BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0702700 Os03g0702700|AK103495
(206 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0702700 Protein of unknown function DUF250 domain cont... 359 e-100
Os05g0494500 Protein of unknown function DUF250 domain cont... 181 2e-46
Os08g0135100 Similar to Phosphate/phosphoenolpyruvate trans... 175 2e-44
Os11g0139400 Protein of unknown function DUF250 domain cont... 175 2e-44
Os01g0802850 Protein of unknown function DUF250 domain cont... 174 3e-44
Os12g0136100 Protein of unknown function DUF250 domain cont... 174 3e-44
Os03g0622700 132 2e-31
Os10g0486200 87 8e-18
Os04g0692000 Protein of unknown function DUF6, transmembran... 74 8e-14
Os08g0104900 Protein of unknown function DUF6, transmembran... 73 1e-13
Os03g0286300 Similar to Phosphate/phosphoenolpyruvate trans... 72 2e-13
>Os03g0702700 Protein of unknown function DUF250 domain containing protein
Length = 206
Score = 359 bits (922), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/206 (87%), Positives = 181/206 (87%)
Query: 1 MMISRQXXXXXXXXXXXXXXSSGVILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFL 60
MMISRQ SSGVILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFL
Sbjct: 1 MMISRQLVLTYLYLLIYVCLSSGVILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFL 60
Query: 61 VRVFKVVAPVKMTFQIYATCVIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFI 120
VRVFKVVAPVKMTFQIYATCVIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFI
Sbjct: 61 VRVFKVVAPVKMTFQIYATCVIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFI 120
Query: 121 MAVLCGTDKLRWDLFLNMXXXXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVL 180
MAVLCGTDKLRWDLFLNM YGEIHFNIIGTLYQVTGIFAEALRLVLTQVL
Sbjct: 121 MAVLCGTDKLRWDLFLNMVLVSVGVVVSSYGEIHFNIIGTLYQVTGIFAEALRLVLTQVL 180
Query: 181 LQKKGLTLNPITSLYYIAPCRYCNYI 206
LQKKGLTLNPITSLYYIAPCRYCNYI
Sbjct: 181 LQKKGLTLNPITSLYYIAPCRYCNYI 206
>Os05g0494500 Protein of unknown function DUF250 domain containing protein
Length = 354
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
Query: 21 SSGVILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVVAPVK---MTFQIY 77
S VI++NK++L PK + +PFPI+LTM+HMAF + LVR+ +VV P MT Q+Y
Sbjct: 32 SFAVIVYNKYILDPKMYNWPFPISLTMVHMAFCSSLAVALVRLLRVVEPPSSPAMTPQLY 91
Query: 78 ATCVIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLN 137
+ V+PI A +A SLWF N+AY+Y+SV+FIQMLKALMPVA + + VL + R LN
Sbjct: 92 TSSVVPIGALYAMSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKETFRSSSMLN 151
Query: 138 MXXXXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYI 197
M YGE F++ G Q+ + EA RLVL Q+LL KG++LNPITSLYY+
Sbjct: 152 MLSISFGVAIAAYGEARFDVRGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYV 211
Query: 198 APC 200
APC
Sbjct: 212 APC 214
>Os08g0135100 Similar to Phosphate/phosphoenolpyruvate translocator protein-like
Length = 350
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Query: 21 SSGVILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVVA-PVKMTFQIYAT 79
S G I FNKWVLS K FP+P+ LT++HM FS VV F + ++FK+V MT IY +
Sbjct: 33 SGGQIFFNKWVLSSKEINFPYPVALTLLHMVFSSVVCFAITKIFKIVKIEEGMTTDIYIS 92
Query: 80 CVIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMX 139
VIPI A FA +LW GN+AYLYISVAF QMLKA+MPVA F++ G +++ + M
Sbjct: 93 SVIPIGAMFAMTLWLGNSAYLYISVAFAQMLKAIMPVAVFLLGAAFGLEEMSCKMLAIMS 152
Query: 140 XXXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAP 199
GEI + +G +YQ+ G+ AEALRL+ ++ L+KKG+ LN I+ +YY++P
Sbjct: 153 VISVGVIVASVGEITISWVGVVYQMGGVVAEALRLIFIEIFLKKKGVRLNLISMMYYVSP 212
Query: 200 C 200
C
Sbjct: 213 C 213
>Os11g0139400 Protein of unknown function DUF250 domain containing protein
Length = 388
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVV---APVKMTFQIYATC 80
VI++NK++L PK + +PFPI+LTMIHMAF + LVRV +VV A MT +YA
Sbjct: 65 VIVYNKYILDPKMYNWPFPISLTMIHMAFCASLAVVLVRVLRVVAVPASPPMTPSLYAAS 124
Query: 81 VIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXX 140
V+PI A +A SLWF N+AY+Y+SV+FIQMLKALMPVA + +AV TD R LNM
Sbjct: 125 VVPIGALYALSLWFSNSAYIYLSVSFIQMLKALMPVAVYSLAVAFRTDSFRRASMLNMLG 184
Query: 141 XXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPC 200
YGE F+ G + Q+ + AEA RLVL Q+LL KG++LNPITSLYYIAPC
Sbjct: 185 ISAGVAVAAYGEARFDAFGVMLQLAAVAAEATRLVLIQILLTSKGMSLNPITSLYYIAPC 244
>Os01g0802850 Protein of unknown function DUF250 domain containing protein
Length = 361
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVV---APVKMTFQIYATC 80
VI++NK++L PK + +PFPI+LTM+HMAF + LVR+ +VV + MT Q+Y +
Sbjct: 42 VIVYNKYILDPKMYNWPFPISLTMVHMAFCSSLAIALVRLLRVVELPSSPAMTPQLYTSS 101
Query: 81 VIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXX 140
V+PI A ++ SLWF N+AY+Y+SV+FIQMLKALMPVA + + VL + + LNM
Sbjct: 102 VLPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKENFKSSAMLNMLS 161
Query: 141 XXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPC 200
YGE F+ G Q+ + EA RLVL Q+LL KG++LNPITSLYY+APC
Sbjct: 162 ISFGVAIAAYGEARFDARGVALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPC 221
>Os12g0136100 Protein of unknown function DUF250 domain containing protein
Length = 474
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVV---APVKMTFQIYATC 80
VI++NK++L PK + +PFPI+LTMIHMAF + LVRV +VV A MT +YA
Sbjct: 105 VIVYNKYILDPKMYNWPFPISLTMIHMAFCASLAVVLVRVLRVVAVPASPPMTPSLYAAS 164
Query: 81 VIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXX 140
V+PI A +A SLWF N+AY+Y+SV+FIQMLKALMPVA + +AV TD R LNM
Sbjct: 165 VVPIGALYALSLWFSNSAYIYLSVSFIQMLKALMPVAVYSLAVAFRTDSFRRASMLNMLG 224
Query: 141 XXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPC 200
YGE F+ G + Q+ + AEA RLVL Q+LL KG++LNPITSLYYIAPC
Sbjct: 225 ISAGVAVAAYGEARFDAFGVMLQLAAVAAEATRLVLIQILLTSKGMSLNPITSLYYIAPC 284
>Os03g0622700
Length = 369
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVVA-PVK--MTFQIYATC 80
VI++NK++L+P + +PFP++LTM+H AF +T L+RV +VVA P MT +YA
Sbjct: 171 VIMYNKYILNPTMYNWPFPVSLTMVHTAFCASLTVVLIRVLRVVAEPTSPPMTPSLYAVS 230
Query: 81 VIPISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXX 140
V+PI +A SLWF N+AY+Y+SV+FIQMLKALMPV + +AV TD R LNM
Sbjct: 231 VVPIGVLYALSLWFSNSAYIYLSVSFIQMLKALMPVTVYCLAVAFRTDSFRHASMLNMLG 290
Query: 141 XXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLL 181
YGE F+ G + Q+ I A+A RLVL Q+LL
Sbjct: 291 ISAGIAVAAYGEARFDAFGVILQLVAITAKATRLVLIQILL 331
>Os10g0486200
Length = 337
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAF-SGVVTFFLVRVFKVVAPVK--MTFQIYATC 80
