+ EILVRLP + +LRCR VC AWRRLTS FL HH Q LPL+ ++ +G
Sbjct: 149 MVLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLI-YFRRGGSDRVG 207
Query: 107 IVSLDRRAAAARLQPVAQLDDTCYMMSADASCDGXXXXSIGGIWWFICNPITRQFGALHL 166
+ L AA+L+PV + ASCDG S G ++ICNP T + +
Sbjct: 208 AIDLH----AAQLRPVVDHTWPPLGYTVIASCDGLLLLSSGR--FYICNPATNHWAEIPQ 261
Query: 167 LCGFMVMGFYKHPPTGDYRLLL--YRNQELMSEHLIP--GDRNTCYVYTLGSSDV--PRC 220
L +G Y H P+G+YR+L + +E H++ D C T+GS V P
Sbjct: 262 LVDADFLGLYPHNPSGEYRVLYGEFHGEEECVYHILTLGSDEPRCITMTMGSETVEQPLA 321
Query: 221 IGWPETSASGATVVLHCSLHWYQRSQD---MILVFDTTAESFRWMRAPSDRMKCTLDSGN 277
+ + +V++ +LHWY R +D I+VFDT +ESF+WMR P+ +
Sbjct: 322 REFLMHARGDRSVLVRGNLHWYLRHRDGGCKIMVFDTASESFQWMRHPA-----IPGWVS 376
Query: 278 LFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRGMLGGAYH---WS 334
L +MD L ++ + + T +D+WVLQDY+R W+ K+++ELP+ +IR WS
Sbjct: 377 LLEMDSTL-VFSAVECTTRIDLWVLQDYERSTWACKHRIELPMAQIRQFPECNLEHLGWS 435
Query: 335 AMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLKPSLVQHAFFPL 393
AMV+S EGD VLV C + + D +GN+LASFQ G +LK +LV H FF +
Sbjct: 436 AMVVSVEGD--VLVRCSNRILHCDRKGNVLASFQFDGQLPMNCLHRLKENLVVHPFFQM 492
>Os04g0195100 Cyclin-like F-box domain containing protein
Length = 382
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 187/369 (50%), Gaps = 48/369 (13%)
Query: 48 VVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLV---DRYKCNEEFL 104
+VWEIL RLP + LLRC VCR WRRL ++ DFLL HHRHQP PLV R++
Sbjct: 20 LVWEILARLPARGLLRCHAVCRDWRRLATSADFLLAHHRHQPPRPLVFGCARWRSGAAAD 79
Query: 105 LGIVSLDR---RAAAARLQPVAQLDDTCYM-MSADASCDGXXXXSIGGIWWFICNPITRQ 160
R A R + + D + +SCDG + G ++ICNP TRQ
Sbjct: 80 ADAAVDSVDLIRHPAERRRVLGFSDYRQHQSFKIHSSCDGLLLF-VSGRAFYICNPATRQ 138
Query: 161 FGALHLLC-GFMVMGFYKHPPTGD--YRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSDV 217
+ L G + Y HP +GD YR+L ++ + + + +GSS+
Sbjct: 139 VTPVPALTGGGSQVTLYPHPSSGDGEYRVLKWKYPDAVC------------ILAVGSSEK 186
Query: 218 PRCIGWPETSASGA----------TVVLHCSLHWYQRS-QDMILVFDTTAESFRWMRAPS 266
PR IG PE V+LH LHW+ R +D ILVFDT AESFRWM +P+
Sbjct: 187 PRRIGLPEAFLPPVFWIDEIGFLPPVLLHGCLHWHLRKPEDAILVFDTVAESFRWMVSPN 246
Query: 267 DRMKCTLDSGNLFDMDGK-LGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRG 325
+L ++DG LG+ G + +WVLQDY+ E+WSL+Y V+LPV +R
Sbjct: 247 ----VDGYGAHLVEIDGGMLGIGIVTQG--MAKLWVLQDYETEVWSLRYHVKLPVARMRS 300
Query: 326 ML-GGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLK--LK 382
+ G + W ++ G++LV + +LF DT+GNL + D + ++ LK
