BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0101800 Os04g0101800|J033073J02
(603 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0101800 Zinc finger, RING-type domain containing protein 1014 0.0
Os03g0142500 Zinc finger, RING-type domain containing protein 185 7e-47
Os02g0619600 Zinc finger, RING-type domain containing protein 172 9e-43
Os04g0508800 Similar to Retroelement pol polyprotein-like 164 2e-40
Os02g0806700 Similar to Retroelement pol polyprotein-like 163 4e-40
Os10g0464500 Zinc finger, RING-type domain containing protein 141 1e-33
Os10g0464900 Zinc finger, RING-type domain containing protein 138 1e-32
Os10g0464800 137 3e-32
Os08g0126100 132 1e-30
Os08g0126000 101 1e-21
Os09g0298500 Zinc finger, RING-type domain containing protein 93 7e-19
Os12g0203600 83 7e-16
Os12g0431700 von Willebrand factor, type A domain containin... 72 2e-12
Os01g0640200 von Willebrand factor, type A domain containin... 69 1e-11
Os06g0153400 69 1e-11
>Os04g0101800 Zinc finger, RING-type domain containing protein
Length = 603
Score = 1014 bits (2621), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/603 (85%), Positives = 516/603 (85%)
Query: 1 GLGIITSLVVLVDFVERKEKKELIAKEINNVGWMQSRCGVCSHGVKTGAAAVFTAECSHS 60
GLGIITSLVVLVDFVERKEKKELIAKEINNVGWMQSRCGVCSHGVKTGAAAVFTAECSHS
Sbjct: 1 GLGIITSLVVLVDFVERKEKKELIAKEINNVGWMQSRCGVCSHGVKTGAAAVFTAECSHS 60
Query: 61 FHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPFINKRXXXXXXHKRKSYDDDEPLLAPKA 120
FHFPCI SCPVCAAPWRQAPFINKR HKRKSYDDDEPLLAPKA
Sbjct: 61 FHFPCIAAHAHALAAATALSCPVCAAPWRQAPFINKRTTTTDDHKRKSYDDDEPLLAPKA 120
Query: 121 AAGAFNPIPEDDEDDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAP 180
AAGAFNPIPEDDEDDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAP
Sbjct: 121 AAGAFNPIPEDDEDDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAP 180
Query: 181 ALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKR 240
ALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKR
Sbjct: 181 ALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKR 240
Query: 241 LLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVA 300
LLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVA
Sbjct: 241 LLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVA 300
Query: 301 TVMLLSDTXXXXXXXXDXXXXXXXXXXXTRFTHVEIPIGPGEEPARSALVAEEDDDQFSE 360
TVMLLSDT D TRFTHVEIPIGPGEEPARSALVAEEDDDQFSE
Sbjct: 301 TVMLLSDTQQQQQQQQDAIRRPPAAPPATRFTHVEIPIGPGEEPARSALVAEEDDDQFSE 360
Query: 361 HAFAKCLGGLVSVVMQEVQLELAFPTGEITAVYSCGHXXXXXXXXXXXXXXXXXXXXXXX 420
HAFAKCLGGLVSVVMQEVQLELAFPTGEITAVYSCGH
Sbjct: 361 HAFAKCLGGLVSVVMQEVQLELAFPTGEITAVYSCGHGQQAVALGGGGGGAAVSVSLGEM 420
Query: 421 XXXXXXXXXXXXRAPLSQSHPHSLSVRCSYREPASQETVRGAEQQLVVPALHGGSSSRRL 480
RAPLSQSHPHSLSVRCSYREPASQETVRGAEQQLVVPALHGGSSSRRL
Sbjct: 421 YAEEERELLVELRAPLSQSHPHSLSVRCSYREPASQETVRGAEQQLVVPALHGGSSSRRL 480
Query: 481 HDLFVATRAVAESRRLAELNDYATAIHLLSSARAVVVQSAEQGLVGSLDTELSDMXXXXX 540
