Os07g0568300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ZF protein (Fragment).
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Os07g0568300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ZF protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.99 | 0.262 | 11.3 | -0.172 | 0.953 | 1.05 | 0.135 | -0.0959 | 0.00903 | 7.52 | 28.7 | 89 | -- | -- |
| 31.01 | 0.259 | 11.3 | -0.176 | 0.95 | 1.05 | 0.128 | -- | 0.00603 | 7.51 | 28.6 | 89 | -- | -- |
| 31.04 | 0.26 | 11.3 | -0.169 | 0.956 | 1.05 | -- | -0.0962 | 0.0082 | 7.51 | 28.66 | 87 | -- | -- |
| 31.05 | 0.26 | 11.3 | -0.185 | 0.957 | 1.05 | -- | -- | 0.00573 | 7.51 | 28.6 | 84 | -- | -- |
| 60.69 | 0.363 | 11.3 | 0.0443 | -- | 1.77 | -- | -0.428 | 0.115 | -- | 31.93 | 395 | -- | -- |
| 45.95 | 0.318 | 11.4 | -0.451 | 1.11 | -- | 0.142 | -- | -0.215 | 6.43 | -- | -- | -- | -- |
| 46 | 0.318 | 11.4 | -0.449 | 1.11 | -- | -- | -- | -0.215 | 6.43 | -- | -- | -- | -- |
| 60.76 | 0.363 | 11.4 | -0.0222 | -- | 1.72 | -- | -- | 0.109 | -- | 30.99 | 390 | -- | -- |
| 31.87 | 0.263 | 11.3 | -- | 0.941 | 1.13 | -- | -- | 0.0362 | 7.65 | 28.64 | 86 | -- | -- |
| 110.06 | 0.49 | 11.4 | -0.421 | -- | -- | -- | -- | -0.192 | -- | -- | -- | -- | -- |
| 51.31 | 0.335 | 11.4 | -- | 1.1 | -- | -- | -- | -0.165 | 6.45 | -- | -- | -- | -- |
| 60.77 | 0.363 | 11.3 | -- | -- | 1.73 | -- | -- | 0.116 | -- | 30.94 | 390 | -- | -- |
| 114.72 | 0.5 | 11.4 | -- | -- | -- | -- | -- | -0.145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.78 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 2 | 31.11 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 3 | 31.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 6 | 31.31 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 7 | 31.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 8 | 31.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 12 | 31.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 15 | 31.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 20 | 31.70 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 22 | 31.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 24 | 31.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 26 | 31.82 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 33 | 32.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 57 | 32.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 80 | 32.46 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 83 | 32.46 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 108 | 32.55 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 110 | 32.57 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 130 | 32.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 135 | 32.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 144 | 32.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 188 | 32.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 238 | 32.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 270 | 33.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 312 | 33.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 318 | 33.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 320 | 33.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 330 | 33.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 335 | 33.17 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 369 | 33.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 397 | 33.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 398 | 33.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 465 | 33.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 502 | 33.48 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 510 | 33.50 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 578 | 33.60 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 13 |
| 596 | 33.63 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 627 | 33.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 629 | 33.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 630 | 33.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 650 | 33.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 651 | 33.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 938 | 33.94 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |