BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0137100 Os04g0137100|Os04g0137100
(492 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0137100 Similar to Pectate lyase (Fragment) 782 0.0
Os10g0457200 Virulence factor, pectin lyase fold family pro... 508 e-144
Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2) 411 e-115
Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 404 e-112
Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) ... 400 e-111
Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2) 399 e-111
Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2) 392 e-109
Os05g0293500 Similar to Pectate lyase B (Fragment) 367 e-101
Os08g0286100 282 4e-76
Os01g0546800 Virulence factor, pectin lyase fold family pro... 158 8e-39
Os01g0837100 150 2e-36
AK060609 135 5e-32
>Os04g0137100 Similar to Pectate lyase (Fragment)
Length = 492
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/406 (94%), Positives = 385/406 (94%)
Query: 87 MTVPGAVDDPEEVVSQVHMSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLAD 146
MTVPGAVDDPEEVVSQVHMSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLAD
Sbjct: 87 MTVPGAVDDPEEVVSQVHMSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLAD 146
Query: 147 CGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQ 206
CGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQ
Sbjct: 147 CGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQ 206
Query: 207 ELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGW 266
ELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGW
Sbjct: 207 ELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGW 266
Query: 267 RTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHS 326
RTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHS
Sbjct: 267 RTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHS 326
Query: 327 DSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQ 386
DSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQ
Sbjct: 327 DSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQ 386
Query: 387 GNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTPXXXXXXXXXXXXXX 446
GNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTP
Sbjct: 387 GNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTPSGAGASASYSRASS 446
Query: 447 XXXXXXXMLLTMVIYDPLQEDSPFPQPPPAPNCEHCQWQQARSVAD 492
MLLTMVIYDPLQEDSPFPQPPPAPNCEHCQWQQARSVAD
Sbjct: 447 LGAKSSSMLLTMVIYDPLQEDSPFPQPPPAPNCEHCQWQQARSVAD 492
>Os10g0457200 Virulence factor, pectin lyase fold family protein
Length = 446
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/352 (67%), Positives = 284/352 (80%), Gaps = 13/352 (3%)
Query: 92 AVDDPEEVVSQVHMSIRNSTARRKL---------GYLSCGTGNPIDDCWRC-DPDWHKNR 141
++ DP VV+ H + +T+RR++ G C TGNPID CWRC DW ++R
Sbjct: 33 SLPDPAAVVADFHSKV--ATSRRRMQKADGGGGGGGGGCLTGNPIDHCWRCAGTDWRQDR 90
Query: 142 QRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMV 201
QRLADCGIGFGRNA+GG+ G +YVVTDPSD D VNP GTLRY I++ PLWIVF DM
Sbjct: 91 QRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWIVFAGDMT 150
Query: 202 ITLKQELIMNSFKTIDGRGANVHI-ANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSS 260
I L +EL++NS+KTIDGRGANVH+ A GACIT+QYV+NVIIH +H+HDC P GNA VR+S
Sbjct: 151 IRLNEELLVNSYKTIDGRGANVHVGAGGACITLQYVSNVIIHNIHVHDCVPAGNANVRAS 210