HDLFVATRAVAESRRLAELNDYATAIHLLSSARAVVVQSAEQGLVGSLDTELSDM
Sbjct: 481 HDLFVATRAVAESRRLAELNDYATAIHLLSSARAVVVQSAEQGLVGSLDTELSDMRWRRG 540
Query: 541 XXXXXXXXXESEETPVGTPRARGGEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFEN 600
ESEETPVGTPRARGGEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFEN
Sbjct: 541 QSAGRRRGGESEETPVGTPRARGGEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFEN 600
Query: 601 ARF 603
ARF
Sbjct: 601 ARF 603
>Os03g0142500 Zinc finger, RING-type domain containing protein
Length = 694
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 191/387 (49%), Gaps = 53/387 (13%)
Query: 33 WMQSR-CGVCSHGVKTGAAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQA 91
W + + C +C G++TG A+FTAECSH FHF CI CPVC A W++
Sbjct: 69 WGKKKVCAICLGGIRTGGQALFTAECSHEFHFHCISSNVNHGNYV----CPVCRAEWKEL 124
Query: 92 PFINKRXXXXXXHKRK----SYDDDEPLLA-----PKAAAGAFN-----------PIPED 131
PF + + + ++ DE ++ +G I D
Sbjct: 125 PFQGTQPGDTAYGRARVSTVNWPQDEGQMSVVRRLSHGYSGNLQQQLAVFRTPEASIFND 184
Query: 132 DE--DDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAPALRSSPSTR 189
DE D +E A S T + A+ + RR + + + +KAP S S+R
Sbjct: 185 DENIDPQSETVDDHNAVTNSVEIKTYSEFPAIQKSERRK-VFAILIHLKAPKSLDSVSSR 243
Query: 190 APIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKRLLPLRRMTR 249
AP+DLVTVLDVS M G KL +LKR M VI +LGP DRL++VAFS A+RL PLRRMT
Sbjct: 244 APLDLVTVLDVSGSMSGIKLSLLKRAMSFVIQTLGPNDRLSVVAFSSTAQRLFPLRRMTL 303
Query: 250 QGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVATVMLLS--- 306
G++ A Q + LV + DAL+K KV++DRR +NPV++++LLS
Sbjct: 304 TGRQQALQAISSLVASGGTN---------IADALKKGAKVVKDRRRKNPVSSIILLSDGQ 354
Query: 307 DTXXXXXXXXDXXXXXXXXXXXTRFT--HVEI-PIGPGEEPARSAL--VAEEDDDQFS-- 359
DT D T HV+I G G + +A+ +AE + FS
Sbjct: 355 DTHSFLSGEADINYSILVPPSILPGTSHHVQIHTFGFGTDHDSAAMHAIAETSNGTFSFI 414
Query: 360 ------EHAFAKCLGGLVSVVMQEVQL 380
+ AFA+C+GGL+SVV+++++L
Sbjct: 415 DAEGSIQDAFAQCMGGLLSVVVKDMRL 441
>Os02g0619600 Zinc finger, RING-type domain containing protein
Length = 709
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/411 (31%), Positives = 188/411 (45%), Gaps = 68/411 (16%)
Query: 38 CGVCSHGVKTG-AAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPFINK 96
C +C +K+G A+FTAECSH FHF CI CPVC A W++ PF N+
Sbjct: 82 CAICFDPMKSGHGQALFTAECSHMFHFHCISSSVKHGNYV----CPVCRAKWKEIPF-NR 136
Query: 97 RXXXXXXHKRKSYDDDEPLLAPKA---------------AAGAFNPIPEDDEDDA----T 137
R + ++ L + A+G+ P D DD
Sbjct: 137 SLSSIVPRGRSGLNVNQARLPQQGTYMALLRQVPSHHREASGSHTSEPVDFNDDEPLQLI 196
Query: 138 EFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAPALR-------------- 183
E AR + + P+ + + + V + +KAP
Sbjct: 197 ESGDSRDARCSRAVEIKTYPEFSAIPQSSSEDDFAVLIHLKAPCANPEQVTGRPFNATSI 256
Query: 184 SSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKRLLP 243
P++RAP+DLVTVLDVS M G KL +LKR M VI LGP+DRL+++AFS A+RL
Sbjct: 257 GYPTSRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIQHLGPSDRLSVIAFSSTARRLFH 316