Sbjct: 301 IAREGFFSWK--IVCHRGEILVYIQSSVFLFLCDTKGNLREKI--HLDNMLPCAMRHCLK 356
Query: 383 PSLVQHAFF 391
SLV HAFF
Sbjct: 357 ESLVNHAFF 365
>Os12g0128000 Cyclin-like F-box domain containing protein
Length = 399
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 190/389 (48%), Gaps = 50/389 (12%)
Query: 48 VVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVD--RYKCNEEFLL 105
++ EIL+ LPPK +L+CR VC+AWR +TS FLLTHHR QP L+ R + L
Sbjct: 27 IMSEILLLLPPKSILQCRAVCKAWRDVTSDRAFLLTHHRRQPPQRLLTFIRDVGSHHDDL 86
Query: 106 GIVSLDRRAAAARLQPVAQL------DDTCYM----MSADASCDGXXXXSIGGIWWFICN 155
I+ A R L D C + + ASCDG S + +CN
Sbjct: 87 DILDYCVEAVDFRTHQFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNN-YLHLCN 145
Query: 156 PITRQ--FGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLG 213
P TRQ + + L V+G Y H +YR+L YR G T Y+ T+G
Sbjct: 146 PTTRQWLWVSPPALQHDKVVGLYAHGHPSEYRVLYYREF---------GLGRTFYITTVG 196
Query: 214 SSDVPRCIGWPETSAS---------------GATVVLHCSLHWYQRS--QDMILVFDTTA 256
S R WP +S+ + H +LHW +S Q+ I+VFDT
Sbjct: 197 SRKERRI--WPHSSSESLRKWLTKGTEDTEFNKPFLFHGNLHWLPQSGRQNKIVVFDTLD 254
Query: 257 ESFRWMRAPSDRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQV 316
E+FRW+ P + +L +++G L M S+ G + VD+W+LQDYK +W KY++
Sbjct: 255 EAFRWLHVPFKMHNVS----SLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRI 310
Query: 317 ELPVPEIRGMLGGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFT 376
ELPV EIR ++ W ++SQEGD VLV W F+ D +GNLL FQ G L
Sbjct: 311 ELPVIEIRRLVEDDV-WFLHIVSQEGD--VLVDGSYWQFHYDMKGNLLEKFQCSGRMLNI 367
Query: 377 IGLKLKPSLVQHAFFPLLDSYAVNASPFI 405
L+ SLV H F +LD+ + +A F
Sbjct: 368 TPHILQESLVPHEVFQILDNESRHAPHFF 396
>Os11g0131300
Length = 389
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 170/354 (48%), Gaps = 32/354 (9%)
Query: 57 PPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLV-------DRYKCNEEFLLGIVS 109
PPK +L+CR VC+ WR +TS FLL HH QP L+ R+ + + +
Sbjct: 31 PPKSILQCRAVCKVWRDVTSDRAFLLPHHCRQPPQRLLTFIRDVGSRHDDLDILDYCVEA 90
Query: 110 LDRRAAAARLQPVAQL---DDTCYM----MSADASCDGXXXXSIGGIWWFICNPITRQFG 162
+D R + Q +A+ D C + + ASCDG S + +CNP TRQ+
Sbjct: 91 VDFRTH--QFQSLARFTGQDYDCSLEDSPFTVHASCDGLLLMSYNN-YLHLCNPTTRQWL 147
Query: 163 ALH--LLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIP----GDRNTCYVYTLGSSD 216
+ L V+G Y H + +YR+L YR L E I G + + ++ +S
Sbjct: 148 WVFPPALQHDTVLGLYSHGHSSEYRVLYYREIGLGPEFYISIVGSGKERSIWPHSSSASL 207
Query: 217 VPRCIGWPETSASGATVVLHCSLHWYQR--SQDMILVFDTTAESFRWMRAPSDRMKCTLD 274
