Os03g0286300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphate/phosphoenolpyruvate translocator protein-like.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0286300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Phosphate/phosphoenolpyruvate translocator protein-like.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.73 | 0.357 | 11.9 | 0.17 | 0.538 | -1.04 | -0.811 | 0.226 | 0.0972 | 13.9 | 21.2 | 14 | -- | -- |
| 57.77 | 0.354 | 11.9 | 0.133 | 0.533 | -1.03 | -0.759 | -- | 0.0878 | 13.9 | 21.15 | 13 | -- | -- |
| 59.45 | 0.362 | 11.9 | -0.0452 | 0.536 | -1 | -- | -0.925 | 0.0405 | 14 | 20.47 | 12 | -- | -- |
| 59.87 | 0.36 | 11.9 | 0.118 | 0.555 | -1.07 | -- | -- | 0.089 | 14.1 | 21.28 | 14 | -- | -- |
| 70.66 | 0.394 | 11.9 | -0.208 | -- | -0.481 | -- | -1.19 | -0.0659 | -- | 20.3 | 28 | -- | -- |
| 73.71 | 0.402 | 11.9 | -0.0718 | 0.157 | -- | -0.955 | -- | -0.0867 | 13.1 | -- | -- | -- | -- |
| 77.5 | 0.412 | 11.9 | -0.106 | 0.158 | -- | -- | -- | -0.092 | 12.8 | -- | -- | -- | -- |
| 71.73 | 0.394 | 11.9 | -0.00415 | -- | -0.543 | -- | -- | -0.00823 | -- | 21.27 | 63 | -- | -- |
| 60.2 | 0.361 | 11.9 | -- | 0.538 | -1.03 | -- | -- | 0.0705 | 14.1 | 21.47 | 13 | -- | -- |
| 79.07 | 0.416 | 11.9 | -0.112 | -- | -- | -- | -- | -0.0949 | -- | -- | -- | -- | -- |
| 77.8 | 0.413 | 11.9 | -- | 0.16 | -- | -- | -- | -0.0802 | 12.8 | -- | -- | -- | -- |
| 67.89 | 0.384 | 11.9 | -- | -- | -0.579 | -- | -- | 0.0317 | -- | 19.7 | 1500 | -- | -- |
| 79.4 | 0.416 | 11.9 | -- | -- | -- | -- | -- | -0.0825 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 12 | 56.05 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 14 | 56.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 32 | 56.83 | temperature | 20 | 90 | > th | dose dependent | sin | 3 | NA |
| 35 | 56.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 61 | 57.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 62 | 57.19 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 89 | 57.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 97 | 57.53 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 107 | 57.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 109 | 57.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 121 | 57.74 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 21 |
| 163 | 57.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 216 | 58.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 220 | 58.29 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 253 | 58.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 257 | 58.45 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 316 | 58.74 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 23 |
| 336 | 58.82 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 357 | 58.90 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |
| 375 | 58.97 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 386 | 59.00 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 22 |
| 387 | 59.00 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 428 | 59.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 432 | 59.11 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 16 |
| 446 | 59.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 478 | 59.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 486 | 59.23 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 500 | 59.28 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 10 |
| 529 | 59.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 546 | 59.37 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 576 | 59.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 577 | 59.43 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 23 |
| 584 | 59.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 606 | 59.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 642 | 59.59 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 14 |
| 649 | 59.60 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 23 |
| 650 | 59.60 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 23 |
| 656 | 59.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 660 | 59.62 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 666 | 59.62 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 691 | 59.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 704 | 59.68 | temperature | 25 | 90 | > th | dose independent | no | NA | NA |
| 719 | 59.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 741 | 59.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 753 | 59.77 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 13 |
| 768 | 59.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 778 | 59.81 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |
| 780 | 59.81 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 800 | 59.84 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 813 | 59.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 835 | 59.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 879 | 59.96 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 23 |
| 891 | 59.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 917 | 60.01 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 23 |
| 929 | 60.03 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 932 | 60.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 939 | 60.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 946 | 60.06 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 23 |
| 956 | 60.06 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 963 | 60.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 977 | 60.09 | temperature | 25 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 993 | 60.11 | temperature | 25 | 1440 | < th | dose independent | rect. | 1 | 21 |