BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0389100 Os03g0389100|AK063170
(302 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0389100 Peptidase C14, caspase catalytic domain contai... 629 0.0
Os03g0389000 Peptidase C14, caspase catalytic domain contai... 295 4e-80
Os03g0389400 Zinc finger, LSD1-type domain containing protein 273 2e-73
Os03g0388900 Peptidase C14, caspase catalytic domain contai... 169 3e-42
Os05g0496500 Similar to Latex-abundant protein 84 2e-16
Os01g0799900 Similar to Latex-abundant protein 83 2e-16
Os05g0496400 Peptidase C14, caspase catalytic domain contai... 74 1e-13
Os10g0565100 Similar to Metacaspase 1 71 1e-12
Os11g0134700 Similar to Metacaspase 7 (Metacaspase 4) 71 1e-12
>Os03g0389100 Peptidase C14, caspase catalytic domain containing protein
Length = 302
Score = 629 bits (1623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MAVVSGGKRALLVGVSYKGDTSRELTGAAEDVKNMNSLLKKFLFPEESIHMLTEELGAKD 60
MAVVSGGKRALLVGVSYKGDTSRELTGAAEDVKNMNSLLKKFLFPEESIHMLTEELGAKD
Sbjct: 1 MAVVSGGKRALLVGVSYKGDTSRELTGAAEDVKNMNSLLKKFLFPEESIHMLTEELGAKD 60
Query: 61 PLKAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKV 120
PLKAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKV
Sbjct: 61 PLKAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKV 120
Query: 121 SGNILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTR 180
SGNILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTR
Sbjct: 121 SGNILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTR 180
Query: 181 WRLSPKKEWAMVPVGGHAISISGCKDYQNSLEPDNTAGGGVMTWSFLEAVGSRRTMTYGE 240
WRLSPKKEWAMVPVGGHAISISGCKDYQNSLEPDNTAGGGVMTWSFLEAVGSRRTMTYGE
Sbjct: 181 WRLSPKKEWAMVPVGGHAISISGCKDYQNSLEPDNTAGGGVMTWSFLEAVGSRRTMTYGE 240
Query: 241 LLDSMRAKVHHRLQQSSSGKCLVTGCLGSLAAKCLPCCFLSVQEPQLCSSKEFNVYEEQF 300
LLDSMRAKVHHRLQQSSSGKCLVTGCLGSLAAKCLPCCFLSVQEPQLCSSKEFNVYEEQF
Sbjct: 241 LLDSMRAKVHHRLQQSSSGKCLVTGCLGSLAAKCLPCCFLSVQEPQLCSSKEFNVYEEQF 300
Query: 301 IL 302
IL
Sbjct: 301 IL 302
>Os03g0389000 Peptidase C14, caspase catalytic domain containing protein
Length = 400
Score = 295 bits (754), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/308 (53%), Positives = 202/308 (65%), Gaps = 21/308 (6%)
Query: 4 VSGGKRALLVGVSYKGDTSRELTGAAEDVKNMNSLL-KKFLFPEESIHMLTEELGAKDPL 62
V G KRALLVGVSYKG +S EL G DV M LL + F FP +SI +LTEELG DP
Sbjct: 105 VPGRKRALLVGVSYKG-SSYELEGTVNDVDCMRRLLGESFGFPADSILVLTEELGEGDPS 163
Query: 63 KAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKVSG 122
++PTR N++ MRWLVEGC AGDSLVFHFSGHG Q+ D NGDEVDG +E LCPVD++ SG
Sbjct: 164 RSPTRANLLAAMRWLVEGCDAGDSLVFHFSGHGVQKLDVNGDEVDGYNEALCPVDFERSG 223
Query: 123 NILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWR 182
ILDD+IN+ IV+PL G KLHAI+DTCHSGT+LDLP+LCR +R G ++W R
Sbjct: 224 KILDDEINETIVRPLVAGAKLHAIVDTCHSGTILDLPFLCRLSRTGY---WQWENHCR-- 278
Query: 183 LSPKKEWAMVPVGGHAISISGCKDYQNSLEPDNTAGG--------GVMTWSFLEAVGSRR 234
+ E A GG AISISGC D Q S + + G MT+SF+ AV S
Sbjct: 279 ---RPELAKGTSGGLAISISGCSDDQKSADSSGFSSEQAAAAAAIGAMTYSFIRAVESEP 335
Query: 235 TMTYGELLDSMRAKVHHRLQQSSSGKCLVTGCLGSLAAKCLPCCFLSVQEPQLCSSKEFN 294
