Os04g0101800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os04g0101800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.71 | 0.503 | 7.18 | 0.661 | 0.321 | 1.11 | -0.68 | -0.962 | 0.135 | 5.64 | 23.2 | 5826 | -- | -- |
| 115.18 | 0.5 | 7.14 | 0.947 | 0.316 | 1.04 | -0.675 | -- | 0.2 | 5.62 | 22.71 | 5805 | -- | -- |
| 115.83 | 0.501 | 7.18 | 0.637 | 0.315 | 1.11 | -- | -1.05 | 0.139 | 5.8 | 23.3 | 5799 | -- | -- |
| 116.33 | 0.502 | 7.14 | 0.938 | 0.319 | 1.04 | -- | -- | 0.201 | 5.77 | 22.7 | 5826 | -- | -- |
| 120.61 | 0.512 | 7.18 | 0.629 | -- | 1.13 | -- | -1.11 | 0.159 | -- | 23.47 | 5681 | -- | -- |
| 153.06 | 0.58 | 7.09 | 1.39 | 0.354 | -- | -0.607 | -- | 0.419 | 5.47 | -- | -- | -- | -- |
| 153.97 | 0.581 | 7.09 | 1.39 | 0.35 | -- | -- | -- | 0.422 | 5.41 | -- | -- | -- | -- |
| 121.14 | 0.513 | 7.14 | 0.941 | -- | 1.06 | -- | -- | 0.217 | -- | 22.8 | 5690 | -- | -- |
| 123.81 | 0.518 | 7.24 | -- | 0.321 | 1.68 | -- | -- | -0.235 | 5.74 | 9.333 | 12900 | -- | -- |
| 160.35 | 0.592 | 7.1 | 1.4 | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
| 204.69 | 0.669 | 7.13 | -- | 0.373 | -- | -- | -- | 0.268 | 5.26 | -- | -- | -- | -- |
| 129.02 | 0.529 | 7.25 | -- | -- | 1.66 | -- | -- | -0.224 | -- | 14.59 | 12840 | -- | -- |
| 211.98 | 0.68 | 7.13 | -- | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 3 | 116.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 17 |
| 6 | 117.21 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 117.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 18 | 117.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 32 | 117.76 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 34 | 117.79 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 35 | 117.81 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 39 | 117.85 | temperature | 15 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 49 | 117.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 22 |
| 51 | 117.96 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 68 | 118.06 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 18 |
| 71 | 118.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 15 |
| 92 | 118.17 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 97 | 118.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 123 | 118.27 | temperature | 20 | 4320 | > th | dose dependent | sin | 20 | NA |
| 168 | 118.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 169 | 118.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 12 |
| 221 | 118.41 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 22 |
| 245 | 118.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 248 | 118.44 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 9 |
| 272 | 118.46 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 22 |
| 305 | 118.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 319 | 118.50 | temperature | 25 | 4320 | > th | dose dependent | sin | 5 | NA |
| 332 | 118.51 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 353 | 118.53 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 367 | 118.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 368 | 118.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 430 | 118.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 989 | 118.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |