BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0698800 Os03g0698800|AK120638
         (764 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0698800  Zinc finger, CCCH-type domain containing protein   1146   0.0  
Os12g0515500  Similar to Zn-finger transcription factor           412   e-115
Os07g0568300  Similar to ZF protein (Fragment)                    382   e-106
Os05g0128200  Similar to Transposable element Mu1 sequence        240   4e-63
Os01g0192000  Similar to Zinc finger transcription factor         202   7e-52
Os05g0195200  Zinc finger, CCCH-type domain containing protein    199   6e-51
Os05g0525900  Similar to Zing finger transcription factor PEI1    154   2e-37
Os01g0738400  Similar to Zn-finger transcription factor           145   9e-35
Os07g0668600  Conserved hypothetical protein                      125   8e-29
>Os03g0698800 Zinc finger, CCCH-type domain containing protein
          Length = 764

 Score = 1146 bits (2964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/764 (76%), Positives = 586/764 (76%)

Query: 1   MFLLMASVLPIRQAPMNGTPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLT 60
           MFLLMASVLPIRQAPMNGTPI                                    TLT
Sbjct: 1   MFLLMASVLPIRQAPMNGTPISASAAAGVDGVGAAVALAAATKKSAAAAAAVAEMAKTLT 60

Query: 61  VDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYGRRKVLEHRTPLMVAATYG 120
           VDT                                    WYGRRKVLEHRTPLMVAATYG
Sbjct: 61  VDTDDAFAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGRRKVLEHRTPLMVAATYG 120

Query: 121 XXXXXXXXXXXXXXXXNRRCGSDGTTALHCAASGGSPSCVEAVKXXXXXXXXXXXXXXSG 180
                           NRRCGSDGTTALHCAASGGSPSCVEAVK              SG
Sbjct: 121 SLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASG 180

Query: 181 YRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPS 240
           YRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPS
Sbjct: 181 YRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPS 240

Query: 241 AAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDW 300
           AAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDW
Sbjct: 241 AAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDW 300

Query: 301 TECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTR 360
           TECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTR
Sbjct: 301 TECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTR 360

Query: 361 LCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRXXXXXXXXXXXXXGLMPGSPSSV 420
           LCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPR             GLMPGSPSSV
Sbjct: 361 LCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATATMEMAAAMGLMPGSPSSV 420

Query: 421 SAVMSPFTXXXXXXXXXXXXXLGWQQPNVPTLHLPGXXXXXXXXXXXXXXXDMPADDYSL 480
           SAVMSPFT             LGWQQPNVPTLHLPG               DMPADDYSL
Sbjct: 421 SAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARDMPADDYSL 480

Query: 481 MQDIDSQLINDLCYSRIGSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFS 540
           MQDIDSQLINDLCYSRIGSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFS
Sbjct: 481 MQDIDSQLINDLCYSRIGSSTGNHTSRTKSLNPSNLDDLFSAEMVSSPRYSNADQGGMFS 540

Query: 541 PSHKXXXXXXXXXXXXXXXSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCV 600
           PSHK               SPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCV
Sbjct: 541 PSHKAAFLNQFQQQQQALLSPINTVFSPKSVDNQQLPSHSSLLQASLGISSPGRMSPRCV 600

Query: 601 ESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARAXXXXXXXXXXXXXXXXXXXXT 660
           ESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARA                    T
Sbjct: 601 ESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGT 660

Query: 661 PDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPL 720
           PDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPL
Sbjct: 661 PDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPL 720

Query: 721 MPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT 764
           MPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT
Sbjct: 721 MPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQMQLDQHIGSLAT 764
>Os12g0515500 Similar to Zn-finger transcription factor
          Length = 619

 Score =  412 bits (1059), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 291/680 (42%), Positives = 344/680 (50%), Gaps = 125/680 (18%)

Query: 100 WYGRRKVLEHRTPLMVAATYGXXX-XXXXXXXXXXXXXNRRCGSDGTTALHCAASGGSPS 158
           WY   +  E  TPLMVAA YG                 NR   S  +T LH AA+GGS S
Sbjct: 44  WYTPARGAEPLTPLMVAAVYGSVGCLDALLSPPYLVDPNRASASSLSTPLHLAAAGGSAS 103