E + + H +LHW Q+ I+VFDT E FRW+ P +
Sbjct: 208 RKWLAKGKEETQFNEPFLFHGNLHWLPHLGGQNKIVVFDTLDEVFRWLHVPFKMHNMS-- 265
Query: 275 SGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRGMLGGAYHWS 334
+L +++G L M S+ G + VD+W+LQDYK +W KY++ELPV EIR W
Sbjct: 266 --SLLEIEGSLAMSNSHIGSSKVDLWLLQDYKHMVWVHKYRIELPVIEIRRFEEDD-GWY 322
Query: 335 AMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGDGLFTIGLKLKPSLVQH 388
++SQEGD VLV W F+ D +GNLL FQ G L L+ SLV H
Sbjct: 323 LHIVSQEGD--VLVDGFDWQFHYDIKGNLLEKFQCSGRMLNITPHILQESLVPH 374
>Os02g0543200 Cyclin-like F-box domain containing protein
Length = 493
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 169/391 (43%), Gaps = 54/391 (13%)
Query: 51 EILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPL------VDRYKCNEEFL 104
++L+R+P + RC VCR R L +T F H RH+ P+ +D + +
Sbjct: 113 QVLLRMPAAEVARCSGVCRRLRDLIATDSFRRGHQRHRSRHPMPLFFYRLDHWAFPDRVR 172
Query: 105 LGIVSLDRRAAAARLQPVAQLDDT-CYMMSAD-------ASCDGXXXXSIGGIWWFICNP 156
+ + ++D AA PV + SAD SCDG S + CNP
Sbjct: 173 VHLRAVD--VAARETHPVICFSHADADLRSADPRVFTIEGSCDGILLLSYH-TRLYACNP 229
Query: 157 ITRQFGALHLLCG-FMVMGFYKHPPTGD--YRLLLYRNQELMSEHLIPGDRNTCYVYTLG 213
TR++ L L +++GFY H + YR+L + + PG R + +
Sbjct: 230 STRRWRRLPPLHDDHVIVGFYGHGAIDEREYRVLYHTAR--------PGCRYWVFSLSFF 281
Query: 214 SSDVPRCIGWP--------------ETSASGATVVLHCSLHWYQRSQDM-ILVFDTTAES 258
PR IG P S V + LHW ++ + +LVFDT AES
Sbjct: 282 PDQPPRDIGRPADLEAVRAVLAEGISPSYEMPPVAIAHRLHWRAQAASLNVLVFDTVAES 341
Query: 259 FRWMRAPSDR---MKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQ 315
F W+ P+ + ++ L +++G+L M + T VD+WVLQ + E W YQ
Sbjct: 342 FGWIPPPNQQEGNQMIPVEGDQLLEINGRLAMTLVSQ--TTVDVWVLQ--EGEAWEHHYQ 397
Query: 316 VELPVPEIRGMLGG---AYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQHYGD 372
+ LPV ++ + GG SA V + + VL C + DTEGN+L + G
Sbjct: 398 ISLPV-DLLNVFGGYDDEGFVSAAVFAVSQERNVLAQCPAMMLQCDTEGNVLMFYSLAGH 456
Query: 373 GLFTIGLKLKPSLVQHAFFPLLDSYAVNASP 403
L+ SL+ HAF P+ A++ P
Sbjct: 457 LTVLSRYMLQESLLAHAFLPMRQEDAIDGDP 487
>Os02g0131900
Length = 351
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 143/343 (41%), Gaps = 53/343 (15%)
Query: 48 VVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVDRYKCNEEFLLGI 107
VV EIL+RLP K +LRCR VCR+WRR+T+ F+ H R +P L L+ N+E L
Sbjct: 5 VVAEILLRLPAKSVLRCRAVCRSWRRITTADYFVAAHSRRRP-LQLLGYTGPNDESLRDD 63
Query: 108 VSLDRRAAAARLQPVAQLDDTCYMMSADASCDGXXXXSIGGIWWFICNPITRQFGALHLL 167
L +A + V + D + D S+ ICNP TRQ L +
