BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0803500 Os03g0803500|AK059759
(299 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 584 e-167
Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain con... 399 e-111
Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain con... 383 e-107
Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain con... 335 2e-92
Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-... 324 4e-89
Os03g0166100 247 7e-66
Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit... 246 1e-65
Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain con... 238 4e-63
Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain con... 205 3e-53
Os03g0761900 Similar to Prolyl 4-hydroxylase 186 1e-47
Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 167 8e-42
>Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 299
Score = 584 bits (1505), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 22 SRPDGGGGGFYDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGK 81
SRPDGGGGGFYDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGK
Sbjct: 22 SRPDGGGGGFYDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGK 81
Query: 82 SIMSQVRTSSGTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDY 141
SIMSQVRTSSGTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDY
Sbjct: 82 SIMSQVRTSSGTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDY 141
Query: 142 FHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPK 201
FHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPK
Sbjct: 142 FHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPK 201
Query: 202 KGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDEN 261
KGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDEN
Sbjct: 202 KGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDEN 261
Query: 262 ERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVCDA 299
ERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVCDA
Sbjct: 262 ERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVCDA 299
>Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 308
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/268 (69%), Positives = 223/268 (83%), Gaps = 3/268 (1%)
Query: 32 YDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSS 91
+DP+RV QLSWRPRAFL+ GFL+ EC+HL++LAK ++EKSMVADN+SGKS+MS+VRTSS
Sbjct: 40 FDPSRVVQLSWRPRAFLHKGFLTDAECEHLISLAKDKLEKSMVADNESGKSVMSEVRTSS 99
Query: 92 GTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRG 151
G FL K +D++V+ IE+R+AAWTFLP +N ESIQILHY+ G+KY+ H+DYFHDKNN G
Sbjct: 100 GMFLEKKQDEVVARIEERIAAWTFLPPDNGESIQILHYQNGEKYEPHYDYFHDKNNQALG 159
Query: 152 GHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSL 211
GHR+ATVLMYL+DV KGGET+FP A G+ LQ KD+TWSDCA++G AVKP KGDALLFFSL
Sbjct: 160 GHRIATVLMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCAKNGYAVKPVKGDALLFFSL 219
Query: 212 HVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFD--NPPDVSLDLPCSDENERCTRWAA 269
H +ATTD SLHGSCPVIEG+KWSATKWIHVRSFD S D C DEN C +WAA
Sbjct: 220 HPDATTDSDSLHGSCPVIEGQKWSATKWIHVRSFDISVKQGASTD-GCEDENVLCPQWAA 278
Query: 270 VGECYRNPKYMVGTKDSLGFCRKSCGVC 297
VGEC +NP YMVGT ++ GFCRKSC VC
Sbjct: 279 VGECAKNPNYMVGTNEAPGFCRKSCNVC 306
>Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 319
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/268 (66%), Positives = 212/268 (79%)
Query: 32 YDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSS 91
++ +RV +SWRPR F+Y GFLS DECDHLV L K +M++SMVADN SGKS+MS+VRTSS
Sbjct: 52 FNASRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSS 111
Query: 92 GTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRG 151
G FL K +D +VS IEKR+AAWTFLPEENAE+IQIL YE GQKY+ HFDYFHDK N G
Sbjct: 112 GMFLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALG 171
Query: 152 GHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSL 211
GHR ATVLMYL+ V+KGGETVFPNA G Q KD+T+S+CA+ GLAVKP KGD +LFFSL
Sbjct: 172 GHRYATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSL 231
Query: 212 HVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDENERCTRWAAVG 271
H++ DP SLHGSCPVIEGEKWSA KWI +RS+++PP + CSD + RC +WA G