Query: 159 CVEAVKXXXXXXXXXXXXXXSGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVT 218
              AV                  R +D++++PP     K  L  LLG             
Sbjct: 104 APAAVSRLLAAGADPALLDHLQRRASDLVALPPNSLPLKNHLLSLLGA------------ 151

Query: 219 RAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYA 278
                                                    +KE+P DPSLPDIKN  YA
Sbjct: 152 -----------------------------------------RKEWPPDPSLPDIKNGAYA 170

Query: 279 SDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGV-CRR 337
           SD+FRMYSFK+R CSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCP+F+KG  CRR
Sbjct: 171 SDDFRMYSFKVRACSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFKKGAGCRR 230

Query: 338 GDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPR 397
           GDMCEYAHGVFE WLHPAQYRTRLCKDG  C RRVCFFAHT DELRPLYVSTGSAVPSPR
Sbjct: 231 GDMCEYAHGVFESWLHPAQYRTRLCKDGVGCARRVCFFAHTPDELRPLYVSTGSAVPSPR 290

Query: 398 XXXXXXXXXXXXXGLM--PGSPSSVSAVMSPFTXXXXXXXXXXXXXLGW-QQPNVPTLHL 454
                          +  PGS SS +  +SP                 W QQP+VP L L
Sbjct: 291 GALEMAAAAAAMGMGLSSPGS-SSFTPPLSPSAGGGGGGGGGSGGGGAWPQQPSVPALCL 349

Query: 455 PGXXXX--XXXXXXXXXXXDMPADDYSLMQDIDSQLINDLCYSRIGSSTGNHTSRTKSLN 512
           PG                 DM  D+  L+    +    D     + S     ++R K+L 
Sbjct: 350 PGSAGNLHLSRLRTSLSARDMAVDE--LLAAAAAAADYD---GLVASPASIRSARGKALV 404

Query: 513 PSNLDDLFSAEMVS-----SPRYSNADQGG-MFSPSHKXXXXXXXXXXXXXXXSPINTVF 566
           PSNLD+LFSAE+ +     SPRY  ADQGG  FSP+ K                      
Sbjct: 405 PSNLDELFSAELAAAAASRSPRY--ADQGGAAFSPTRKA--------------------- 441

Query: 567 SPKSVDNQ-QLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREK-QQQTM 624
              +V NQ QL    SLL       +P        E  SPM+S L AALAQREK QQQT+
Sbjct: 442 ---TVLNQFQLQQQHSLLSPRAAAVTP--------EPVSPMSSRLLAALAQREKMQQQTL 490

Query: 625 RSLSSRDLGPSAARAXXXXXXXXXXXXXXXXXXXXTPDWGVNGEELGKLRRSSSFELRSG 684
           RS+SSRDLG +A+                       PDWG + EELG+L+R SSFELRSG
Sbjct: 491 RSMSSRDLGNAAS---LLVGSPVSSSMSKWGFPSGNPDWGADDEELGRLKRCSSFELRSG 547

Query: 685 G----DDPDLSWVHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGH 740
                 +PDLSWV+TLVKE  PEK +TT  +++S+G           G+  S +  + G 
Sbjct: 548 AANGNHEPDLSWVNTLVKEPTPEKMMTTTSAMDSIG---------ILGQNTSRDHIVGGE 598

Query: 741 DQ-AAVIGALLEQMQLDQHI 759
           D  A VI + LEQ+QLD+ +
Sbjct: 599 DDTAGVISSWLEQLQLDEMV 618
>Os07g0568300 Similar to ZF protein (Fragment)
          Length = 657

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 258/665 (38%), Positives = 336/665 (50%), Gaps = 75/665 (11%)

Query: 100 WYGRRKVLEHRTPLMVAATYGXXXXXXXXXXXXX-XXXNRRCGSDGTTALHCAASGGSPS 158
           WYGR K  E RTPLMVAATYG                 NRR G+DG TALHCAASGGS +
Sbjct: 60  WYGRSKAYEARTPLMVAATYGSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRN 119

Query: 159 CVEAVKXXXXXXXXXXXXXXSGYRPADVISVPPKMFDAKIALQDLLGCPKAGHGVLRVVT 218
            V  VK              +G  PADVI  PP   DA   L+ LLG  +A    L V T
Sbjct: 120 AVAVVKLLLAAGADPATPDSAGRFPADVILAPPASPDALGDLEVLLGRRRA----LAVAT 175