TYG LL +MRA + QQ SS + L+ G LGS K +P VQEPQLC+S+ F+
Sbjct: 336 GTTYGRLLAAMRATIREG-QQGSSVRRLLPGRLGSFVRKMIPSG--GVQEPQLCASEVFD 392
Query: 295 VYEEQFIL 302
+Y + F+L
Sbjct: 393 IYRKPFLL 400
>Os03g0389400 Zinc finger, LSD1-type domain containing protein
Length = 369
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/303 (49%), Positives = 193/303 (63%), Gaps = 22/303 (7%)
Query: 4 VSGGKRALLVGVSYKGDTSRELTGAAEDVKNMNSLLK-KFLFPEESIHMLTEELGAKDPL 62
VSG KRALLVG+SY T EL G DV M+ LL+ +F FP + I +LT+E G DP
Sbjct: 85 VSGKKRALLVGISYAA-TGYELKGTVNDVNCMSFLLRERFAFPADCILVLTQENG--DPY 141
Query: 63 KAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKVSG 122
+ PTR N++ MRWLVEGC AGDSLV HFSGHG Q+ D +GDE DG DE LCPVD++ +G
Sbjct: 142 RVPTRANLLAAMRWLVEGCSAGDSLVLHFSGHGVQKLDVDGDEADGYDEALCPVDFERAG 201
Query: 123 NILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWR 182
ILDD+IN+ IV+PL GVKLHAI+DTCHSGT+LDLP+LCR +R G ++W R
Sbjct: 202 VILDDEINETIVRPLVAGVKLHAIVDTCHSGTILDLPFLCRLSRTGY---WQWENHCR-- 256
Query: 183 LSPKKEWAMVPVGGHAISISGCKDYQNSLEPDNTAGG---GVMTWSFLEAVGSRRTMTYG 239
+ E A GG AISISGC D Q S + +GG G MT+SF++AV + TYG
Sbjct: 257 ---RPELAKGTSGGLAISISGCGDSQTSSDTTAFSGGAATGAMTYSFIKAVETEPGTTYG 313
Query: 240 ELLDSMRAKVHHRLQQSSSGKCLVTGCLGSLAAKCLPCCFLSVQEPQLCSSKEFNVYEEQ 299
LL +MRA + + LG+ + + F QEPQLC+S+ F++Y +
Sbjct: 314 RLLSAMRATIRGGGGEVGIPG-----PLGAFFRRVI--TFSCAQEPQLCASEPFDIYRKP 366
Query: 300 FIL 302
F+L
Sbjct: 367 FLL 369
>Os03g0388900 Peptidase C14, caspase catalytic domain containing protein
Length = 218
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 134/232 (57%), Gaps = 19/232 (8%)
Query: 74 MRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKVSGNILDDDINDAI 133
M WLV+GC +GDSLVFHFSG G Q DD+GDEVDG DE +CP+D G ILDD+IN+AI
Sbjct: 3 MNWLVQGCSSGDSLVFHFSGIGVQVPDDDGDEVDGYDEAICPMDSFSQGPILDDEINEAI 62
Query: 134 VKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWR-LSPKKEWAMV 192
V+PL G KLHA++D HS T+LDLP+LC L SR G +W P
Sbjct: 63 VRPLVHGAKLHAVVDAEHSSTVLDLPFLCC-----LSSRS---GGWQWEDHRPPTGAYKG 114
Query: 193 PVGGHAISISGCKDYQN--SLEPDNTAGGGVMTWSFLEAVGSRRTMTYGELLDSMRAKVH 250
GG A+ SGC D N SL P+ + G MT SF++AV TYG LL +MR+
Sbjct: 115 SSGGQAMLFSGCSDGNNKHSLLPEAST-VGAMTHSFIKAVECEPRATYGSLLTTMRS--- 170
Query: 251 HRLQQSSSGKCLVTGCLGSLAAKCLPCCFLSVQEPQLCSSKEFNVYEEQFIL 302
+ + C + G +G+ K F +QEP L S+ F++Y + F+L
Sbjct: 171 --IMRDGGVTCNLQGPIGAPIRKV--ANFSGIQEPNLSCSEMFDIYRKPFVL 218
>Os05g0496500 Similar to Latex-abundant protein
Length = 420
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 4 VSGGKRALLVGVSYKGDTSRELTGAAEDVKNMN-SLLKKFLFPEESIHMLTEELGAKDPL 62
+ G KRALLVG++Y G T EL G DV M +L+ +F F E I +L + A
Sbjct: 1 MGGRKRALLVGINYPG-TKAELKGCHNDVARMRRALVDRFGFDEADIRVLAD---ADRSA 56
Query: 63 KAPTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVD-GRDEELCPVDYKVS 121
PT NI +E+ LV R GD L FH+SGHG + + G + D G DE + P D +
Sbjct: 57 PQPTGANIRRELARLVGDARPGDFLFFHYSGHGTRLPAETGQDDDTGYDECIVPSDMNL- 115
Query: 122 GNILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLD 157
I D D + +V+ + + D+CHSG +LD
Sbjct: 116 --ITDQDFTE-LVQKVPDDCLFTIVSDSCHSGGLLD 148
>Os01g0799900 Similar to Latex-abundant protein
Length = 417
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 6 GGKRALLVGVSYKGDTSRELTGAAEDVKNMNS-LLKKFLFPEESIHMLTEELGAKDPLKA 64
G KRALLVG++Y G T EL G DV M+ L+ +F F E+ I +L L
Sbjct: 2 GRKRALLVGINYPG-TKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVL---LDRDSSGTQ 57
Query: 65 PTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVD-GRDEELCPVDYKVSGN 123
PT NI + + LV R GD L FH+SGHG + + G D G DE + P D +
Sbjct: 58 PTGANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNL--- 114
Query: 124 ILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWRL 183
I D D + +V+ + G + D+CHSG +LD ++G +R Q+R R
Sbjct: 115 ITDQDFRE-LVQKVPNGCLFTIVSDSCHSGGLLDSAK----EQIGNSTRQNQT-QSRERE 168
Query: 184 SP 185
P
Sbjct: 169 EP 170
>Os05g0496400 Peptidase C14, caspase catalytic domain containing protein
Length = 409
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 6 GGKRALLVGVSYKGDTSRELTGAAEDVKNMNS-LLKKFLFPEESIHMLTEELGAKDPLKA 64
G KRA+LVG++Y G T EL G DV M L+ +F F E I +L + A
Sbjct: 2 GRKRAVLVGINYAG-TEGELKGCLNDVARMRRCLVDRFGFDEADIRVLAD---ADPSTPQ 57
Query: 65 PTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVDGRDEELCPVDYKVSGNI 124
PT NI E+ LV R GD+L FH+SGHG Q + G + D + C V + N+
Sbjct: 58 PTGANIRLELERLVGDARPGDTLFFHYSGHGLQLPIETGGDDDDTGYDECIVPCDM--NL 115
Query: 125 LDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLD 157
+ D +V+ + G + D+CHSG ++D
Sbjct: 116 IKDQDFTELVQKVPDGCLFTMVSDSCHSGGLID 148
>Os10g0565100 Similar to Metacaspase 1
Length = 161
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 148 DTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWRLSPKKEWAMVPVGGHAISISGCKDY 207
D CHSGT LDLP+LCR NR G +Y W P+ GG IS SGC D
Sbjct: 1 DACHSGTALDLPFLCRMNRSG---QYVWEDH-----RPRSGVWKGTSGGECISFSGCDDD 52
Query: 208 QNSLEP---DNTAGGGVMTWSFLEAVGSRRTMTYGELLDSMRAKVHHRLQQSSSGKCLVT 264
Q S + G MT+ F++A+ + TYG +L SMR+ + SG VT
Sbjct: 53 QTSADTSALSKITSTGAMTFCFIQAIERGQGTTYGSILTSMRSTIRSTGDSMGSGGGAVT 112
>Os11g0134700 Similar to Metacaspase 7 (Metacaspase 4)
Length = 341
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
Query: 8 KRALLVGVSYKGDTSRELTGAAEDVKNM-NSLLKKFLFPEESIHMLTEELGAKDPLKAPT 66
K A LVG +Y G T EL G DV M ++L+ +F F + +LT++ G+ P+ PT
Sbjct: 8 KLATLVGCNYAG-TPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGS--PV-LPT 63
Query: 67 RENIMKEMRWLVEGCRAGDSLVFHFSGHG------RQRKDDNGDEVDGRDEELCPVDYKV 120
NI + + +V GD L FH+SGHG + R+ +G+ DE + P D+
Sbjct: 64 GANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGE----CDEAIVPCDF-- 117
Query: 121 SGNILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDL 158
N++ D +V + +G + D+CHSG ++DL
Sbjct: 118 --NLITDVDFRRLVDRVPRGASFTMVSDSCHSGGLIDL 153
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,541,681
Number of extensions: 517685
Number of successful extensions: 1273
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1253
Number of HSP's successfully gapped: 9
Length of query: 302
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 202
Effective length of database: 11,814,401
Effective search space: 2386509002
Effective search space used: 2386509002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)