VI++NK++L P + +PFPI+LTM+HM F + + + + V P MT +YA
Sbjct: 117 VIMYNKYILDPTMYNWPFPISLTMVHMVFCASLAVVLVRVLRVVAEPTSPPMTPSLYAAS 176
Query: 81 VIPIS-AFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMX 139
V+PI A A +L MLKALMPV + +A+ TD LNM
Sbjct: 177 VVPIGRALRAVAL----------------MLKALMPVVVYCLAIAFRTDSFHHASMLNML 220
Query: 140 XXXXXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLL 181
YGE F+ G + Q+ + AEA RLVL Q+LL
Sbjct: 221 GISAGIAVAAYGEARFDAFGVMLQLVAVTAEATRLVLIQILL 262
>Os04g0692000 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 350
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVVAPVKMTFQIYATCVIP 83
VI+ NKW+ + F FP+T++ +H S + + + V K +++ + + P
Sbjct: 32 VIIINKWIF--QKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKPLIQVEPEDRWRRIFP 89
Query: 84 ISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXXXXX 143
+S F ++ GN + YI V+F+Q +K+ P T I+ L + W ++ ++
Sbjct: 90 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEWRIWASLVPIVG 149
Query: 144 XXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAP 199
E+ FN+ G + G A + + +L + LL G + I ++YY+AP
Sbjct: 150 GILLTSITELSFNMFGFCAAMVGCLATSTKTILAESLLH--GYKFDSINTVYYMAP 203
>Os08g0104900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 337
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 24 VILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVVAPVKMTFQIYATCVIP 83
VI+ NKW+ + +F FP+T++ +H S + + +++ K+ +++ + + P
Sbjct: 28 VIIMNKWIF--QKLEFKFPLTVSCVHFICSSIGAYIAIKILKMKPLIEVAPEDRWRRIFP 85
Query: 84 ISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXXXXX 143
+S F ++ GN + YI V+F+Q +K+ P T I+ L W ++ ++
Sbjct: 86 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFEWRIWASLVPIVG 145
Query: 144 XXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAP 199
E+ FN+ G + G A + + +L + LL G + I ++YY+AP
Sbjct: 146 GIMLTSITELSFNMFGFCAAMVGCLATSTKTILAESLLH--GYKFDSINTVYYMAP 199
>Os03g0286300 Similar to Phosphate/phosphoenolpyruvate translocator protein-like
Length = 322
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 23 GVILFNKWVLSPKYFKFPFPITLTMIHMAFSGVVTFFLVRVFKVVAPVKMTFQIYATCVI 82
GV+L NK++LS + F +PI LTM HM+ ++++ + +VV + ++ +
Sbjct: 37 GVLLLNKYLLS--NYGFKYPIFLTMCHMSACALLSYAAIAWLRVVPMQLVRSRVQLAKIA 94
Query: 83 PISAFFASSLWFGNTAYLYISVAFIQMLKALMPVATFIMAVLCGTDKLRWDLFLNMXXXX 142
+S F S+ GN + Y+ V+F Q + A P T + A + + W +L +
Sbjct: 95 ALSLVFCGSVVSGNVSLRYLPVSFNQAVGATTPFFTAVFAYIMTVKRESWVTYLTLVPVV 154
Query: 143 XXXXXXXYGEIHFNIIGTLYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAP 199
GE F++ G + + A AL+ VL +LL +G LN + L Y+AP
Sbjct: 155 TGVMIASGGEPSFHLFGFIMCIGATAARALKTVLQGILLSSEGEKLNSMNLLLYMAP 211
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.334 0.144 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,007,756
Number of extensions: 157148
Number of successful extensions: 460
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 448
Number of HSP's successfully gapped: 12
Length of query: 206
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 110
Effective length of database: 12,023,257
Effective search space: 1322558270
Effective search space used: 1322558270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 153 (63.5 bits)