Query: 219 RAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYA 278
             A+   SP  S + ++     ++   +     + R     KKEYPVDP+LPDIK+S+YA
Sbjct: 176 SVASGSSSPPLSSSPDEGNRSPSSRSSSLSPITVDR----GKKEYPVDPTLPDIKSSVYA 231

Query: 279 SDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRK-GVCRR 337
           SDEFRM++FK+RPCSRAYSHDWTECPFVHPGENARRRDPRK+ Y+ VPCP+FR+ G C  
Sbjct: 232 SDEFRMFAFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVPCPNFRRPGGCPS 291

Query: 338 GDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPR 397
           GD CE++HGVFE WLHP+QYRTRLCK+G +C RR+CFFAH  DELR +  ++G+ + SPR
Sbjct: 292 GDSCEFSHGVFESWLHPSQYRTRLCKEGAACARRICFFAHDEDELRHVPHNSGAGLLSPR 351

Query: 398 XXXXXXXXXXXXXGLMPGSPSSVSAVMSPFTXXXXXXXXXXXXXLGWQQPNVPTLHLPGX 457
                        GL+PGSP+      +P                 W Q           
Sbjct: 352 ASSSIDMTAAAALGLLPGSPTR---HFAPPPVSPSAGSNGGAAAAHWLQ----------- 397

Query: 458 XXXXXXXXXXXXXXDMPADDYSLMQDIDSQLINDLCY---SRIGSSTGNHTSRTKSLNPS 514
                         D   DD  ++ + +SQ +  LC    SR         S   ++ PS
Sbjct: 398 ---GSRLRSSFNARDAAVDDLGMLLEWESQYLGALCLPPSSRPQPRLSAGLSIRPTIAPS 454

Query: 515 NLDDLFSAEMVSSPRYSNADQGGMFSPSHKXXXXXXXXXXXXXXXSPINT--VFSPKSVD 572
           NL+D+++++M  SPR+ N     ++SP+HK               SP+NT  ++SP+++D
Sbjct: 455 NLEDMYASDMAMSPRFPNDQGHSVYSPAHK-SALLNKLHQQKGLLSPVNTNRMYSPRALD 513

Query: 573 NQQLPSHSSLLQASLGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDL 632
                  SSL  +  G  SP   SPR +E  SP+++ + A   QR        S +   +
Sbjct: 514 P------SSLAHSPFGGMSP--RSPRTMEPTSPLSARVGAPATQRPSVGSPRNSSAWGTV 565

Query: 633 GPSAARAXXXXXXXXXXXXXXXXXXXXTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSW 692
           G    +                       DWGV+ EEL +LRR +      G D+ D+SW
Sbjct: 566 GSPMGKV----------------------DWGVDSEELVRLRRPAQPGF--GEDETDVSW 601

Query: 693 VHTLVKESPPEKQVTTAESINSVGPSPLMPPSVSNGEGPSLNAPLDGHDQAAVIGALLEQ 752
           V +L         V+ AE     G    MP + +    P LN   D  DQ  VIGA LEQ
Sbjct: 602 VQSL---------VSNAELNGKRGEVQGMPGTSALMNRPDLNNQGDLLDQ-TVIGAWLEQ 651

Query: 753 MQLDQ 757
           M LDQ
Sbjct: 652 MHLDQ 656
>Os05g0128200 Similar to Transposable element Mu1 sequence
          Length = 380

 Score =  240 bits (612), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 104/139 (74%), Positives = 118/139 (84%), Gaps = 1/139 (0%)

Query: 260 KKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRK 319
           KKEYP D +LPD+K+ ++++DEFRMYSFK++PCSRAYSHDWTECPFVHPGENARRRDPR+
Sbjct: 191 KKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRR 250

Query: 320 YHYSCVPCPDFRK-GVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHT 378
           Y YSCVPCP+FRK G CR+GD CEYAHGVFECWLHPAQYRTRLCKD   C RR+CFFAH 
Sbjct: 251 YSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHK 310

