Os01g0799900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Latex-abundant protein.
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Os01g0799900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Latex-abundant protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.59 | 0.679 | 7.75 | -0.683 | 1.05 | 0.926 | -1.38 | -2.93 | -0.469 | 6.85 | 7.101 | 650 | -- | -- |
| 213.89 | 0.681 | 7.69 | -0.182 | 1.09 | 0.929 | -0.762 | -- | -0.336 | 6.66 | 4.675 | 551 | -- | -- |
| 212.81 | 0.679 | 7.74 | -0.576 | 1.08 | 0.961 | -- | -2.07 | -0.447 | 6.81 | 12.3 | 645 | -- | -- |
| 215.26 | 0.683 | 7.69 | -0.199 | 1.1 | 0.966 | -- | -- | -0.338 | 6.63 | 6.152 | 515 | -- | -- |
| 247.16 | 0.732 | 7.77 | -0.687 | -- | 0.765 | -- | -2.56 | -0.429 | -- | 14.39 | 1296 | -- | -- |
| 223.84 | 0.701 | 7.67 | 0.035 | 0.847 | -- | -0.936 | -- | -0.198 | 6.52 | -- | -- | -- | -- |
| 226.03 | 0.704 | 7.66 | 0.0222 | 0.843 | -- | -- | -- | -0.194 | 6.58 | -- | -- | -- | -- |
| 253.06 | 0.741 | 7.72 | -0.327 | -- | 0.771 | -- | -- | -0.343 | -- | 5.568 | 5689 | -- | -- |
| 216.19 | 0.685 | 7.68 | -- | 1.08 | 0.881 | -- | -- | -0.306 | 6.57 | 9.046 | 479 | -- | -- |
| 263.02 | 0.758 | 7.68 | 0.0426 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 226.04 | 0.703 | 7.66 | -- | 0.843 | -- | -- | -- | -0.197 | 6.58 | -- | -- | -- | -- |
| 255.07 | 0.744 | 7.7 | -- | -- | 0.639 | -- | -- | -0.276 | -- | 9.141 | 1304 | -- | -- |
| 263.07 | 0.757 | 7.68 | -- | -- | -- | -- | -- | -0.182 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.23 | atmosphere | 1005 | 90 | > th | dose dependent | sin | 17 | NA |
| 4 | 204.81 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 11 | 12 |
| 5 | 204.83 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 6 | 204.92 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 10 | 205.03 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 9 | 15 |
| 12 | 205.07 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 13 | 205.17 | humidity | 80 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 16 | 205.26 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 18 | 205.33 | wind | 9 | 10 | > th | dose dependent | rect. | 17 | 21 |
| 24 | 205.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 25 | 205.45 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 35 | 205.65 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 36 | 205.65 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 39 | 205.72 | humidity | 80 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 42 | 205.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 50 | 205.84 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 56 | 205.91 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 64 | 205.95 | humidity | 80 | 14400 | < th | dose independent | rect. | 7 | 14 |
| 65 | 205.95 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 67 | 205.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 69 | 205.97 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 75 | 206.00 | humidity | 80 | 14400 | < th | dose independent | rect. | 7 | 11 |
| 77 | 206.00 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 14 | 9 |
| 86 | 206.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 103 | 206.14 | atmosphere | 1005 | 270 | > th | dose independent | sin | 18 | NA |
| 111 | 206.17 | humidity | 80 | 14400 | > th | dose independent | sin | 23 | NA |
| 112 | 206.17 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 119 | 206.20 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 124 | 206.21 | humidity | 80 | 14400 | < th | dose independent | sin | 23 | NA |
| 129 | 206.21 | humidity | 70 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 177 | 206.33 | humidity | 70 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 178 | 206.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 192 | 206.36 | humidity | 70 | 14400 | > th | dose dependent | rect. | 7 | 16 |
| 193 | 206.37 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 15 | 9 |
| 239 | 206.45 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 16 | 1 |
| 260 | 206.48 | humidity | 70 | 14400 | > th | dose dependent | sin | 23 | NA |
| 311 | 206.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 335 | 206.61 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 3 |
| 380 | 206.65 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 387 | 206.67 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 453 | 206.75 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 514 | 206.85 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 539 | 206.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 544 | 206.88 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 545 | 206.88 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 586 | 206.93 | humidity | 70 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 641 | 206.99 | humidity | 70 | 14400 | > th | dose dependent | no | NA | NA |
| 644 | 206.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 666 | 207.02 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 667 | 207.02 | humidity | 70 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 678 | 207.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 700 | 207.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 13 |
| 752 | 207.11 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 757 | 207.12 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 758 | 207.12 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 787 | 207.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 11 |
| 799 | 207.17 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 822 | 207.19 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 982 | 207.32 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 1 |