Query: 261 PSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEV 320
P+HYGWRT +DGD +S++ A +WVDHC+LS CADGLIDAIMGSTAITVSN+YF+HHNEV
Sbjct: 211 PTHYGWRTRSDGDGISLYSARDVWVDHCALSRCADGLIDAIMGSTAITVSNSYFSHHNEV 270
Query: 321 MLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAE 380
MLLGHSD Y+ D AMQVTIAFNHFG L+QRMPRCR GYFH+VNNDYT WEMYAIGGSA
Sbjct: 271 MLLGHSDGYLPDSAMQVTIAFNHFGIQLVQRMPRCRRGYFHIVNNDYTAWEMYAIGGSAS 330
Query: 381 PTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTP 432
PTINSQGNRY+AP +P AKEVTKRV+T + W GWNWR+EGD+++NGAFF P
Sbjct: 331 PTINSQGNRYIAPADPNAKEVTKRVDTEEGQWAGWNWRTEGDMMVNGAFFVP 382
>Os06g0144200 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 450
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/340 (58%), Positives = 249/340 (73%), Gaps = 6/340 (1%)
Query: 93 VDDPEEVVSQVHMSIRNSTARRKLGYLS--CGTGNPIDDCWRCDPDWHKNRQRLADCGIG 150
V DP +++ + + +T RR L + C NPID CWRC DW +R+RLA C G
Sbjct: 72 VSDPVATLNRFNADVLRATTRRSLARYTGPCMATNPIDRCWRCRDDWATDRKRLARCVRG 131
Query: 151 FGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIM 210
FG +GG GKIYVVTD SDD+ V P+KGTLRY VI+D P+WIVF RDM+I L+QELI+
Sbjct: 132 FGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMIIQLRQELIV 191
Query: 211 NSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMA 270
N KTIDGRGA VHI GA IT+Q V +VIIH +HIH P G M+R S HYG RT +
Sbjct: 192 NHNKTIDGRGAQVHIT-GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLRTRS 250
Query: 271 DGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYV 330
DGD +SI +S+IW+DH S+SNC+DGLIDA+ GSTAIT+SN +FT H+ VML G S+S
Sbjct: 251 DGDGISIMSSSNIWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVMLFGASNSDA 310
Query: 331 KDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRY 390
+D+ MQ+T+AFNHFG+GL+ PRCR G+FHVVNNDYTHW MYAIGG+ PTI SQGNR+
Sbjct: 311 QDEVMQITVAFNHFGKGLV---PRCRFGFFHVVNNDYTHWLMYAIGGNMNPTIISQGNRF 367
Query: 391 LAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFF 430
+AP + AKEVTKR T +K W W+S+GD+++NGAFF
Sbjct: 368 IAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMMNGAFF 407
>Os02g0214400 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 446
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 245/347 (70%), Gaps = 12/347 (3%)
Query: 95 DPEEVVSQVHMSIRNSTAR----RKLGYLS------CGTGNPIDDCWRCDPDWHKNRQRL 144
DP V ++ + ++ ST R R+L + C NPID CWRC DW +R+RL
Sbjct: 58 DPFNVTNEFNHAVIRSTERGVLRRELSGKNSKYKGPCLATNPIDRCWRCRKDWATDRKRL 117
Query: 145 ADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITL 204
A C +GFGR A GG GKIYVVTDP D DA NP+ GTLR+ ++ PLWI F + MVI L
Sbjct: 118 ARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYGTLRWGAMQAAPLWITFAKSMVIRL 177
Query: 205 KQELIMNSFKTIDGRGANVHIA-NGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSH 263
QEL++ S KTIDGRGA VHIA GA IT+Q+ NVII LH+HD + + VR SP+H
Sbjct: 178 TQELLVASDKTIDGRGAQVHIARGGAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTH 237
Query: 264 YGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLL 323
G RT ADGD +S+F A+ +WVDH S+S C DGLID + GST +T+SN++FT+HN+VML
Sbjct: 238 IGPRTRADGDGISLFAATDVWVDHVSMSMCEDGLIDVVQGSTGVTISNSHFTNHNDVMLF 297
Query: 324 GHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTI 383
G SDSY +DK MQ+T+AFNHFG GL+QRMPRCR G+FHVVNNDYTHW MYAIGG PTI
Sbjct: 298 GASDSYPQDKVMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGGMSPTI 357