Query: 379 TDELRPLYVSTGSAVPSPR 397
            DELR +  S  S V  PR
Sbjct: 311 PDELRAVNPSAVSVVRVPR 329
>Os01g0192000 Similar to Zinc finger transcription factor
          Length = 386

 Score =  202 bits (514), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 84/106 (79%), Positives = 91/106 (85%)

Query: 280 DEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGD 339
           DEFRMY FK+R C+R  SHDWTECPF HPGE ARRRDPRKYHYS   CPDFRKG C+RGD
Sbjct: 75  DEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGD 134

Query: 340 MCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 385
            CEYAHGVFECWLHPA+YRT+ CKDGT+C RRVCFFAHT D+LR L
Sbjct: 135 ACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVL 180
>Os05g0195200 Zinc finger, CCCH-type domain containing protein
          Length = 402

 Score =  199 bits (506), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 87/121 (71%), Positives = 96/121 (79%)

Query: 277 YASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCR 336
           YA DEFRMY FK+R C+R  SHDWTECPF HPGE ARRRDPR+Y YS   CPDFRKG C+
Sbjct: 73  YACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGGCK 132

Query: 337 RGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSP 396
           RGD CE+AHGVFECWLHPA+YRT+ CKDGT+C RRVCFFAHT D+LR L  S      SP
Sbjct: 133 RGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSNSP 192

Query: 397 R 397
           R
Sbjct: 193 R 193
>Os05g0525900 Similar to Zing finger transcription factor PEI1
          Length = 255

 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 3/105 (2%)

Query: 282 FRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRK---GVCRRG 338
           F MY FK+R C+RA SHDWT CP+ HPGE ARRRDPR+  Y+  PCPDFR+     C RG
Sbjct: 59  FMMYEFKVRRCARARSHDWTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGAACPRG 118

Query: 339 DMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELR 383
             C +AHG FE WLHP++YRTR C+ G +C RRVCFFAHT  ELR
Sbjct: 119 STCPFAHGTFELWLHPSRYRTRPCRAGVACRRRVCFFAHTAGELR 163
>Os01g0738400 Similar to Zn-finger transcription factor
          Length = 225

 Score =  145 bits (367), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 3/121 (2%)

Query: 280 DEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFR---KGVCR 336
           ++F MY FK+R C R+ +H+WT CP+ HPGE ARRRDP    Y+  PCPDFR   +  C 
Sbjct: 43  EDFMMYEFKVRRCPRSRAHEWTSCPYAHPGEAARRRDPSHVTYTGEPCPDFRVAARAACP 102

Query: 337 RGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSP 396
           RG  C +AHG FE WLHP++YRTR C+ G  C R VCFFAH   ELR +     +A PSP
Sbjct: 103 RGSGCPFAHGTFETWLHPSRYRTRPCRSGMLCARPVCFFAHNDKELRIVGDDAAAATPSP 162

Query: 397 R 397
           R
Sbjct: 163 R 163
>Os07g0668600 Conserved hypothetical protein
          Length = 280

 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 14/163 (8%)

Query: 245 MTTKFADLPRVVTSEKKEYPVDPS----LPDIKNSIYAS--DEFRMYSFKIRPCSRAYSH 298
           M   FA    ++  E++E  +DP+         + ++AS  ++F ++ +K++ C R+ SH
Sbjct: 6   MHDVFAQTTSIIGHEEEEVTIDPTKWGAWAHRGHRLWASMSEDFWIHVYKVQRCPRSSSH 65

Query: 299 DWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKG--------VCRRGDMCEYAHGVFEC 350
           DWT CP+ H GE ARRRD R++ Y+ V CPD+R           C  G  C YAHGVFE 
Sbjct: 66  DWTSCPYAHKGERARRRDTRRFAYAAVSCPDYRPREAAPGAVPSCAHGLRCRYAHGVFEL 125

Query: 351 WLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAV 393
           WLHP+++RTR+C  GT C RR+CFFAH+  ELR    S  SA+
Sbjct: 126 WLHPSRFRTRMCSAGTRCPRRICFFAHSAAELRDDPNSIASAI 168
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.131    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,480,670
Number of extensions: 894673
Number of successful extensions: 2500
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 2473
Number of HSP's successfully gapped: 10
Length of query: 764
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 655
Effective length of database: 11,344,475
Effective search space: 7430631125
Effective search space used: 7430631125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)