Os10g0464500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os10g0464500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.39 | 0.421 | 6.36 | 0.858 | 0.301 | 0.897 | -0.387 | -0.898 | 0.0963 | 16.7 | 23.7 | 419 | -- | -- |
| 81.13 | 0.419 | 6.37 | 0.786 | 0.298 | 1.06 | -0.168 | -- | 0.0687 | 16.7 | 23.04 | 466 | -- | -- |
| 80.67 | 0.418 | 6.37 | 0.822 | 0.298 | 0.93 | -- | -0.691 | 0.0828 | 16.3 | 23.47 | 417 | -- | -- |
| 81.08 | 0.419 | 6.38 | 0.738 | 0.3 | 1.1 | -- | -- | 0.0574 | 16.4 | 22.82 | 423 | -- | -- |
| 84.73 | 0.429 | 6.37 | 0.803 | -- | 0.869 | -- | -0.599 | 0.0678 | -- | 23.3 | 624 | -- | -- |
| 94.55 | 0.456 | 6.41 | 0.485 | 0.236 | -- | -0.0491 | -- | -0.0964 | 15.7 | -- | -- | -- | -- |
| 94.56 | 0.455 | 6.41 | 0.485 | 0.235 | -- | -- | -- | -0.0967 | 15.6 | -- | -- | -- | -- |
| 85.17 | 0.43 | 6.38 | 0.728 | -- | 0.971 | -- | -- | 0.0534 | -- | 23.1 | 659 | -- | -- |
| 93.82 | 0.451 | 6.4 | -- | 0.27 | 0.695 | -- | -- | -0.062 | 16.1 | 23.1 | 410 | -- | -- |
| 97.62 | 0.462 | 6.41 | 0.475 | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
| 100.75 | 0.47 | 6.43 | -- | 0.225 | -- | -- | -- | -0.151 | 15.7 | -- | -- | -- | -- |
| 97.36 | 0.46 | 6.41 | -- | -- | 0.65 | -- | -- | -0.0716 | -- | 23.1 | 583 | -- | -- |
| 103.57 | 0.475 | 6.42 | -- | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.99 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 7 | 75.88 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 8 | 75.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 41 | 77.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 46 | 77.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 47 | 77.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 63 | 78.08 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 15 |
| 86 | 78.47 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 96 | 78.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 104 | 78.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 122 | 78.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 129 | 78.93 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 140 | 79.04 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 165 | 79.13 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 198 | 79.23 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 221 | 79.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 227 | 79.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 251 | 79.44 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 267 | 79.52 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 273 | 79.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 278 | 79.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 283 | 79.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 287 | 79.61 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 304 | 79.66 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 305 | 79.67 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 332 | 79.74 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 333 | 79.75 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 17 |
| 339 | 79.77 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 346 | 79.80 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 361 | 79.84 | temperature | 20 | 270 | > th | dose independent | sin | 6 | NA |
| 362 | 79.84 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 363 | 79.84 | humidity | 80 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 373 | 79.88 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 375 | 79.89 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 386 | 79.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 391 | 79.94 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 409 | 80.00 | humidity | 80 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 425 | 80.05 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 429 | 80.05 | humidity | 80 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 432 | 80.06 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 446 | 80.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 454 | 80.12 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 463 | 80.14 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 464 | 80.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 505 | 80.21 | humidity | 90 | 14400 | < th | dose independent | sin | 11 | NA |
| 522 | 80.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 534 | 80.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 547 | 80.28 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 606 | 80.38 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 608 | 80.39 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 624 | 80.41 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 637 | 80.43 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 645 | 80.44 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 662 | 80.46 | humidity | 90 | 14400 | > th | dose independent | sin | 8 | NA |
| 748 | 80.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 14 |
| 751 | 80.57 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 766 | 80.59 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 777 | 80.60 | radiation | 1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 795 | 80.62 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 808 | 80.63 | radiation | 1 | 4320 | < th | dose independent | rect. | 23 | 11 |
| 826 | 80.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 11 |
| 833 | 80.66 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 867 | 80.68 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 883 | 80.69 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 893 | 80.70 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 904 | 80.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 913 | 80.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 945 | 80.73 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 15 |
| 948 | 80.74 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 954 | 80.74 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 961 | 80.75 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 962 | 80.75 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 965 | 80.75 | radiation | 1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 966 | 80.75 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 969 | 80.75 | radiation | 1 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 972 | 80.76 | radiation | 1 | 4320 | < th | dose independent | sin | 10 | NA |