Query: 384 NSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFF 430
SQGNRY+AP N AK +T R + WK W WRS+GDL +NGA+F
Sbjct: 358 LSQGNRYIAPPNIAAKLIT-RHYAPEWEWKNWAWRSDGDLFMNGAYF 403
>Os06g0583900 Similar to Pectate lyase homolog (EC 4.2.2.2) (Fragment)
Length = 448
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 249/347 (71%), Gaps = 10/347 (2%)
Query: 95 DPEEVVSQVHMSIRNS---TARRKLGYLS-------CGTGNPIDDCWRCDPDWHKNRQRL 144
DP EV + + ++ S + RR+L C NPID CWRC DW +R+RL
Sbjct: 60 DPFEVTNSFNRAVHRSEEESGRRELAMTKRKKFAGPCKATNPIDRCWRCRADWVTDRKRL 119
Query: 145 ADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITL 204
A C GFGRN GG GK Y+VTD +DDD NP+ GTLR+ VI+DEPLWI+F +DM+I L
Sbjct: 120 ARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPGTLRWGVIQDEPLWIIFAKDMIINL 179
Query: 205 KQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHY 264
K+E+++NS KTIDGRGA V I NGA +T+Q NVIIH +HIHD M+R SP H+
Sbjct: 180 KEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVIIHNIHIHDILQGKGGMIRDSPEHF 239
Query: 265 GWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLG 324
G+RT +DGD +SIFG++++W+DH SLSNC DGLID I ST +T+SN + T+HN+VML G
Sbjct: 240 GFRTQSDGDGISIFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHLTNHNDVMLFG 299
Query: 325 HSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTIN 384
SDS+ +D+ MQ+T+AFNHFG GL+QRMPRCR G+FHVVNNDYTHW MYAIGGS PTI
Sbjct: 300 SSDSFSEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTII 359
Query: 385 SQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFT 431
SQGNRY+AP N AK +TK++ + WK W W SE DL + GA+FT
Sbjct: 360 SQGNRYIAPPNLAAKRITKQLGATEEEWKNWVWHSEEDLFMEGAYFT 406
>Os06g0145100 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 348
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/306 (62%), Positives = 234/306 (76%), Gaps = 4/306 (1%)
Query: 125 NPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRY 184
NPID CWRC DW +R+RLA C GFG +GG GKIYVVTD SDD+ V P+KGTLRY
Sbjct: 4 NPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGTLRY 63
Query: 185 AVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGL 244
VI+D P+WIVF RDM+I L+QELI+N KTIDGRGA VHI GA IT+Q V +VIIH +
Sbjct: 64 GVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHIT-GAQITLQGVQHVIIHNV 122
Query: 245 HIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGS 304
HIH P G M+R S HYG RT +DGD +SI +S+IW+DH S+SNC+DGLIDA+ GS
Sbjct: 123 HIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVSGS 182
Query: 305 TAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVN 364
TAIT+SN +FT H+ VML G S+S +D+ MQ+T+AFNHFG+GL+ PRCR G+FHVVN
Sbjct: 183 TAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLV---PRCRFGFFHVVN 239
Query: 365 NDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLL 424
NDYTHW MYAIGG+ PTI SQGNR++AP + AKEVTKR T +K W W+S+GD++
Sbjct: 240 NDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVM 299
Query: 425 LNGAFF 430
+NGAFF
Sbjct: 300 MNGAFF 305
>Os06g0144900 Similar to Pectate lyase homolog (EC 4.2.2.2)
Length = 448
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 229/310 (73%), Gaps = 1/310 (0%)
Query: 121 CGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKG 180
C NPID CWRC +W R+RLA C +GFG A GG GKIY+VTD D+ V P++G
Sbjct: 97 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 156