Sbjct: 232 HIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEGCSDNSARCAKWAEAG 291
Query: 272 ECYRNPKYMVGTKDSLGFCRKSCGVCDA 299
EC +NP YMVG + G CRKSCGVCD+
Sbjct: 292 ECEKNPVYMVGAEGLPGNCRKSCGVCDS 319
>Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 241
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/227 (70%), Positives = 187/227 (82%), Gaps = 3/227 (1%)
Query: 73 MVADNDSGKSIMSQVRTSSGTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELG 132
MVADN+SGKS+MS+VRTSSG FL K +D++V+ IE+R+AAWTFLP +N ESIQILHY+ G
Sbjct: 1 MVADNESGKSVMSEVRTSSGMFLEKKQDEVVARIEERIAAWTFLPPDNGESIQILHYQNG 60
Query: 133 QKYDAHFDYFHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCA 192
+KY+ H+DYFHDKNN GGHR+ATVLMYL+DV KGGET+FP A G+ LQ KD+TWSDCA
Sbjct: 61 EKYEPHYDYFHDKNNQALGGHRIATVLMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCA 120
Query: 193 RSGLAVKPKKGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFD--NPPD 250
++G AVKP KGDALLFFSLH +ATTD SLHGSCPVIEG+KWSATKWIHVRSFD
Sbjct: 121 KNGYAVKPVKGDALLFFSLHPDATTDSDSLHGSCPVIEGQKWSATKWIHVRSFDISVKQG 180
Query: 251 VSLDLPCSDENERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVC 297
S D C DEN C +WAAVGEC +NP YMVGT ++ GFCRKSC VC
Sbjct: 181 ASTD-GCEDENVLCPQWAAVGECAKNPNYMVGTNEAPGFCRKSCNVC 226
>Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-like protein
Length = 319
Score = 324 bits (831), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 197/267 (73%), Gaps = 5/267 (1%)
Query: 34 PARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSSGT 93
P Q+SW+PR FLY FLS DE +HLV+LA+ +++S VADN SGKS +S RTSSGT
Sbjct: 55 PHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDARTSSGT 114
Query: 94 FLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGGH 153
F+ K +D IV+GIE+++AAWTFLP+EN E IQ+L Y+ G+KY+ H+DYF D N RGGH
Sbjct: 115 FIRKSQDPIVAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFSDNVNTLRGGH 174
Query: 154 RVATVLMYLTDVKKGGETVFPNA---AGRHLQLKDETWSDCARSGLAVKPKKGDALLFFS 210
R+ATVLMYLTDV +GGETVFP A +D T S+CA+ G+AVKP+KGDALLFF+
Sbjct: 175 RIATVLMYLTDVAEGGETVFPLAEEFTESGTNNEDSTLSECAKKGVAVKPRKGDALLFFN 234
Query: 211 LHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDENERCTRWAAV 270
L +A+ D SLH CPVI+GEKWSATKWI V SFD + C+D+NE C +WAA+
Sbjct: 235 LSPDASKDSLSLHAGCPVIKGEKWSATKWIRVASFDKVYHTQGN--CTDDNESCEKWAAL 292
Query: 271 GECYRNPKYMVGTKDSLGFCRKSCGVC 297
GEC +NP+YM+GT G+CRKSC +C
Sbjct: 293 GECIKNPEYMIGTAALPGYCRKSCNIC 319
>Os03g0166100
Length = 277
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 153/220 (69%), Gaps = 21/220 (9%)
Query: 32 YDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAK-GRMEKSMVADNDSGKSIMSQVRTS 90
+D +R +SWRPRAFLY GFLS ECDHL++LAK G+MEKS V D +SG+S+ S+VRTS
Sbjct: 37 FDASRAVDVSWRPRAFLYEGFLSDAECDHLISLAKQGKMEKSTVVDGESGESVTSKVRTS 96
Query: 91 SGTFLSKHEDDIVSGIEKRVAAWTFLP-----------------EENAESIQILHYELGQ 133
SG FL K +D++V+ IE+R+AAWT LP EN ES+QIL Y G+
Sbjct: 97 SGMFLDKKQDEVVARIEERIAAWTMLPTECIIFYCFANFAILKLSENGESMQILRYGQGE 156
Query: 134 KYDAHFDYFHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCAR 193
KY+ HFDY + R G RVATVLMYL++VK G +++ P A R Q KDETWSDCA
Sbjct: 157 KYEPHFDYISGRQGSTREGDRVATVLMYLSNVKMG-DSLLPQA--RLSQPKDETWSDCAE 213
Query: 194 SGLAVKPKKGDALLFFSLHVNATTDPASLHGSCPVIEGEK 233
G AVKP KG A+LFFSLH NAT D SLHGSCPVIEGEK
Sbjct: 214 QGFAVKPAKGSAVLFFSLHPNATLDTDSLHGSCPVIEGEK 253
>Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit-like protein
Length = 321
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 153/207 (73%), Gaps = 1/207 (0%)
Query: 40 LSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSSGTFLSKHE 99
LSW PRAFLY FLS +EC++L++LAK M+KS V D +G S S+VRTSSG FL + +
Sbjct: 113 LSWEPRAFLYHNFLSKEECEYLISLAKPHMKKSTVVDASTGGSKDSRVRTSSGMFLGRGQ 172
Query: 100 DDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGGHRVATVL 159
D I+ IEKR++ +TF+P EN E +Q+LHYE+GQKY+ HFDYFHD+ N K GG R+AT+L
Sbjct: 173 DKIIRTIEKRISDYTFIPVENGEGLQVLHYEVGQKYEPHFDYFHDEFNTKNGGQRIATLL 232
Query: 160 MYLTDVKKGGETVFPNAAGRHLQLK-DETWSDCARSGLAVKPKKGDALLFFSLHVNATTD 218
MYL+DV++GGET+FP++ S+CA+ GLAVKPK GDALLF+S+ + + D
Sbjct: 233 MYLSDVEEGGETIFPSSKANSSSSPFYNELSECAKKGLAVKPKMGDALLFWSMRPDGSLD 292
Query: 219 PASLHGSCPVIEGEKWSATKWIHVRSF 245
