BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0761900 Os03g0761900|AK109047
(310 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0761900 Similar to Prolyl 4-hydroxylase 585 e-167
Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 186 1e-47
Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit... 174 1e-43
Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain con... 172 4e-43
Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-... 166 2e-41
Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain con... 166 2e-41
Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain con... 163 2e-40
Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain con... 138 5e-33
Os03g0166100 128 7e-30
Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain con... 101 6e-22
Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 75 5e-14
>Os03g0761900 Similar to Prolyl 4-hydroxylase
Length = 310
Score = 585 bits (1507), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 30 LMRTRLRLPVVLLSCSLFFLAGFFGSILFTQDPQGEEELDTPMRRERLMEAAWPGMAYGE 89
LMRTRLRLPVVLLSCSLFFLAGFFGSILFTQDPQGEEELDTPMRRERLMEAAWPGMAYGE
Sbjct: 30 LMRTRLRLPVVLLSCSLFFLAGFFGSILFTQDPQGEEELDTPMRRERLMEAAWPGMAYGE 89
Query: 90 SGEPEPSLIPYQILSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTK 149
SGEPEPSLIPYQILSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTK
Sbjct: 90 SGEPEPSLIPYQILSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTK 149
Query: 150 GIRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFD 209
GIRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFD
Sbjct: 150 GIRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFD 209
Query: 210 PAQYGPQKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGYDYEKCIGLKVKPRKGDGL 269
PAQYGPQKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGYDYEKCIGLKVKPRKGDGL
Sbjct: 210 PAQYGPQKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGYDYEKCIGLKVKPRKGDGL 269
Query: 270 LFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIRDKSKAV 310
LFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIRDKSKAV
Sbjct: 270 LFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIRDKSKAV 310
>Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 299
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 134/212 (63%), Gaps = 14/212 (6%)
Query: 103 LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGI----RTSSGTF 158
LSW+PRA + F + +C+++V AK R+ S +A +S K I RTSSGTF
Sbjct: 40 LSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVA-----DNDSGKSIMSQVRTSSGTF 94
Query: 159 LSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKS 218
LS ED ++ +EK++A T +P + E IL YE+GQ+Y +H+D F +
Sbjct: 95 LSKHEDDI--VSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGG 152
Query: 219 QRVASFLLYLTDVEEGGETMFPYENGENMDIGYD-YEKCI--GLKVKPRKGDGLLFYSLM 275
RVA+ L+YLTDV++GGET+FP G ++ + + + C GL VKP+KGD LLF+SL
Sbjct: 153 HRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSLH 212
Query: 276 VNGTIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
VN T DP SLHGSCPVI+GEKW ATKWI +S
Sbjct: 213 VNATTDPASLHGSCPVIEGEKWSATKWIHVRS 244
>Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit-like protein
Length = 321
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 135/225 (60%), Gaps = 14/225 (6%)
Query: 85 MAYGESGEPEPSLIPYQILSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLA-LRKGE 143
M GE GEP ++LSW+PRA + F + ++CE ++ AK + ST+ G
Sbjct: 100 MRGGEKGEPWT-----EVLSWEPRAFLYHNFLSKEECEYLISLAKPHMKKSTVVDASTGG 154
Query: 144 TEESTKGIRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYAS 203
+++S +RTSSG FL +D + +EK+I+ T IP +GE +L YE+GQ+Y
Sbjct: 155 SKDSR--VRTSSGMFLGRGQDKI--IRTIEKRISDYTFIPVENGEGLQVLHYEVGQKYEP 210
Query: 204 HYDAFDPAQYGPQKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGY--DYEKCI--GL 259
H+D F QR+A+ L+YL+DVEEGGET+FP + + + +C GL
Sbjct: 211 HFDYFHDEFNTKNGGQRIATLLMYLSDVEEGGETIFPSSKANSSSSPFYNELSECAKKGL 270
Query: 260 KVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIR 304
VKP+ GD LLF+S+ +G++D TSLHG CPVIKG KW +TKW+R
Sbjct: 271 AVKPKMGDALLFWSMRPDGSLDATSLHGGCPVIKGNKWSSTKWMR 315
>Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 319
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 128/210 (60%), Gaps = 6/210 (2%)
Query: 101 QILSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGIRTSSGTFLS 160
+ +SW+PR + F + +C+++VK K+++ S +A K ++ +RTSSG FL
Sbjct: 58 RAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSE-VRTSSGMFLD 116
Query: 161 SDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKSQR 220
+DP ++ +EK+IA T +P + E ILRYE GQ+Y H+D F R
Sbjct: 117 KRQDPV--VSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHR 174
Query: 221 VASFLLYLTDVEEGGETMFPYENG-ENMDIGYDYEKCI--GLKVKPRKGDGLLFYSLMVN 277
A+ L+YL+ VE+GGET+FP G EN + +C GL VKP KGD +LF+SL ++
Sbjct: 175 YATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHID 234
Query: 278 GTIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
G DP SLHGSCPVI+GEKW A KWIR +S
Sbjct: 235 GVPDPLSLHGSCPVIEGEKWSAPKWIRIRS 264
>Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-like protein
Length = 319
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 131/222 (59%), Gaps = 15/222 (6%)
Query: 93 PEPSLIPYQI--LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALR-KGETEESTK 149
P P + P+ +SW+PR + F + + ++V A+ L S +A G++E S
Sbjct: 49 PAPVVYPHHSRQISWKPRVFLYQHFLSDDEANHLVSLARTELKRSAVADNLSGKSELSDA 108
Query: 150 GIRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFD 209
RTSSGTF+ +DP +A +E+KIA T +P+ +GE +LRY+ G++Y HYD F
Sbjct: 109 --RTSSGTFIRKSQDPI--VAGIEEKIAAWTFLPKENGEDIQVLRYKHGEKYERHYDYFS 164
Query: 210 PAQYGPQKSQRVASFLLYLTDVEEGGETMFPY-----ENGENMDIGYDYEKCI--GLKVK 262
+ R+A+ L+YLTDV EGGET+FP E+G N + +C G+ VK
Sbjct: 165 DNVNTLRGGHRIATVLMYLTDVAEGGETVFPLAEEFTESGTNNE-DSTLSECAKKGVAVK 223
Query: 263 PRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIR 304
PRKGD LLF++L + + D SLH CPVIKGEKW ATKWIR
Sbjct: 224 PRKGDALLFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIR 265
>Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 267
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 5/211 (2%)
Query: 97 LIPYQILSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLA-LRKGETEESTKGIRTSS 155
L+ +++SW PR + F F +S++C+ + A+ RL ST+ + G+ +S +RTSS
Sbjct: 58 LVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSN--VRTSS 115
Query: 156 GTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGP 215
G F+SS+E + +EK+I+ + IP +GE +LRYE Q Y H+D F
Sbjct: 116 GMFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIK 175
Query: 216 QKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGYDYEKCIGLKVKPRKGDGLLFYSLM 275
+ QRVA+ L+YLTD EGGET FP G K GL VKP KGD +LF+S+
Sbjct: 176 RGGQRVATMLMYLTDGVEGGETHFPQAGDGECSCGGKMVK--GLCVKPNKGDAVLFWSMG 233
Query: 276 VNGTIDPTSLHGSCPVIKGEKWVATKWIRDK 306
++G D S+HG CPV++GEKW ATKW+R K
Sbjct: 234 LDGETDSNSIHGGCPVLEGEKWSATKWMRQK 264
>Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 308
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 124/209 (59%), Gaps = 8/209 (3%)
Query: 103 LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKG-IRTSSGTFLSS 161
LSW+PRA F T +CE+++ AK +L S +A E+ +S +RTSSG FL
Sbjct: 48 LSWRPRAFLHKGFLTDAECEHLISLAKDKLEKSMVA--DNESGKSVMSEVRTSSGMFLEK 105
Query: 162 DEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKSQRV 221