Query: 244 LRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVATVM 303
LRRM+ G++ A Q V+ L A G + DAL+KA KV+EDR +NPV +++
Sbjct: 317 LRRMSHSGRQQALQAVNLL---GAGGGTN------IADALKKAAKVIEDRNYKNPVCSII 367
Query: 304 LLSDTXXXXXXXXDXXXX-----XXXXXXXTRFTHVEIPI---GPGEEPARSAL--VAEE 353
LLSD + T +P+ G G + AL +AE
Sbjct: 368 LLSDGQDTYNISSNVRGTRPDYRSLVPSSILNHTICTVPVHGFGFGADHDSDALHSIAES 427
Query: 354 DDDQFS--------EHAFAKCLGGLVSVVMQEVQL--ELAFPTGEITAVYS 394
FS + AFA+C+GGL+SVV+Q+++L E P+ ++ + S
Sbjct: 428 SGGTFSFIEDESVIQDAFAQCIGGLLSVVVQDMRLTVECVHPSVQLHTIKS 478
>Os04g0508800 Similar to Retroelement pol polyprotein-like
Length = 708
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 234/561 (41%), Gaps = 82/561 (14%)
Query: 38 CGVCSHGVKTG-AAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPFINK 96
C +C ++ G A+FTAECSH FHF CI CP+C A W++ PF N+
Sbjct: 93 CAICFDSMRHGNGQALFTAECSHMFHFHCISSNVKHGNYF----CPICRAKWKEIPF-NR 147
Query: 97 RXXXXXXHKR--------KSYDDDEPLL--APKAAAGAFNPI---PEDDEDD----ATEF 139
H R D + LL P P P D DD E
Sbjct: 148 SLSSNIPHGRIGVSRARLTQQDANMALLHQVPNHHQRVRRPHTSEPADFNDDEPLQQPEV 207
Query: 140 RGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAPALR--------------SS 185
R + P+ + + + + + +KAP+ S
Sbjct: 208 FDNLNVRSTKTAEINTYPEFSTIPQSSSKDDFAILIHLKAPSANPDQGTGKLANESSAGS 267
Query: 186 PSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKRLLPLR 245
RAP+DLVTVLDVS M G KL +LKR M V+ LGP+DRL+++AFS +A+RL L+
Sbjct: 268 SRNRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVVQHLGPSDRLSVIAFSSSARRLFHLQ 327
Query: 246 RMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVATVMLL 305
R++ G++ A Q ++ L A+ G + DAL+KA KV+EDR +N V +++LL
Sbjct: 328 RISHHGRQQALQAINSL---GASGGTN------IADALKKAMKVIEDRSYKNSVCSIILL 378
Query: 306 SDTXXXXXXXXDXXXXXXXXXXXTRFTHVE-----IPI---GPGEEPARSAL--VAEEDD 355
SD + + +P+ G G + +L +A+
Sbjct: 379 SDGQDTYNISSSVQGASPDYKSLVPSSIINDARHTVPLHAFGFGADHDSDSLHSIAQASG 438
Query: 356 DQFS--------EHAFAKCLGGLVSVVMQE--VQLELAFPTGEITAVYSCGHXXXXXXXX 405
FS + AFA+C+GGL+S+V+QE V +E P +++++ S +
Sbjct: 439 GTFSFIEDEGVMQDAFAQCIGGLLSIVIQEMRVSMECVHPGVQLSSIKSGSY-----PSK 493
Query: 406 XXXXXXXXXXXXXXXXXXXXXXXXXXXRAPLSQSHPHSLSVRCSYREPASQETVR--GAE 463
P S+ +L V C+YR+P + ET++ G E
Sbjct: 494 VARDGRNGSVDIGHLYADEERDILLSVNIPQSRHQTSALKVSCAYRDPVTGETIKIQGDE 553
Query: 464 QQLVVPAL-----HGGSSSRRLHDLFVATRAVAESRRLAELNDYATAIHLLSSARAVVVQ 518
++ P H R + A ++ +R AE + A+ +L R + Q
Sbjct: 554 VKINRPTTSNISEHVSIEVDRERNRIQAAESIECARAAAEKGALSEAVAILEDCRRTLSQ 613
Query: 519 S----AEQGLVGSLDTELSDM 535
S + L SLD EL +M
Sbjct: 614 SFASRSGDRLSLSLDAELREM 634
>Os02g0806700 Similar to Retroelement pol polyprotein-like
Length = 723
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 162/586 (27%), Positives = 239/586 (40%), Gaps = 128/586 (21%)
Query: 38 CGVCSHGVKTGAA-AVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPF--- 93
