BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0820600 Os03g0820600|AK058941
(139 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 288 6e-79
AK105744 288 6e-79
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 183 3e-47
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 175 1e-44
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 172 7e-44
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 168 1e-42
Os03g0820500 Similar to WCOR719 160 3e-40
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 160 4e-40
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 155 8e-39
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 137 3e-33
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 131 2e-31
Os07g0297500 112 1e-25
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 288 bits (738), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 VQATDAGEISLDALKDRVK 139
VQATDAGEISLDALKDRVK
Sbjct: 121 VQATDAGEISLDALKDRVK 139
>AK105744
Length = 139
Score = 288 bits (738), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL
Sbjct: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE
Sbjct: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
Query: 121 VQATDAGEISLDALKDRVK 139
VQATDAGEISLDALKDRVK
Sbjct: 121 VQATDAGEISLDALKDRVK 139
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 114/138 (82%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MANS+SG+A+ D+CKLKF EL+SKR RFITF +D + ++++VD++G +Y+DFT+S+
Sbjct: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+A++DFDF+T E+ KS+IF+I WSPD +KVRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 VQATDAGEISLDALKDRV 138
+QATD E+S+D +K R
Sbjct: 121 LQATDPSEMSMDIVKARA 138
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 112/137 (81%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
M+NS+SG+A+ D+CKLKF EL++KR RFI F ++ K ++++VD++G SY+DFT+ L
Sbjct: 1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+A++DFDF+T E+ KS+IF+I W+PD ++VRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 VQATDAGEISLDALKDR 137
+QATD E+S+D +K R
Sbjct: 121 LQATDPSEMSMDIVKSR 137
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 172 bits (436), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 106/138 (76%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MANS+SG+A++D+CK KF EL+++R RFI F +D+K EI V+++G YEDF ++L
Sbjct: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATL 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+A+YD DF+T E+ KS+IF+ WSPD A+ RSKMLYASS +RF++EL+GIQ E
Sbjct: 61 PADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCE 120
Query: 121 VQATDAGEISLDALKDRV 138
+QATD E+SLD ++ R
Sbjct: 121 IQATDPSEMSLDIIRARA 138
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 168 bits (426), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 105/136 (77%)
Query: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
AN+SSG+ + +CK F ELQ K+ HR++ F +D+K KE++V+K G T S++DF SLP
Sbjct: 8 ANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLP 67
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
E DCR+AIYDFDF+T E+ KS+IF++ WSP +++R+KMLYA+S ERF++EL+G+ E+
Sbjct: 68 ESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEI 127
Query: 122 QATDAGEISLDALKDR 137
QATD E+ ++ L++R
Sbjct: 128 QATDPSELDIELLRER 143
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 160 bits (405), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 107/147 (72%), Gaps = 11/147 (7%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MAN++SGVA+ ++CK +F EL++ R HRF+ F +D+ ++++VD++G R +++ T+SL
Sbjct: 1 MANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASL 60
Query: 61 PEGDCRFAIYDFDFLTAE-----------DVPKSRIFYILWSPDNAKVRSKMLYASSNER 109
P CR+A+YD DF ++ + P+S+IF++ WSP A VRSKM+YASSNE
Sbjct: 61 PADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEG 120
Query: 110 FKKELNGIQLEVQATDAGEISLDALKD 136
FKKEL+G+Q+++QATD E++LD LKD
Sbjct: 121 FKKELDGVQIDLQATDPSELTLDVLKD 147
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 160 bits (404), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 111/137 (81%)
Query: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
AN++SG+A+ D+CKLKF EL++KR +RFI + +D K K ++V+K+G+ +Y+DF +SLP
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
+CR+AI+D+DF+T E+ KS+IF+I WSPD ++VRSKM+YASS +RFK+EL+GIQ+E+
Sbjct: 61 ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 120
Query: 122 QATDAGEISLDALKDRV 138
QATD E+ LD ++ R
Sbjct: 121 QATDPTEVGLDVIRGRA 137
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 155 bits (392), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 102/136 (75%)
Query: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
+N+SSG+ + D + F ELQ K+ R++ F ++ K K+++V+K G T SY+DF +SLP
Sbjct: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
E DCR+A+YDFDF+T E+V KS+IF+I WSP +++R+KMLY++S +R K+EL+G E+
Sbjct: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
Query: 122 QATDAGEISLDALKDR 137
QATD E+ L+ L++R
Sbjct: 128 QATDPTEVDLEVLRER 143
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 97/136 (71%)
Query: 4 SSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG 63
++ G+ + ++C+ F E++ K++HRF+ + +D + + ++VDK+G YE+ ++LP
Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
Query: 64 DCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQA 123
DCR+A++DFDF+T ++ KS+IF+I WSP +++R+K+LYA+S + ++ L+G+ EVQA
Sbjct: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
Query: 124 TDAGEISLDALKDRVK 139
TD+ E+ D ++ R +
Sbjct: 128 TDSSEMGYDVIRGRAQ 143
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 95/136 (69%)
Query: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
S + + + + K F EL+ +++HR++ F +D++ +EI+V+K G SY+DFT+SLP
Sbjct: 12 GGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP 71
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
DCR+A+YD DF++ ++ KS+IF+I WSP +++R+K +YA S +F+ EL+G+ E+
Sbjct: 72 ADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEI 131
Query: 122 QATDAGEISLDALKDR 137
QATD ++ L+ L+ R
Sbjct: 132 QATDPDDMDLEVLRGR 147
>Os07g0297500
Length = 169
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 88/136 (64%), Gaps = 4/136 (2%)
Query: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
S + + + + K F EL +++HR++ F +D++ +EI+V+K G SY+DFT+SLP
Sbjct: 34 GGSPAWIEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP 93
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
A+YD DF++ ++ KS+IF+I WSP + +R+K +YA +F+ EL+G+ E+
Sbjct: 94 AD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEI 149
Query: 122 QATDAGEISLDALKDR 137
QATD ++ L+ L+ R
Sbjct: 150 QATDPDDMDLEVLRGR 165
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,194,424
Number of extensions: 151812
Number of successful extensions: 310
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 308
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 49
Effective length of database: 12,336,541
Effective search space: 604490509
Effective search space used: 604490509
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 151 (62.8 bits)