+D +A +E++IA T +P +GE IL Y+ G++Y HYD F R+
Sbjct: 106 KQDEV--VARIEERIAAWTFLPPDNGESIQILHYQNGEKYEPHYDYFHDKNNQALGGHRI 163
Query: 222 ASFLLYLTDVEEGGETMFPYENGENMDIGYD-YEKCI--GLKVKPRKGDGLLFYSLMVNG 278
A+ L+YL+DV +GGET+FP G+ + D + C G VKP KGD LLF+SL +
Sbjct: 164 ATVLMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCAKNGYAVKPVKGDALLFFSLHPDA 223
Query: 279 TIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
T D SLHGSCPVI+G+KW ATKWI +S
Sbjct: 224 TTDSDSLHGSCPVIEGQKWSATKWIHVRS 252
>Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 241
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 98/160 (61%), Gaps = 5/160 (3%)
Query: 151 IRTSSGTFLSSDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDP 210
+RTSSG FL +D +A +E++IA T +P +GE IL Y+ G++Y HYD F
Sbjct: 15 VRTSSGMFLEKKQDEV--VARIEERIAAWTFLPPDNGESIQILHYQNGEKYEPHYDYFHD 72
Query: 211 AQYGPQKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGYD-YEKCI--GLKVKPRKGD 267
R+A+ L+YL+DV +GGET+FP G+ + D + C G VKP KGD
Sbjct: 73 KNNQALGGHRIATVLMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCAKNGYAVKPVKGD 132
Query: 268 GLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
LLF+SL + T D SLHGSCPVI+G+KW ATKWI +S
Sbjct: 133 ALLFFSLHPDATTDSDSLHGSCPVIEGQKWSATKWIHVRS 172
>Os03g0166100
Length = 277
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 103 LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGIRTSSGTFLSSD 162
+SW+PRA + F + +C++++ AKQ M + + E T +RTSSG FL
Sbjct: 45 VSWRPRAFLYEGFLSDAECDHLISLAKQGKMEKSTVVDGESGESVTSKVRTSSGMFLDKK 104
Query: 163 EDPTGTLAEVEKKIAKATMIP-----------------RHHGEPFNILRYEIGQRYASHY 205
+D +A +E++IA TM+P +GE ILRY G++Y H+
Sbjct: 105 QDEV--VARIEERIAAWTMLPTECIIFYCFANFAILKLSENGESMQILRYGQGEKYEPHF 162
Query: 206 DAFDPAQYGPQKSQRVASFLLYLTDVEEGGETMFPYENGENMDIGYDYEKCIGLKVKPRK 265
D Q ++ RVA+ L+YL++V+ G + + D + G VKP K
Sbjct: 163 DYISGRQGSTREGDRVATVLMYLSNVKMGDSLLPQARLSQPKDETWSDCAEQGFAVKPAK 222
Query: 266 GDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWV 298
G +LF+SL N T+D SLHGSCPVI+GEK V
Sbjct: 223 GSAVLFFSLHPNATLDTDSLHGSCPVIEGEKVV 255
>Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 303
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 103 LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGIRTSSGTFLSSD 162
LSW PR + F + +C+++V + M S+LA G+ S I
Sbjct: 63 LSWHPRIFLYEGFLSDMECDHLVSMGRGN-MESSLAFTDGDRNSSYNNI----------- 110
Query: 163 EDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKSQRVA 222
ED ++++E +I+ + +P+ +GE +L+Y + + + + R+A
Sbjct: 111 EDIV--VSKIEDRISLWSFLPKENGESIQVLKYGVNRS-----GSIKEEPKSSSGAHRLA 163
Query: 223 SFLLYLTDVEEGGETMFPYENGENMDIGYDY-EKCIGLKVKPRKGDGLLFYSLMVNGTID 281
+ L+YL+DV++GGET+FP ++ +C G V+P KG+ +L ++L +G D
Sbjct: 164 TILMYLSDVKQGGETVFPRSEMKDAQAKEGAPSQCSGYAVRPAKGNAILLFNLRPDGETD 223
Query: 282 PTSLHGSCPVIKGEKWVATKWIR 304
S + CPV++GEKW+A K I
Sbjct: 224 KDSQYEECPVLEGEKWLAIKHIN 246
>Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 135
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 258 GLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
G VKP KG +LF+SL N T DP SLHGSCPVI+GEKW ATKWI +S
Sbjct: 32 GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVRS 81
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,373,363
Number of extensions: 451757
Number of successful extensions: 1130
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1104
Number of HSP's successfully gapped: 11
Length of query: 310
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 209
Effective length of database: 11,762,187
Effective search space: 2458297083
Effective search space used: 2458297083
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)