C +C +K G A+FTAECSH+FHF CI +CPVC W++ PF
Sbjct: 95 CAICLTTMKPGQGHALFTAECSHTFHFHCIAANVKHGSN----NCPVCRTKWKELPFRGP 150
Query: 94 -----------IN-------------------KRXXXXXXH--------KRKSYDDDEPL 115
IN R H R ++DDEPL
Sbjct: 151 LPGEFPQGSARINPVNGHQNGGQMTILRPLPRARSSGRLHHMTSLLPDTDRSIFNDDEPL 210
Query: 116 LAPKAAAGAFNPIPEDDEDDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAV 175
D +A E G R+ + + P+ V + V V
Sbjct: 211 ---------------DSLSEANE--GSQQGCLRT-VEIKTYPEFTEVPESTSERNFTVLV 252
Query: 176 RVKAP---ALRSSP---------STRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASL 223
+KAP L++S +TRAP+DL+TVLDVS M G KL +LKR M VI +L
Sbjct: 253 HLKAPLAQTLQTSSKLEDGNSLGTTRAPVDLITVLDVSGSMAGTKLALLKRAMGFVIQNL 312
Query: 224 GPADRLAIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDAL 283
G +DRL+++AFS +A+RL PLRRMT G++ + Q V L + + L
Sbjct: 313 GSSDRLSVIAFSSSARRLFPLRRMTETGRQQSLQAVYSLTSNGGTN---------IAEGL 363
Query: 284 RKATKVLEDRRDRNPVATVMLLSDTXXXXXXXXDXXXXXXXXXXXTRFTHV-----EIPI 338
RK +KV+EDR+ +NPV +++LLSD + + ++P+
Sbjct: 364 RKGSKVIEDRQAKNPVCSIILLSDGQDTYTVSPTAGVHKAAPEYCSLLPYTSNGCQQVPV 423
Query: 339 ---GPGEEPARSAL--VAEEDDDQFS--------EHAFAKCLGGLVSVVMQE--VQLELA 383
G G + +L +++ FS + AFA+C+GGL+SVV Q+ V++E
Sbjct: 424 HVFGFGADHDSVSLHSISQTSGGTFSFIETEAAIQDAFAQCIGGLLSVVAQDLHVKVESL 483
Query: 384 FPTGEITAVYSCGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPLSQSHPHS 443
P ++ S + P
Sbjct: 484 HPDVHFGSIRSGSY-----SSRLADDKRNGSIDVGDMYAEEERDFLMSVNVPPGYGETAL 538
Query: 444 LSVRCSYREPASQETVRGAEQQLVV--PALHGGSS--------SRRLHDLFVATRAVAES 493
L V C Y++P +ET+ A+ Q+ + PA S RLH A +AE+
Sbjct: 539 LKVGCVYKDPLMKETINMADVQVKISRPAFVSVQSVSIEVDRQKNRLH----AAEVMAEA 594
Query: 494 RRLAELNDYATAIHLLSSARAVVV--QSAEQG--LVGSLDTELSDM 535
R AE D A+ LL R +++ S + G L +LD EL +M
Sbjct: 595 RLSAERGDLTHAVSLLEDCRRMIMGSTSGQSGDRLCQALDAELKEM 640
>Os10g0464500 Zinc finger, RING-type domain containing protein
Length = 719
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 180/389 (46%), Gaps = 54/389 (13%)
Query: 170 KYVVAVRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRL 229
++ V + +KAP+ ++ ++RAPIDLVTVLDVS M G KL +LKR M VI +LGP DRL
Sbjct: 238 EFAVLIHLKAPSSPATVTSRAPIDLVTVLDVSWSMAGTKLALLKRAMSFVIQALGPGDRL 297
Query: 230 AIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKV 289
++V FS +A+RL PLR+MT G++ A Q V LV + DALRKA +V
Sbjct: 298 SVVTFSSSARRLFPLRKMTESGRQRALQRVSSLVADGGTN---------IADALRKAARV 348
Query: 290 LEDRRDRNPVATVMLLSDTXXXXXXXXDXXXXXXXXXXXTRFT-------------HVEI 336
+EDRR+RNPV +++LLSD HV++
Sbjct: 349 MEDRRERNPVCSIVLLSDGRDTYTVPVPRGGGGGGDQPDYAVLVPSSLLPGGGSARHVQV 408
Query: 337 -PIGPGEEPARSAL--VAEEDDDQFS--------EHAFAKCLGGLVSVVMQEVQLELAFP 385
G G + A+ +AE FS + AFA+C+GGL+SVV QE L L+
Sbjct: 409 HAFGFGADHDSPAMHSIAEMSGGTFSFIDAAGSIQDAFAQCIGGLLSVVAQE--LRLSVE 466
Query: 386 TGE----ITAVYSCGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPLSQSHP 441
G+ +T+V S G+ R P ++