SLHG CPVI+G KWS+TKW+ V +
Sbjct: 293 ATSLHGGCPVIKGNKWSSTKWMRVHEY 319
>Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 303
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 167/267 (62%), Gaps = 19/267 (7%)
Query: 32 YDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSS 91
+DP++ +LSW PR FLY GFLS ECDHLV++ +G ME S+ + S + +
Sbjct: 55 FDPSKSKRLSWHPRIFLYEGFLSDMECDHLVSMGRGNMESSLAFTDGDRNSSYNNI---- 110
Query: 92 GTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRG 151
ED +VS IE R++ W+FLP+EN ESIQ+L Y + + ++ G
Sbjct: 111 -------EDIVVSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSG 158
Query: 152 GHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSL 211
HR+AT+LMYL+DVK+GGETVFP + + Q K+ S C SG AV+P KG+A+L F+L
Sbjct: 159 AHRLATILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQC--SGYAVRPAKGNAILLFNL 216
Query: 212 HVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNP-PDVSLDLPCSDENERCTRWAAV 270
+ TD S + CPV+EGEKW A K I++R FD P ++ + C+DE++RC WAA
Sbjct: 217 RPDGETDKDSQYEECPVLEGEKWLAIKHINLRKFDYPKSSLASEDECTDEDDRCVSWAAS 276
Query: 271 GECYRNPKYMVGTKDSLGFCRKSCGVC 297
GEC RNP +M+G+ D G CRKSC VC
Sbjct: 277 GECDRNPVFMIGSSDYYGSCRKSCRVC 303
>Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 267
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 138/213 (64%), Gaps = 17/213 (7%)
Query: 40 LSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSSGTFLSKHE 99
+SW PR ++ FLS +ECD+L ++A+ R++ S V D +GK + S VRTSSG F+S E
Sbjct: 64 ISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFVSSEE 123
Query: 100 DD--IVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGGHRVAT 157
++ IEKR++ ++ +PEEN E IQ+L YE Q Y H DYF D N+KRGG RVAT
Sbjct: 124 RKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRVAT 183
Query: 158 VLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCA-----RSGLAVKPKKGDALLFFSLH 212
+LMYLTD +GGET FP A +C+ GL VKP KGDA+LF+S+
Sbjct: 184 MLMYLTDGVEGGETHFPQAGD----------GECSCGGKMVKGLCVKPNKGDAVLFWSMG 233
Query: 213 VNATTDPASLHGSCPVIEGEKWSATKWIHVRSF 245
++ TD S+HG CPV+EGEKWSATKW+ + F
Sbjct: 234 LDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
>Os03g0761900 Similar to Prolyl 4-hydroxylase
Length = 310
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 134/212 (63%), Gaps = 14/212 (6%)
Query: 40 LSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVA-----DNDSGKSIMSQVRTSSGTF 94
LSW+PRA + F + +C+++V AK R+ S +A +S K I RTSSGTF
Sbjct: 103 LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGI----RTSSGTF 158
Query: 95 LSKHEDDI--VSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGG 152
LS ED ++ +EK++A T +P + E IL YE+GQ+Y +H+D F +
Sbjct: 159 LSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKS 218
Query: 153 HRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSLH 212
RVA+ L+YLTDV++GGET+FP G ++ + + + C GL VKP+KGD LLF+SL
Sbjct: 219 QRVASFLLYLTDVEEGGETMFPYENGENMDIGYD-YEKCI--GLKVKPRKGDGLLFYSLM 275
Query: 213 VNATTDPASLHGSCPVIEGEKWSATKWIHVRS 244
VN T DP SLHGSCPVI+GEKW ATKWI +S
Sbjct: 276 VNGTIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
>Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 135
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 178 GRHLQLKDETWSDCARSGLAVKPKKGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSAT 237
R Q KDETWSDCA G AVKP KG A+LFFSL+ NAT DP SLHGSCPVI+GEKWSAT
Sbjct: 15 ARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSAT 74
Query: 238 KWIHVRSFDNPPDVSLDLPCSDENERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVC 297
KWIHVRS+D S D C D++ C+ WAA GEC +NP YMVGT +S GFCRKSC VC
Sbjct: 75 KWIHVRSYDENGRRSSD-KCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCNVC 133
Query: 298 DA 299
+
Sbjct: 134 TS 135
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,388,413
Number of extensions: 499530
Number of successful extensions: 1120
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1102
Number of HSP's successfully gapped: 11
Length of query: 299
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 199
Effective length of database: 11,814,401
Effective search space: 2351065799
Effective search space used: 2351065799
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)