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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0668600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.04 (0.02) R2 : 0.00248
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0447 (0.042) R2dN8 : 0.0032 R2N8 : 0.00248
σ : 0.376
deviance : 64.89
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.5 0.371 3.04 0.0255 0.195 -0.274 -0.159 0.53 0.0663 12.9 40 391 -- --
62.72 0.369 3.04 0.00165 0.188 -0.27 -0.0608 -- 0.0599 12.9 42.95 390 -- --
62.59 0.368 3.04 0.019 0.192 -0.269 -- 0.408 0.0631 13 39.8 390 -- --
62.73 0.369 3.04 0.00123 0.19 -0.279 -- -- 0.0593 13 42.77 386 -- --
64.34 0.374 3.04 0.00125 -- -0.142 -- 0.157 0.0464 -- 48.68 474 -- --
63.78 0.374 3.04 0.00593 0.133 -- -0.0388 -- 0.046 11 -- -- -- --
63.78 0.374 3.04 0.00439 0.134 -- -- -- 0.0459 11 -- -- -- --
64.17 0.373 3.05 0.0033 -- -0.161 -- -- 0.0437 -- 46.87 1266 -- --
62.73 0.369 3.04 -- 0.19 -0.279 -- -- 0.0592 13 42.78 386 -- --
64.89 0.376 3.04 0.00142 -- -- -- -- 0.0449 -- -- -- -- --
63.78 0.374 3.04 -- 0.134 -- -- -- 0.0454 11 -- -- -- --
64.16 0.373 3.04 -- -- -0.161 -- -- 0.0483 -- 45.41 1264 -- --
64.89 0.376 3.04 -- -- -- -- -- 0.0447 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.45 humidity 90.0 30 > th dose independent rect. 13 1
11 54.45 humidity 90.0 30 > th dose dependent rect. 13 1
37 54.57 wind 1.0 90 < th dose dependent rect. 12 1
42 55.72 wind 1.0 90 < th dose independent rect. 12 1
59 58.41 radiation 10.0 10 < th dose dependent rect. 14 1
74 59.03 temperature 10.0 1440 > th dose independent rect. 21 1
77 59.03 temperature 30.0 1440 < th dose independent rect. 21 1
81 59.03 humidity 50.0 1440 > th dose independent rect. 21 1
87 59.03 atmosphere 995.0 1440 > th dose independent rect. 21 1
88 59.03 radiation 1.0 1440 < th dose independent rect. 21 1
108 59.03 temperature 10.0 1440 > th dose independent rect. 22 23
111 59.04 radiation 30.0 1440 < th dose dependent rect. 21 1
114 59.06 wind 9.0 1440 < th dose independent rect. 21 1
115 59.06 temperature 25.0 30 > th dose independent rect. 20 1
117 59.09 wind 3.0 30 > th dose independent rect. 20 1
118 59.10 atmosphere 1005.0 30 > th dose dependent rect. 20 1
121 59.11 humidity 80.0 30 > th dose independent rect. 20 1
122 59.11 temperature 20.0 30 > th dose dependent rect. 20 1
126 59.13 radiation 40.0 14400 < th dose dependent rect. 21 1
127 59.14 humidity 90.0 30 < th dose independent rect. 20 1
128 59.14 wind 9.0 30 < th dose independent rect. 21 23
132 59.16 atmosphere 1005.0 30 > th dose independent rect. 20 1
133 59.16 wind 1.0 30 > th dose dependent rect. 20 1
135 59.17 wind 7.0 30 < th dose independent rect. 20 1
141 59.18 temperature 10.0 30 > th dose independent rect. 20 1
143 59.18 temperature 30.0 30 < th dose independent rect. 20 1
144 59.18 humidity 50.0 30 > th dose independent rect. 20 1
147 59.18 atmosphere 995.0 30 > th dose independent rect. 20 1
149 59.18 atmosphere 1010.0 30 < th dose independent rect. 20 1
151 59.18 radiation 1.0 30 < th dose independent rect. 20 1
156 59.18 precipitation 0.1 30 < th dose independent rect. 20 1
157 59.18 temperature 10.0 30 > th dose independent rect. 21 23
158 59.18 radiation 1.0 30 < th dose dependent rect. 20 1
163 59.18 precipitation 0.1 30 < th dose dependent rect. 20 1
164 59.19 humidity 50.0 30 > th dose dependent rect. 20 1
170 59.22 wind 9.0 30 < th dose dependent rect. 20 1
174 59.27 wind 7.0 10 > th dose independent rect. 12 1
179 59.33 humidity 90.0 30 < th dose dependent rect. 20 1
180 59.33 atmosphere 1015.0 30 < th dose dependent rect. 20 1
192 59.45 temperature 30.0 30 < th dose dependent rect. 20 1
272 60.19 radiation 40.0 1440 > th dose dependent rect. 15 1
306 60.43 radiation 40.0 1440 > th dose independent rect. 15 1
330 60.55 radiation 10.0 10 < th dose independent rect. 14 1