Sbjct: 64 EFL---VTSAPVTAVPAVYDGTTRSAGDFCGATCACASVNAETMLICNPATRQLVNLPPV 120
Query: 168 CGFMVM-----------GFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSD 216
V+ FY H P+G+YR+L YR + T Y+ + GS +
Sbjct: 121 STGGVVVDRNDLRLHSSAFYFHRPSGEYRVLCYR-------------KGTNYILSTGSGE 167
Query: 217 VPRCIGWPET-----SASGATV--VLHCSLHWYQRSQD---MILVFDTTAESFRWMRAPS 266
R P+ S S TV + S++W +R D I+ FDT +ES
Sbjct: 168 ARRLGPVPDQQRRTCSFSAVTVGKTVGESVYWDRREVDDRSRIMAFDTVSESM------P 221
Query: 267 DRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQVELPVPEIRGM 326
+ +C MDG L + + +D+W E W + +VELP
Sbjct: 222 TKARC------WTCMDGTLAV-AAMPAEPYLDVWARDGGGGERWVRRLRVELPAGYYSKE 274
Query: 327 LGGAYHWSAMVLSQEGDVLVLVSCDRWLFYIDTEGNLLASFQH 369
L +L G +LV +SC RW DT+ + S H
Sbjct: 275 L-KPRGLGRAILDDAGLLLVTLSC-RWGLVYDTKEKRMLSCSH 315
>Os02g0132700
Length = 394
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 138/305 (45%), Gaps = 54/305 (17%)
Query: 48 VVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTHHRHQPTLPLVDRYKCNEEFLLGI 107
VV EIL+RLP K +LR R VCR WRR+T+ F+ + R +P L L+ ++ F +
Sbjct: 5 VVSEILLRLPAKAVLRSRAVCRTWRRITTAHYFITAYSRRRP-LQLLGHTDPSDHF-TSV 62
Query: 108 VSLDRRAAAARLQPVAQLDDTC-------------YMMSADASCDGX---XXXSIGGIWW 151
+L A A V ++DD + +S +CDG GG+
Sbjct: 63 YTLTSLPATA----VPRIDDGGDIAGCRRLLQRGRFCLSLVTTCDGLLMFRRVQKGGM-- 116
Query: 152 FICNPITRQF--------GALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGD 203
ICNP TRQ + +GFY H P+G+YR+L +R P
Sbjct: 117 LICNPATRQLVNPVSPEPSSRPKDNELRTLGFYFHRPSGEYRVLCHR----------PLL 166
Query: 204 RNTCYVYTLGSSDVPRCIGWPE----TSASGATV---VLHCSLHWYQRSQDMILVFDTTA 256
NT Y+ + G+++ + G P+ T G T+ V C + Q + I FDT +
Sbjct: 167 DNTTYILSTGAAEPRQLGGGPDYHRCTMFVGETIGDTVYWCRPRYLQNGKPQISSFDTVS 226
Query: 257 ESFRWMRAPSDRMKCTLDSGNLFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQV 316
E+FR + P + + ++ DM G ++ + +D+W L + +R W + +V
Sbjct: 227 EAFRLLPPPPVSL-AEDELVDMIDMHGTPAVWTMTE--LHLDVWALDEDER--WVRRLRV 281
Query: 317 ELPVP 321
E+P P
Sbjct: 282 EMPPP 286
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,224,674
Number of extensions: 614974
Number of successful extensions: 1703
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1652
Number of HSP's successfully gapped: 12
Length of query: 405
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 302
Effective length of database: 11,657,759
Effective search space: 3520643218
Effective search space used: 3520643218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)