Sbjct: 467 CGDDGVLLTSVRSGGY-----ASHVDGDGRGGFVDVGDLYADEERDFLVTVRVPAARGVS 521
Query: 442 HSLSVRCSYREPASQETVRGAEQQLVVPAL------HGGSS---SRRLHDLFVATRAVAE 492
++ C+YR A+ ETVR + VP + G S R LH + AT +A
Sbjct: 522 ALITPSCTYRSTATMETVRVGGDTVTVPRTVDAPVGYDGMSPEVERELHRV-QATEDMAA 580
Query: 493 SRRLAELNDYATAIHLLSSARAVVVQSAE 521
+R AE D+ A +L R V+ A+
Sbjct: 581 ARAAAERGDFELAAAILDERRGVLESRAD 609
>Os10g0464900 Zinc finger, RING-type domain containing protein
Length = 646
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 159/543 (29%), Positives = 216/543 (39%), Gaps = 100/543 (18%)
Query: 38 CGVCSHG-----VKTGAAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAP 92
CG+C HG + G AVFTAECSH FHF CI +CP+C A WR+ P
Sbjct: 6 CGIC-HGDMRRGGRGGGDAVFTAECSHQFHFHCISGTVARGRI----ACPLCHARWRELP 60
Query: 93 FINKRXXXXXXHKR-----------------KSYDDDEPL------LAPKAAAGAFNPIP 129
+ + +DDDEPL L + G +
Sbjct: 61 SFRRGNDAAPPGASASASASAAQPFFRPVEPRVFDDDEPLVRAPRRLGERRHGGGAASVA 120
Query: 130 EDDEDDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAPALRSSPSTR 189
D G AV LA + R + AV V A A
Sbjct: 121 SDGG---------------GGSAVALATHCENSAVARDACREDFAVLVHARAPTGGGGGA 165
Query: 190 A------PIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKRLLP 243
A P+DLVTVLDVS M+G+KL +LK+ M VI +LGP DRL +++FS A RL+
Sbjct: 166 AAEAQRAPLDLVTVLDVSGSMVGNKLALLKQAMGFVIDNLGPGDRLCVISFSSGASRLMR 225
Query: 244 LRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVATVM 303
L RMT G+ A++ V L +A+G +G ALRKA KVL+DR RN V +V+
Sbjct: 226 LSRMTDAGKAHAKRAVGSL----SARGGTN-----IGAALRKAAKVLDDRLYRNAVESVI 276
Query: 304 LLSDTXXXXX----------XXXDXXXXXXXXXXXTRFTHVEIP------IGPGEEPARS 347
LLSD D P G + A
Sbjct: 277 LLSDGQDTYTVPPRGGYDRDANYDALVPPSLVRADAGGGGGRAPPVHTFGFGKDHDAAAM 336
Query: 348 ALVAEEDDDQFS--------EHAFAKCLGGLVSVVMQEVQLELA-FPTG-EITAVYSCGH 397
+AE FS + FA+C+GGL+SV +QE++L++A TG +TAV S +
Sbjct: 337 HTIAEVTGGTFSFIENEAAIQDGFAQCIGGLLSVAVQELRLDVACVDTGVRVTAVKSGRY 396
Query: 398 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPLSQSHPHSLSVRCSYR--EPAS 455
RAP H + V CSYR E
Sbjct: 397 --KSHIEDDGRAAKVDVGELYADEERSFLLFVVVPRAPAWDDVTHLIEVSCSYRDMETGR 454
Query: 456 QETVRGAEQQLVV-PALHGGSSSRRLHDL------FVATRAVAESRRLAELNDYATAIHL 508
+V G E+ +V+ P+ + R ++ A +A +R AE +YA A +
Sbjct: 455 TTSVAGDEEAVVLRPSRAESGVAERSVEVDRELVRVEAIDDIALARAAAERGEYAEAAEI 514
Query: 509 LSS 511
L S
Sbjct: 515 LRS 517
>Os10g0464800
Length = 606
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 166/366 (45%), Gaps = 50/366 (13%)
Query: 38 CGVCSHGVKTGAAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPFINKR 97
C +C G G A+FTAECSH+FH CI CP+C A W P ++
Sbjct: 8 CAIC-LGEIAGGQAIFTAECSHTFHNRCIARNVAHGRRV----CPLCNARWSDVPALSSS 62
Query: 98 XXXXXXHKRKSYDDDEPLLAPKAAAGAFNPIPEDDE--DDATEFRGFFPARPRSGLAVTL 155
+ DDDEP P+ DD+ + A E +GL V
Sbjct: 63 SAAAV----EPDDDDEP------------PLYADDDPVEPAGEQAAATDGDAAAGLVVKA 106
Query: 156 APDAALVSAGRRHGKYVVAVRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRG 215
