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Os03g0702700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF250 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.47 (0.0131) R2 : 0.0164
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0758 (0.0275) R2dN8 : 0.0212 R2N8 : 0.0164
σ : 0.246
deviance : 27.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.49 0.191 9.45 -0.0199 0.327 0.301 -0.147 -0.0396 -0.0231 4.49 29.82 1177 -- --
16.49 0.189 9.45 -0.0137 0.328 0.296 -0.148 -- -0.0234 4.49 29.83 1177 -- --
16.55 0.189 9.45 -0.0258 0.327 0.304 -- -0.0861 -0.0222 4.53 29.89 1176 -- --
16.55 0.189 9.45 -0.0122 0.327 0.295 -- -- -0.0209 4.53 29.89 1176 -- --
22.14 0.219 9.45 0.0253 -- 0.303 -- 0.234 -0.0109 -- 29.6 1220 -- --
20.62 0.213 9.46 0.0637 0.358 -- -0.0849 -- -0.077 4.13 -- -- -- --
20.64 0.213 9.46 0.0646 0.357 -- -- -- -0.0766 4.14 -- -- -- --
22.14 0.219 9.45 -0.011 -- 0.333 -- -- -0.00596 -- 29.65 1215 -- --
16.56 0.19 9.45 -- 0.326 0.293 -- -- -0.021 4.53 29.9 1176 -- --
27.56 0.245 9.47 0.079 -- -- -- -- -0.0671 -- -- -- -- --
20.75 0.213 9.47 -- 0.359 -- -- -- -0.0838 4.13 -- -- -- --
22.14 0.219 9.45 -- -- 0.33 -- -- -0.00801 -- 29.6 1220 -- --
27.73 0.246 9.47 -- -- -- -- -- -0.0758 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.94 temperature 30 14400 > th dose dependent rect. 17 1
2 15.97 humidity 70 14400 < th dose dependent rect. 18 2
29 16.03 humidity 70 14400 < th dose independent rect. 19 2
39 16.04 temperature 30 14400 > th dose independent rect. 17 2
54 16.05 temperature 30 14400 < th dose independent rect. 17 2
65 16.05 temperature 30 14400 < th dose independent rect. 17 15
87 16.14 humidity 70 14400 > th dose independent rect. 19 8
90 16.15 humidity 70 14400 > th dose independent rect. 19 3
91 16.15 humidity 70 14400 > th dose independent rect. 19 6
114 16.23 temperature 30 720 < th dose independent rect. 17 9
174 16.31 temperature 30 14400 > th dose dependent sin 12 NA
181 16.35 humidity 60 14400 < th dose independent rect. 17 15
195 16.36 humidity 60 14400 < th dose dependent rect. 16 4
208 16.36 humidity 50 14400 < th dose dependent rect. 16 18
209 16.37 humidity 50 14400 < th dose dependent rect. 16 1
231 16.39 radiation 20 14400 > th dose dependent rect. 16 15
289 16.48 radiation 30 14400 > th dose independent rect. 7 1
310 16.50 radiation 10 14400 > th dose dependent rect. 17 13
311 16.51 temperature 30 1440 > th dose independent rect. 16 3
314 16.51 temperature 30 1440 < th dose independent rect. 16 5
319 16.51 humidity 70 720 > th dose independent rect. 17 8
335 16.51 radiation 10 14400 > th dose dependent rect. 17 1
347 16.51 radiation 1 1440 > th dose dependent rect. 17 13
350 16.52 temperature 30 1440 < th dose independent rect. 16 3
357 16.52 wind 5 43200 > th dose independent rect. 19 19
373 16.53 temperature 30 14400 > th dose independent sin 12 NA
374 16.53 temperature 30 14400 < th dose independent sin 12 NA
375 16.53 humidity 70 720 > th dose independent sin 12 NA
377 16.53 wind 5 43200 < th dose independent rect. 20 18
380 16.54 wind 5 43200 > th dose independent sin 5 NA
381 16.54 humidity 60 14400 > th dose independent rect. 17 10
383 16.54 humidity 50 14400 > th dose independent rect. 17 16
392 16.55 wind 5 43200 < th dose independent sin 5 NA
394 16.55 humidity 60 14400 > th dose independent rect. 17 8
418 16.56 humidity 60 14400 > th dose independent rect. 17 3
429 16.56 radiation 30 14400 < th dose independent rect. 15 17
465 16.57 humidity 50 14400 < th dose independent rect. 17 17
474 16.58 humidity 70 720 < th dose independent sin 12 NA
481 16.58 radiation 10 1440 > th dose dependent rect. 16 15
484 16.59 wind 5 43200 < th dose independent rect. 3 11
486 16.59 radiation 20 14400 < th dose independent rect. 16 15
490 16.59 radiation 30 14400 > th dose dependent rect. 15 17
493 16.60 humidity 70 720 < th dose independent rect. 16 4
506 16.60 wind 5 43200 > th dose independent rect. 3 11
523 16.60 temperature 30 14400 < th dose independent rect. 16 20
542 16.61 wind 5 43200 < th dose independent rect. 10 1
546 16.61 wind 5 43200 > th dose independent rect. 6 6
547 16.61 wind 5 43200 < th dose independent rect. 6 6
561 16.61 radiation 40 1440 > th dose independent rect. 14 19
570 16.62 wind 5 43200 < th dose independent rect. 4 8
576 16.62 radiation 30 1440 < th dose independent rect. 15 17
580 16.62 temperature 30 14400 > th dose independent rect. 16 20
583 16.62 temperature 30 1440 > th dose dependent rect. 12 7
600 16.63 wind 5 43200 > th dose independent rect. 9 2
678 16.64 radiation 30 1440 > th dose independent rect. 15 17
683 16.64 temperature 30 1440 > th dose dependent sin 16 NA
685 16.64 temperature 30 1440 > th dose dependent rect. 13 1
686 16.64 temperature 25 14400 > th dose dependent rect. 22 1
708 16.64 wind 3 43200 > th dose dependent rect. 20 17
735 16.65 radiation 10 1440 > th dose independent rect. 16 14
747 16.65 temperature 30 14400 > th dose dependent no NA NA
748 16.65 wind 5 43200 > th dose dependent rect. 20 3
761 16.65 radiation 20 1440 < th dose dependent rect. 17 13
865 16.66 radiation 40 1440 > th dose independent rect. 14 1
867 16.66 radiation 10 1440 > th dose independent rect. 16 2
956 16.67 temperature 30 14400 < th dose independent rect. 11 1
965 16.67 radiation 10 14400 > th dose independent rect. 17 13
971 16.67 wind 3 43200 > th dose dependent sin 7 NA
973 16.67 wind 7 43200 < th dose dependent rect. 3 1
985 16.68 wind 5 43200 > th dose independent rect. 20 3
1000 16.68 radiation 10 1440 < th dose independent rect. 16 11