332 60.56 atmosphere 995.0 30 > th dose independent rect. 21 23
348 60.77 radiation 40.0 30 < th dose independent rect. 10 4
369 61.04 precipitation 0.1 30 < th dose independent rect. 21 23
370 61.04 precipitation 0.1 30 < th dose dependent rect. 21 23
380 61.18 radiation 40.0 10 < th dose dependent rect. 10 4
393 61.24 radiation 10.0 10 < th dose dependent rect. 20 19
398 61.27 wind 5.0 10 > th dose dependent rect. 12 1
405 61.31 radiation 40.0 30 < th dose independent rect. 20 18
431 61.49 wind 3.0 10 < th dose dependent rect. 13 1
438 61.53 precipitation 0.1 1440 < th dose independent rect. 21 1
439 61.53 precipitation 0.1 1440 < th dose dependent rect. 21 1
442 61.54 radiation 10.0 90 < th dose dependent rect. 19 19
450 61.59 radiation 40.0 270 < th dose independent rect. 10 1
486 61.70 radiation 40.0 10 < th dose dependent rect. 20 18
527 61.77 radiation 40.0 270 < th dose independent rect. 17 21
554 61.82 temperature 10.0 1440 > th dose independent rect. 11 1
558 61.82 atmosphere 995.0 1440 > th dose independent rect. 11 1
561 61.82 precipitation 0.1 1440 < th dose independent rect. 11 1
564 61.82 temperature 10.0 1440 > th dose independent rect. 12 23
568 61.82 precipitation 0.1 1440 < th dose dependent rect. 11 1
571 61.83 wind 3.0 10 < th dose independent rect. 13 1
584 61.85 wind 9.0 720 < th dose independent rect. 9 12
591 61.87 precipitation 0.1 720 < th dose independent rect. 9 12
593 61.87 precipitation 0.1 720 < th dose dependent rect. 9 12
604 61.90 humidity 60.0 720 > th dose independent rect. 21 12
606 61.91 humidity 70.0 30 < th dose independent rect. 10 1
610 61.92 temperature 25.0 30 > th dose dependent rect. 10 1
613 61.93 temperature 10.0 720 > th dose independent rect. 9 12
614 61.93 temperature 10.0 720 > th dose independent rect. 21 12
616 61.93 atmosphere 995.0 720 > th dose independent rect. 21 12
623 61.95 atmosphere 995.0 30 > th dose independent rect. 14 6
633 61.96 wind 9.0 720 < th dose independent rect. 17 4
635 61.96 atmosphere 1015.0 720 < th dose independent rect. 9 12
640 61.97 wind 9.0 720 < th dose independent rect. 21 12
644 61.97 wind 1.0 270 < th dose dependent rect. 10 10
648 61.98 humidity 60.0 30 > th dose independent rect. 20 18
656 61.99 humidity 60.0 30 > th dose independent rect. 10 4
660 61.99 wind 1.0 90 > th dose independent rect. 19 10
663 62.00 atmosphere 1010.0 30 < th dose independent rect. 10 1
664 62.00 radiation 20.0 30 > th dose independent rect. 10 1
665 62.00 temperature 30.0 720 < th dose independent rect. 17 4
668 62.00 atmosphere 995.0 720 > th dose independent rect. 21 20
679 62.01 temperature 30.0 720 < th dose independent rect. 21 12
680 62.01 radiation 40.0 270 < th dose independent rect. 9 12
685 62.01 atmosphere 995.0 10 > th dose dependent rect. 14 6
687 62.02 atmosphere 1000.0 720 > th dose independent rect. 5 4
689 62.02 humidity 80.0 30 < th dose dependent rect. 10 1
691 62.03 temperature 25.0 30 > th dose independent rect. 10 1
692 62.03 atmosphere 1005.0 30 > th dose independent rect. 10 1
695 62.03 radiation 40.0 10 < th dose independent rect. 10 19
697 62.03 radiation 40.0 270 < th dose independent rect. 7 22
700 62.04 radiation 40.0 30 < th dose independent rect. 10 1
701 62.04 radiation 10.0 270 < th dose independent rect. 10 18
703 62.04 wind 9.0 720 < th dose independent rect. 9 20
704 62.04 humidity 50.0 30 > th dose independent rect. 21 23
716 62.05 atmosphere 1015.0 30 < th dose independent rect. 21 23
723 62.06 precipitation 0.1 720 < th dose independent rect. 9 20
726 62.06 atmosphere 1000.0 30 > th dose dependent rect. 10 1
730 62.06 radiation 10.0 90 < th dose dependent rect. 12 17
731 62.06 precipitation 0.1 720 < th dose dependent rect. 9 20
736 62.07 humidity 50.0 720 > th dose independent rect. 17 4
745 62.08 precipitation 0.1 720 < th dose independent rect. 21 12