+ V+ G K+ V V KA ++ ++RAP+DLVTVLDVS M G KL ++K+
Sbjct: 107 HCEYPAVARGASRDKFAVLVHAKAAGAAAAAASRAPLDLVTVLDVSGSMAGRKLALVKKA 166
Query: 216 MRLVIASLGPADRLAIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQ 275
M VI +LGPADRL +V+FS A R L RM+ G+ +A++ V+ LV
Sbjct: 167 MGFVIDNLGPADRLCVVSFSTEASRRTRLLRMSEVGKATAKRAVESLV---------DDS 217
Query: 276 AVCVGDALRKATKVLEDRRDRNPVATVMLLSDTXXXXXXXXDXXXXXXXXXXXTRFTHV- 334
A +GD LR A +VL DRR +N V++V+LLSD F
Sbjct: 218 ATNIGDGLRVAGRVLGDRRHKNAVSSVILLSDGKDSYVVPRRGNGMSYMDLVPPSFASSG 277
Query: 335 ---------EIPIGPGEEPARSALVAEEDDDQFS--------EHAFAKCLGGLVSVVMQE 377
G + A +AE FS + +FA+C+GGL+SV +Q+
Sbjct: 278 GRGQLAPIHTFGFGADHDAAAMNTIAESTGGTFSFVENEAAIQDSFAQCIGGLLSVAVQD 337
Query: 378 VQLELA 383
++ +A
Sbjct: 338 ARIAVA 343
>Os08g0126100
Length = 704
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 161/389 (41%), Gaps = 75/389 (19%)
Query: 36 SRCGVCSHGVKTGAAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPFIN 95
S C C GV + T+ECSH+FH C CP C A WR +
Sbjct: 82 SSCDKC-RGVIDHSQPTVTSECSHTFHLRCFSGSVI---------CPACNARWRDTVAVP 131
Query: 96 KRX-----------------XXXXXHKRKSYDDDEPLLAPKAAAGAFNPIPEDDEDDATE 138
+ YDDDEP+ P AA G
Sbjct: 132 NPSPAPPSTFFPAGVPAPPPTFSPFWVSQEYDDDEPVEPPVAAHGG-------------- 177
Query: 139 FRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAPAL---RSSPSTRAPIDLV 195
G PA L V + V+ +VV V KAP++ ++ + RAP+DLV
Sbjct: 178 --GVAPAS-NGALVVRTHCEHTAVARSVIRDNFVVLVHAKAPSIAVAEATAAARAPVDLV 234
Query: 196 TVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKRLLPLRRMTRQGQRSA 255
TVLDVS M G KL +LKR M VI LGP DRLA+V+FS A+R++ L RM+ G+ SA
Sbjct: 235 TVLDVSGSMEGYKLTLLKRAMGFVIDKLGPGDRLAVVSFSYNAQRVIRLTRMSDDGKASA 294
Query: 256 RQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRRDRNPVATVMLLSDTXXXXXXX 315
+ ++ L AA G + L +A KV + RR RN VA+V+LLSD
Sbjct: 295 KSAMESL---AAGGGTN------ILKGLVEAAKVFDGRRYRNAVASVILLSDGQDTYNVN 345
Query: 316 XDXXXXXXXXXXXT-----------RFTHVEIPIGPGEEPARSALVAEEDDDQFS----- 359
R + G + +AEE FS
Sbjct: 346 GGWGASNSKNYSVLVPPSFKRSGDRRLSVHTFGFGTDHDAVAMNAIAEETGGTFSFIENQ 405
Query: 360 ---EHAFAKCLGGLVSVVMQEVQLELAFP 385
+ AFA+C+GGL+SV +QE ++ + P
Sbjct: 406 AVVQDAFAQCIGGLLSVTVQEARIAITCP 434
>Os08g0126000
Length = 724
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 140/306 (45%), Gaps = 61/306 (19%)
Query: 108 SYDDDEPLLAPKAAAGAFNPIPEDDEDDAT--------EFRGFFPARPRSGLAVTLAPDA 159
+YDD+EP+ +P + G E +D EF + PR AV L
Sbjct: 217 AYDDNEPVESPASRGGGEPGGGEAAANDGELVVIKTHCEFPAIARSTPRDNFAVLL---- 272
Query: 160 ALVSAGRRHGKYVVAVRVKAPALRSSPSTRA-PIDLVTVLDVSQGMMGDKLHMLKRGMRL 218
VKAP++ + + +DLVTVLDVS M G KL +LKR M L
Sbjct: 273 ----------------HVKAPSIAAEAAPARASVDLVTVLDVSGSMEGYKLALLKRAMGL 316
Query: 219 VIASLGPADRLAIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVC 278
LGP DRLA+V+FS +A+R++ L RM+ G+ SA+ V+ L A G
Sbjct: 317 ----LGPGDRLAVVSFSYSARRVIRLTRMSEGGKASAKSAVESL----HADG-----CTN 363