Query: 181 TLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVI 240
TLR+AVI++ PLWIVF R MVI L +ELI+ S KTIDGRGA VH+ GA IT+Q V+NVI
Sbjct: 157 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHVT-GAQITVQAVSNVI 215
Query: 241 IHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDA 300
IH LHIH+ P ++R S H+G R +DGD +S+ G+S+IW+DH S+SNC+DGLID
Sbjct: 216 IHNLHIHNSVPRSGGLIRDSMHHFGIRGESDGDGISVMGSSNIWIDHVSMSNCSDGLIDI 275
Query: 301 IMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYF 360
GSTAIT+SN++FT H+ VML G D KDK MQVT+AFNHFG+GL+QRMPRCR G+F
Sbjct: 276 TDGSTAITISNSHFTKHDHVMLFGARDDSPKDKIMQVTLAFNHFGKGLVQRMPRCRFGFF 335
Query: 361 HVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSE 420
H+VNNDYTHW MYAIGG+ PTI SQGNR+ A + KEVTKR T+ +K W W+S+
Sbjct: 336 HMVNNDYTHWLMYAIGGNMNPTIISQGNRFRASDDMKLKEVTKREYTSYDEYKEWVWKSQ 395
Query: 421 GDLLLNGAFF 430
DL LNGAFF
Sbjct: 396 DDLFLNGAFF 405
>Os05g0293500 Similar to Pectate lyase B (Fragment)
Length = 373
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 223/312 (71%), Gaps = 18/312 (5%)
Query: 121 CGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKG 180
CGTGNPIDDCWRCDP W NRQRLADC +GFGR A+GG+ G++YVV D + DDA P G
Sbjct: 37 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVND-TGDDAARPAPG 95
Query: 181 TLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANG-ACITIQYVTNV 239
TLRY +++DEPLWIVF DM I+ EL+++S KT+DGRGA V + +G AC ++ ++V
Sbjct: 96 TLRYGLVQDEPLWIVFAGDMTISPAHELVVSSRKTVDGRGARVVVGDGGACFAVRGASDV 155
Query: 240 IIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLID 299
+IHGL I CRP M+DGD V +S +WVDHC++ CADGLID
Sbjct: 156 VIHGLTIRRCRPAPKLEA----------GMSDGDGV--HNSSDVWVDHCTVEACADGLID 203
Query: 300 AIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGY 359
++GST +T+SNN +H++ +LLGH+D Y DKAMQVT+AFN FG GL+QRMPRCR G
Sbjct: 204 VVVGSTRVTLSNNLLRNHDKAILLGHNDDYTDDKAMQVTVAFNRFGPGLVQRMPRCRFGL 263
Query: 360 FHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKR-VETAQTIWKGWNWR 418
FHV+NNDY W+ YAIGGSA PTI S GNR+ A AKEVTKR + +++W WNW
Sbjct: 264 FHVINNDYIAWQKYAIGGSASPTIISHGNRFYA---DMAKEVTKRDDDVPESVWHHWNWV 320
Query: 419 SEGDLLLNGAFF 430
S+GDL+LNGAFF
Sbjct: 321 SDGDLMLNGAFF 332
>Os08g0286100
Length = 384
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/320 (48%), Positives = 196/320 (61%), Gaps = 20/320 (6%)
Query: 125 NPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKI--YVVTDPSDDDAVNPKKGTL 182
N ID CWR +W +RQRLA C +GF R + Y VTDPSDD V P+ GTL
Sbjct: 28 NVIDRCWRGQRNWAADRQRLAVCSVGFAGKMRQNRGAGVVAYTVTDPSDD-PVRPRPGTL 86
Query: 183 RY-AVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVII 241
RY A + +WI F RDM I L Q L + +F TIDGRGA+VH+A GA I + + +VI+
Sbjct: 87 RYGATVLPAKVWITFARDMRIRLAQPLYVKNFTTIDGRGADVHVAGGAGIVLYHARDVIV 146
Query: 242 HGLHIHDCR--PTGNAMVRSS---PSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADG 296
HGLH+HDCR P G +V PS G DGDA+ + +S +W+DH +LS C DG
Sbjct: 147 HGLHVHDCRAQPPGRVVVPGGAVQPSGSG-----DGDAIRLVASSKVWIDHNTLSRCEDG 201
Query: 297 LIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCR 356
L+D +GST +TVSNN+F H++VMLLGH D + D+ M+VT+AFN FG + QRMPR R
Sbjct: 202 LLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRMRVTVAFNRFGPNVNQRMPRIR 261
Query: 357 HGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPF-AKEVTKRVETAQTIWKG- 414
HGY HVVNN Y W YAIGGS P++ SQGN + A K+VT+R+ G
Sbjct: 262 HGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGGAGDNKKVTRRMPAVARGGGGG 321
Query: 415 ----WNWRSEGDLLLNGAFF 430
W+ S GD NGAFF
Sbjct: 322 GKDQWHLHSVGDAFENGAFF 341
>Os01g0546800 Virulence factor, pectin lyase fold family protein
Length = 364
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 145/295 (49%), Gaps = 27/295 (9%)
Query: 136 DWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIV 195
D + + LA GFGR AIGG G +Y VT DD GTLR A PLWIV
Sbjct: 45 DADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDD-----GHGTLRQACRAHGPLWIV 99
Query: 196 FKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNA 255
F I L+ L + S KTIDGRG V + G + ++ +VI+ L I R
Sbjct: 100 FDVSGDIHLRTYLRVTSHKTIDGRGQRVRLL-GKGLQLKECRHVIVCNLQIEGGRGHDVD 158
Query: 256 MVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFT 315
++ PS ++ IW+D CSL++C DGL+D GST +TVS F+
Sbjct: 159 AIQIKPS-----------------SADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFS 201
Query: 316 HHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAI 375
H++ ML+G S+ D+ ++VT+ F +G QR PR R G H+ NN W +YA+
Sbjct: 202 RHDKTMLVGADPSHTGDRGIRVTVHHCFF-DGTRQRHPRVRFGRAHLYNNYTRGWGIYAV 260
Query: 376 GGSAEPTINSQGNRYLAPTNPFA--KEVTKRVETAQTIWKGWNWRSEGDLLLNGA 428
E + SQ N Y A A + V +R + GW RSEGD LNGA
Sbjct: 261 AAGVEAQVASQCNVYEAGAERKAVFRYVPERAADREEAEAGW-VRSEGDAFLNGA 314
>Os01g0837100
Length = 343
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 137/267 (51%), Gaps = 23/267 (8%)
Query: 164 YVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANV 223
Y D S + G+LR R EPLWIVF I L L ++S+KTIDGRG V
Sbjct: 26 YATADSSLRVMADDGDGSLREGCRRREPLWIVFDVSGTIHLSTGLRVSSYKTIDGRGQRV 85
Query: 224 HIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIF-GASH 282
+ +G + ++ +VI+ L + CR H D DAV++ G+ H
Sbjct: 86 TL-SGKGLQLRECEHVIVCNLEVEGCR-----------GH-------DADAVAVKPGSRH 126
Query: 283 IWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFN 342
+W+D C L C DGL+D GST +TVS F+ H++ +L+G S +V+D+A++VTI
Sbjct: 127 VWIDRCGLRGCGDGLLDVTRGSTDVTVSRCRFSAHDKAVLIGGSAGHVEDRAIRVTIHHC 186
Query: 343 HFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLA-PTNPFAKEV 401
F +G QR PR R G H+ NN W +YA+ S E I SQ N Y A K +
Sbjct: 187 LF-DGTRQRHPRVRFGRVHLYNNYTRGWGIYAVCASVESQIVSQCNIYEAGEKKKVFKYM 245
Query: 402 TKRVETAQTIWKGWNWRSEGDLLLNGA 428
++ G+ RSEGDL LNGA
Sbjct: 246 IEQAADRDQSSTGF-IRSEGDLFLNGA 271
>AK060609
Length = 103
Score = 135 bits (341), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/62 (98%), Positives = 62/62 (100%)
Query: 371 EMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFF 430
EMYAIGGSAEPTINS+GNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFF
Sbjct: 1 EMYAIGGSAEPTINSRGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFF 60
Query: 431 TP 432
TP
Sbjct: 61 TP 62
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,476,893
Number of extensions: 667987
Number of successful extensions: 2203
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2177
Number of HSP's successfully gapped: 12
Length of query: 492
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 387
Effective length of database: 11,553,331
Effective search space: 4471139097
Effective search space used: 4471139097
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)