BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0780400 Os03g0780400|AK073162
(145 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-... 303 3e-83
Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-... 237 3e-63
Os02g0663800 Similar to Actin-depolymerizing factor (ADF) 186 6e-48
Os04g0555700 Similar to Actin-depolymerizing factor (ADF) 177 3e-45
Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-... 175 9e-45
Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF ... 175 1e-44
Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2) 172 7e-44
Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-... 166 6e-42
Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF ... 155 8e-39
AK105744 155 8e-39
Os07g0297500 152 7e-38
Os03g0820500 Similar to WCOR719 132 7e-32
>Os03g0780400 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 303 bits (776), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYD 60
MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYD
Sbjct: 1 MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYD 60
Query: 61 DFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
DFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL
Sbjct: 61 DFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
Query: 121 DGFHYEIQATDPTEVDLEVLRERAH 145
DGFHYEIQATDPTEVDLEVLRERAH
Sbjct: 121 DGFHYEIQATDPTEVDLEVLRERAH 145
>Os12g0628100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 145
Score = 237 bits (604), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 132/145 (91%)
Query: 1 MAFMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYD 60
MAF+RS +NASSG+GVA + + TFLELQ KK+ RYVIFKI++K K+VVVEKTG++TES+D
Sbjct: 1 MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD 60
Query: 61 DFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
DF+ SLPE+DCRYA+YDFDFVT EN QKSKIFF+AWSPS SRIRAKMLY+TSK+R ++EL
Sbjct: 61 DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
Query: 121 DGFHYEIQATDPTEVDLEVLRERAH 145
DG HYEIQATDP+E+D+E+LRERAH
Sbjct: 121 DGVHYEIQATDPSELDIELLRERAH 145
>Os02g0663800 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 186 bits (471), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 112/137 (81%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
SN++SGM V + + FLEL+ K++FR+++FKI EK +QVVV++ G ESYDDF A LP
Sbjct: 2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP 61
Query: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
++CRYA++DFDFVT EN QKSKIFFI+W+P TSR+R+KMLY++SKDR K+ELDG E+
Sbjct: 62 ADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPTEVDLEVLRERA 144
QATDP+E+ +++++ RA
Sbjct: 122 QATDPSEMSMDIVKSRA 138
>Os04g0555700 Similar to Actin-depolymerizing factor (ADF)
Length = 139
Score = 177 bits (449), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 112/137 (81%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
+N++SGM V + + F EL+ K++FR++ FKI+E+ +QVVV++ G ++YDDF AS+P
Sbjct: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
Query: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
++CRYA++DFDFVT EN QKSKIFFI+WSP TS++R+KMLY++SKDR K+ELDG E+
Sbjct: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
Query: 128 QATDPTEVDLEVLRERA 144
QATDP+E+ +++++ RA
Sbjct: 122 QATDPSEMSMDIVKARA 138
>Os10g0521100 Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6)
Length = 151
Score = 175 bits (444), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 104/125 (83%)
Query: 21 RDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDF 80
+ F EL+ +K RYVIFKI+++++++VVEKTGA ESYDDF ASLP +DCRYA+YD DF
Sbjct: 25 KSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDF 84
Query: 81 VTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVL 140
V+ +N +KSKIFFI+WSPS SRIRAK +Y+ S+++ + ELDG H+EIQATDP ++DLEVL
Sbjct: 85 VSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVL 144
Query: 141 RERAH 145
R RA+
Sbjct: 145 RGRAN 149
>Os07g0484200 Similar to Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)
Length = 139
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 108/138 (78%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
+N++SG+ V + + F EL+ ++ FR+++FKI++K ++ VE+ G T E Y+DF A+LP
Sbjct: 2 ANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP 61
Query: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
++CRYA+YD DFVT EN QKSKIFF +WSP T+R R+KMLY++SKDR ++ELDG EI
Sbjct: 62 ADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEI 121
Query: 128 QATDPTEVDLEVLRERAH 145
QATDP+E+ L+++R RAH
Sbjct: 122 QATDPSEMSLDIIRARAH 139
>Os05g0113400 Similar to Actin-depolymerizing factor 2 (ADF 2)
Length = 138
Score = 172 bits (437), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 113/138 (81%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
+NA+SGM V + + FLEL+ K+ +R++I+KI+EK+K VVVEK G +YDDF ASLP
Sbjct: 1 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 60
Query: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
N+CRYA++D+DFVT EN QKSKIFFIAWSP TSR+R+KM+Y++SKDR K+ELDG E+
Sbjct: 61 ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 120
Query: 128 QATDPTEVDLEVLRERAH 145
QATDPTEV L+V+R RA+
Sbjct: 121 QATDPTEVGLDVIRGRAN 138
>Os03g0243100 Similar to Actin-depolymerizing factor 5 (ADF-5) (AtADF5)
Length = 143
Score = 166 bits (420), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 107/140 (76%)
Query: 6 SHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLAS 65
++ A+ GM V + + F+E++ KK R+V++KI+E+ + V+V+K G E Y++ +A+
Sbjct: 4 AYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAA 63
Query: 66 LPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHY 125
LP +DCRYA++DFDFVT +N QKSKIFFIAWSP+ SRIRAK+LY+TSK +++ LDG HY
Sbjct: 64 LPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHY 123
Query: 126 EIQATDPTEVDLEVLRERAH 145
E+QATD +E+ +V+R RA
Sbjct: 124 EVQATDSSEMGYDVIRGRAQ 143
>Os03g0820600 Similar to Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)
Length = 139
Score = 155 bits (392), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 102/136 (75%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
+N+SSG+ + D + F ELQ K+ R++ F ++ K K+++V+K G T SY+DF +SLP
Sbjct: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
Query: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
E DCR+A+YDFDF+T E+V KS+IF+I WSP +++R+KMLY++S +R K+EL+G E+
Sbjct: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
Query: 128 QATDPTEVDLEVLRER 143
QATD E+ L+ L++R
Sbjct: 122 QATDAGEISLDALKDR 137
>AK105744
Length = 139
Score = 155 bits (392), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 102/136 (75%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
+N+SSG+ + D + F ELQ K+ R++ F ++ K K+++V+K G T SY+DF +SLP
Sbjct: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
Query: 68 ENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEI 127
E DCR+A+YDFDF+T E+V KS+IF+I WSP +++R+KMLY++S +R K+EL+G E+
Sbjct: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
Query: 128 QATDPTEVDLEVLRER 143
QATD E+ L+ L++R
Sbjct: 122 QATDAGEISLDALKDR 137
>Os07g0297500
Length = 169
Score = 152 bits (385), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 97/125 (77%), Gaps = 4/125 (3%)
Query: 21 RDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDF 80
+ F EL +K RYVIFKI+++++++VVEKTGA ESYDDF ASLP + A+YD DF
Sbjct: 47 KSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDF 102
Query: 81 VTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVL 140
V+ +N +KSKIFFI+WSPS S IRAK +Y+ +++ + ELDG H+EIQATDP ++DLEVL
Sbjct: 103 VSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVL 162
Query: 141 RERAH 145
R RA+
Sbjct: 163 RGRAN 167
>Os03g0820500 Similar to WCOR719
Length = 150
Score = 132 bits (333), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 98/146 (67%), Gaps = 11/146 (7%)
Query: 8 SNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLP 67
+NA+SG+ V+ + + F EL+ +A R+V+FKI++ +QVVV++ G +D+ ASLP
Sbjct: 2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLP 61
Query: 68 ENDCRYALYDFDFVTGENVQ-----------KSKIFFIAWSPSTSRIRAKMLYSTSKDRI 116
+ CRYA+YD DF + +SKIFF++WSP+ + +R+KM+Y++S +
Sbjct: 62 ADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGF 121
Query: 117 KQELDGFHYEIQATDPTEVDLEVLRE 142
K+ELDG ++QATDP+E+ L+VL++
Sbjct: 122 KKELDGVQIDLQATDPSELTLDVLKD 147
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,399,576
Number of extensions: 155766
Number of successful extensions: 424
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 422
Number of HSP's successfully gapped: 12
Length of query: 145
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 54
Effective length of database: 12,284,327
Effective search space: 663353658
Effective search space used: 663353658
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 151 (62.8 bits)