Query: 279 VGDALRKATKVLEDRRDRNPVATVMLLSDTXXXXXXXXDXXXXXXXXXXX------TRFT 332
+ + L +A KV + RR RN VA+V+LLSD R
Sbjct: 364 ILEGLVEAAKVFDGRRYRNAVASVILLSDGQDNYNVNGGWGASNSKNYSVLVPPSFKRSG 423
Query: 333 HVEIPI---GPGEEPARSAL--VAEEDDDQFS--------EHAFAKCLGGLVSVVMQEVQ 379
+P+ G G + SA+ +AEE FS + AFA+C+GGL+SV +QE +
Sbjct: 424 DRRLPVHTFGFGTDHDASAMHTIAEETGGTFSFIENQAVVQDAFAQCIGGLLSVPVQEAR 483
Query: 380 LELAFP 385
+ + P
Sbjct: 484 IAITCP 489
>Os09g0298500 Zinc finger, RING-type domain containing protein
Length = 532
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 131/314 (41%), Gaps = 66/314 (21%)
Query: 35 QSRCGVCSHGVKTGAA--------AVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAA 86
++ C +C + TG+ A+FT++CSHSFHF CI +CP+C A
Sbjct: 80 KNLCAICLEPLSTGSVDIDNGDRPAIFTSQCSHSFHFLCIASNIRHGNV----TCPICRA 135
Query: 87 PWRQAPFINKRXXXXXXHKRKSYDDDEPLLAPKAAAGAFN------PIPEDDEDDATEFR 140
W Q P + + D +L A FN +D+D +
Sbjct: 136 QWSQLP---RDLKVPPLLQNNQSDPILRILDDNIATSRFNRRSSIRAARYNDDDPVEPYT 192
Query: 141 GFFPARPRSGLAVTLAPDAALVSA------GR-----RHGKYVVAVRVKAPALRSSPSTR 189
P A+ +P AA A GR +H +Y + + P + S R
Sbjct: 193 LTEHVDPCLRFALIPSPVAAHHHALGHYPCGRVMPLQQHCQYSSSSMLSPPQIASPSGQR 252
Query: 190 --------AP---IDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAA 238
AP +DLV V + G L +LK+ M L + S+ DRLAIV + A
Sbjct: 253 RAYLSVSLAPQPAMDLVLVASPN----GPHLRLLKQAMALAVFSMRAIDRLAIVTNATTA 308
Query: 239 KRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVG-----DALRKATKVLEDR 293
R PLRRM+ G+R A Q+++ L CVG AL+K K+LEDR
Sbjct: 309 TRAFPLRRMSSHGKRMALQVIEHL--------------CCVGGTDPVGALQKGLKILEDR 354
Query: 294 RDRNPVATVMLLSD 307
+NP + ++ LSD
Sbjct: 355 AHQNPSSCILHLSD 368
>Os12g0203600
Length = 529
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 136/373 (36%), Gaps = 106/373 (28%)
Query: 37 RCGVCSHGVKTGAAAVFTAECSHSFHFPCIXXXXXXXXXXXXXSCPVCAAPWRQAPFINK 96
RC VC + G A +FTAECSH+FH C+ +CPVCA PWR AP
Sbjct: 7 RCPVCFAAMAAGQA-IFTAECSHTFHLRCVPGGAA--------ACPVCATPWRDAP---- 53
Query: 97 RXXXXXXHKRKSYDDDEPLLAPKAAAGAFNPIPEDDEDDATEFRGFFPARPRSGLAVTLA 156
+YDDD+P+ P+ AT R + T
Sbjct: 54 -SPLTTSSIPAAYDDDDPV----------EPV-------ATAARNSSGGGGGVLVLKTHC 95
Query: 157 PDAALVSAGRRHGKYVVAVRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGM 216
AL R G + V V KAPA + + RAP+DLVTVLDVS M GDKL +
Sbjct: 96 EYPALSRGAARDG-FAVLVHAKAPAAAAEAAGRAPLDLVTVLDVSTSMTGDKLAL----- 149
Query: 217 RLVIASLGPADRLAIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQA 276
G+ +A++ VD LV A G
Sbjct: 150 ---------------------------------DGKATAKRAVDALV----ANGNTN--- 169
Query: 277 VCVGDALRKATKVLEDRRDRNPVATVMLLSDTXXXXXXXXDXXXXXXXXXXXTRFTHVEI 336
+ D L KVL+ RR + VA+V+LLSD V +
Sbjct: 170 --IRDGLDVDAKVLDGRRHTDAVASVILLSDGQDNQTMGYRGRFHMTDFKAAATSYDVLV 227
Query: 337 P-------------------IGPGEEPARSALVAEEDDDQFS--------EHAFAKCLGG 369
P G + A ++E FS + FA+C+GG
Sbjct: 228 PPSFTRAGGGERCAPVHAFGFGTDHDAAAMHSISEITGGTFSFIENLAVIQDTFARCIGG 287
Query: 370 LVSVVMQEVQLEL 382