752 62.08 precipitation 0.1 720 < th dose dependent rect. 21 12
755 62.09 humidity 60.0 720 > th dose independent rect. 5 4
760 62.09 atmosphere 1015.0 30 < th dose independent rect. 20 18
765 62.10 wind 9.0 720 < th dose independent rect. 5 4
766 62.10 temperature 10.0 720 > th dose independent rect. 5 4
769 62.10 atmosphere 1015.0 720 < th dose independent rect. 5 4
771 62.10 wind 9.0 30 < th dose independent rect. 20 18
772 62.10 temperature 10.0 720 > th dose independent rect. 9 20
780 62.11 precipitation 0.1 720 < th dose independent rect. 17 4
781 62.11 radiation 40.0 30 < th dose independent rect. 14 6
784 62.11 precipitation 0.1 720 < th dose dependent rect. 17 4
787 62.12 temperature 30.0 30 < th dose independent rect. 10 1
788 62.12 temperature 10.0 720 > th dose independent rect. 17 4
789 62.12 radiation 30.0 720 < th dose independent rect. 17 4
791 62.12 precipitation 0.1 720 < th dose independent rect. 5 4
793 62.12 temperature 10.0 720 > th dose independent rect. 21 20
796 62.12 temperature 25.0 30 > th dose dependent rect. 20 4
797 62.12 precipitation 0.1 720 < th dose dependent rect. 5 4
798 62.13 wind 5.0 30 < th dose independent rect. 10 1
800 62.13 humidity 60.0 30 > th dose independent rect. 10 1
805 62.13 atmosphere 995.0 90 > th dose independent rect. 5 14
807 62.13 wind 5.0 30 < th dose dependent rect. 10 1
815 62.14 temperature 10.0 30 > th dose independent rect. 10 1
822 62.14 precipitation 0.1 30 < th dose independent rect. 10 1
823 62.14 temperature 10.0 1440 > th dose independent rect. 15 6
827 62.14 temperature 10.0 1440 > th dose independent rect. 21 18
830 62.14 temperature 10.0 30 > th dose independent rect. 11 23
831 62.14 precipitation 0.1 30 < th dose dependent rect. 10 1
837 62.15 wind 9.0 30 < th dose independent rect. 14 6
838 62.15 temperature 10.0 30 > th dose independent rect. 14 6
840 62.15 atmosphere 1010.0 30 < th dose independent rect. 14 6
843 62.15 humidity 90.0 10 < th dose independent rect. 12 8
844 62.15 radiation 40.0 270 < th dose independent rect. 9 17
845 62.15 temperature 10.0 30 > th dose independent rect. 20 18
847 62.15 atmosphere 995.0 30 > th dose independent rect. 20 18
848 62.15 atmosphere 1000.0 30 > th dose independent rect. 14 20
859 62.16 wind 1.0 30 > th dose independent rect. 10 1
860 62.16 humidity 90.0 10 < th dose independent rect. 4 1
865 62.16 wind 1.0 30 > th dose independent rect. 14 6
867 62.16 precipitation 0.1 30 < th dose independent rect. 20 18
871 62.16 humidity 50.0 10 > th dose dependent rect. 10 4
872 62.16 radiation 40.0 720 < th dose dependent rect. 17 4
874 62.16 precipitation 0.1 30 < th dose dependent rect. 20 18
878 62.17 atmosphere 1015.0 720 < th dose independent rect. 17 4
885 62.17 precipitation 0.1 10 < th dose independent rect. 14 6
891 62.17 atmosphere 1005.0 90 < th dose dependent rect. 12 1
892 62.17 radiation 1.0 30 > th dose dependent rect. 10 1
895 62.17 precipitation 0.1 10 < th dose dependent rect. 14 6
896 62.18 wind 1.0 720 > th dose independent rect. 21 2
898 62.18 wind 1.0 720 > th dose independent rect. 17 4
903 62.18 radiation 40.0 10 < th dose independent rect. 10 14
909 62.19 temperature 30.0 720 < th dose independent rect. 5 4
913 62.19 wind 1.0 30 > th dose independent rect. 20 18
926 62.20 wind 1.0 720 > th dose independent rect. 9 12
935 62.21 temperature 10.0 30 > th dose dependent rect. 14 6
945 62.22 radiation 40.0 30 < th dose independent rect. 14 20
953 62.23 humidity 60.0 270 > th dose independent rect. 10 1
960 62.23 atmosphere 995.0 10 > th dose independent rect. 5 15
970 62.24 atmosphere 995.0 720 > th dose independent rect. 17 4
976 62.24 wind 7.0 90 < th dose independent rect. 19 10
984 62.24 radiation 10.0 10 < th dose dependent rect. 20 11
998 62.26 wind 3.0 10 > th dose independent rect. 12 8
1000 62.26 radiation 40.0 30 < th dose independent rect. 10 11