L+SV Q ++ +
Sbjct: 288 LLSVAAQNARISV 300
>Os12g0431700 von Willebrand factor, type A domain containing protein
Length = 524
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 175 VRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAF 234
V +KA SS + R +DLV V+DVS M G K+ +K+ ++ VI L P DRL+IV F
Sbjct: 47 VEIKA---TSSTAVREGLDLVAVVDVSGSMRGHKIESVKKALQFVIMKLTPVDRLSIVTF 103
Query: 235 SGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQAVCVGDALRKATKVLEDRR 294
+AKRL LR MT+ + IV L+ A G + + +G A+ A +V + R
Sbjct: 104 ESSAKRLTKLRAMTQDFRGELDGIVKSLI---ANGGTDIKAGLDLGLAVL-ADRVFTESR 159
Query: 295 DRNPVATVMLLSDTXXXXXXXXDXXXXXXXXXXXTRFTHVEIPIGPGEEPARSALVAEED 354
A + L+SD D F G G + +A+
Sbjct: 160 ----TANIFLMSDGKLEGKTSGDPTQVNPGEVSVYTFG-----FGHGTDHQLLTDIAKNS 210
Query: 355 ---------DDQFSEHAFAKCLGGLVSVVMQEVQLELAFPTGE 388
D FA LGGLV+VV Q+V+L L T +
Sbjct: 211 PGGTYSTVPDGTNLSAPFATLLGGLVTVVAQDVRLTLTPKTAD 253
>Os01g0640200 von Willebrand factor, type A domain containing protein
Length = 589
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 130 EDDEDDATEFRGFFPARPRSGLAVTLAPDAALVSAGRRHGKYVVAVRVKAP-------AL 182
DDE A PARP G+ L R KY V AP L
Sbjct: 4 NDDEQTAPTSTATEPARPTVGITGQLVKQV-------RLNKYHNDVASMAPHDQELLLEL 56
Query: 183 RSSPST--RAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIASLGPADRLAIVAFSGAAKR 240
R S S+ RA +DLV V+DVS M GD++ +K ++ VI L DRL IV F A R
Sbjct: 57 RGSSSSTDRAGLDLVAVIDVSGSMDGDRIDKVKTALQFVIRKLSDLDRLCIVTFCTNATR 116
Query: 241 LLPLRRMTRQGQRSARQIVDRLVVCAAAQ---GQEQPQAVCVGDALRKATKVLEDRRDRN 297
L PLR +T Q + +VD L G E +V G +L V
Sbjct: 117 LCPLRFVTAAAQAELKALVDGLKAYGDTNMKGGLETGMSVVDGRSLAAGRAV-------- 168
Query: 298 PVATVMLLSDTXXXXXXXXDXXXXXXXXXXXTRF--THVEIPIGPGEEPARSALVAEED- 354
+VML+SD F +H + E AR +L +
Sbjct: 169 ---SVMLMSDGYQNHGGDARDVHLKNVPVYTFSFGASHDSNLL---EAIARKSLGGTFNY 222
Query: 355 --DDQFSEHAFAKCLGGLVSVVMQEVQLELAFPTGEIT 390
D F++ LGGL++++ Q+++L + GE+T
Sbjct: 223 VADSANLTGPFSQLLGGLLTIIAQDLELTVTRFHGEVT 260
>Os06g0153400
Length = 375
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 162 VSAGRRHGKYVVAVRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRLVIA 221
+S+ RR K V VRVKAPA + TRAP+DLV VLD+ M +L LK+G + +I
Sbjct: 261 ISSQRRE-KLAVMVRVKAPAY--TKQTRAPLDLVMVLDIGGRMR--ELEQLKQGAKFIIH 315
Query: 222 SLGPADRLAIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRL 262
+L DRL+IV F A RL L MT Q +RS+ V L
Sbjct: 316 NLTQQDRLSIVTFGPRADRLSELTPMTEQDKRSSNDAVQAL 356
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,425,342
Number of extensions: 661302
Number of successful extensions: 2404
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 2380
Number of HSP's successfully gapped: 17
Length of query: 603
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 496
Effective length of database: 11,448,903
Effective search space: 5678655888
Effective search space used: 5678655888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)