BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0799900 Os01g0799900|AK072822
(417 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0799900 Similar to Latex-abundant protein 868 0.0
Os05g0496500 Similar to Latex-abundant protein 634 0.0
Os05g0496400 Peptidase C14, caspase catalytic domain contai... 438 e-123
Os11g0134700 Similar to Metacaspase 7 (Metacaspase 4) 181 1e-45
Os03g0389000 Peptidase C14, caspase catalytic domain contai... 100 2e-21
Os03g0389400 Zinc finger, LSD1-type domain containing protein 95 1e-19
Os03g0389100 Peptidase C14, caspase catalytic domain contai... 83 3e-16
>Os01g0799900 Similar to Latex-abundant protein
Length = 417
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/417 (100%), Positives = 417/417 (100%)
Query: 1 MGRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTG 60
MGRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTG
Sbjct: 1 MGRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTG 60
Query: 61 ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDF 120
ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDF
Sbjct: 61 ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDF 120
Query: 121 RELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGFRSF 180
RELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGFRSF
Sbjct: 121 RELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGFRSF 180
Query: 181 LKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHTKNRSLPLSTLIEMLKEK 240
LKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHTKNRSLPLSTLIEMLKEK
Sbjct: 181 LKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHTKNRSLPLSTLIEMLKEK 240
Query: 241 TGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLAQEF 300
TGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLAQEF
Sbjct: 241 TGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLAQEF 300
Query: 301 LKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWAPNNGILISGCQSNQTSADATTPQGS 360
LKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWAPNNGILISGCQSNQTSADATTPQGS
Sbjct: 301 LKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWAPNNGILISGCQSNQTSADATTPQGS 360
Query: 361 SYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVSFIC 417
SYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVSFIC
Sbjct: 361 SYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVSFIC 417
>Os05g0496500 Similar to Latex-abundant protein
Length = 420
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/426 (74%), Positives = 357/426 (83%), Gaps = 18/426 (4%)
Query: 2 GRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGA 61
GRKRALLVGINYPGTKAELKGCHNDV RM R LVDRFGFDE DIRVL D D S QPTGA
Sbjct: 3 GRKRALLVGINYPGTKAELKGCHNDVARMRRALVDRFGFDEADIRVLADADRSAPQPTGA 62
Query: 62 NIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDFR 121
NIRR LA+LVGDARPGDFLFFHYSGHGTRLPAETGQ+DDTGYDECIVPSDMNLITDQDF
Sbjct: 63 NIRRELARLVGDARPGDFLFFHYSGHGTRLPAETGQDDDTGYDECIVPSDMNLITDQDFT 122
Query: 122 ELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGS-GFRSF 180
ELVQKVP+ CLFTIVSDSCHSGGLLD KEQIG+ST+QNQ Q +REE SDSG+ GFRSF
Sbjct: 123 ELVQKVPDDCLFTIVSDSCHSGGLLDKTKEQIGHSTKQNQAQQIKREERSDSGTGGFRSF 182
Query: 181 ----LKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGH----TKNRSLPLST 232
LKETVRD FES G+H+P QS +D+ E + H KNRSLPLST
Sbjct: 183 LKETLKETVRDAFESRGVHIPH----QSSRRNDDEDEEPHMGSSSHGGDRIKNRSLPLST 238
Query: 233 LIEMLKEKTGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGM 292
LIEMLKEKTGKDDIDVGSIRMTLF++FGDDASPK+KKFMKVML K Q+GQ GG+MG+
Sbjct: 239 LIEMLKEKTGKDDIDVGSIRMTLFSLFGDDASPKIKKFMKVMLTKLQEGQ---HGGVMGL 295
Query: 293 VGSLAQEFLKVKLEGNEE-EAFKPAIEQEVHSVDEVYAGTKTWAPNNGILISGCQSNQTS 351
VG+LAQEF+K KLEGN+E +A +PA++QEVHSV E YAGT T +NG+LISGCQ++QTS
Sbjct: 296 VGALAQEFMKAKLEGNQEADALEPAMKQEVHSVHEAYAGT-TARVSNGVLISGCQTDQTS 354
Query: 352 ADATTPQGSSYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHV 411
ADATTP+G SYGALSNAIQTIL++K G V+NK+LV++AR LL+KQGYTQQPGLYCSD H
Sbjct: 355 ADATTPKGVSYGALSNAIQTILSEKSGRVTNKELVLRARELLSKQGYTQQPGLYCSDKHT 414
Query: 412 HVSFIC 417
V+FIC
Sbjct: 415 SVAFIC 420
>Os05g0496400 Peptidase C14, caspase catalytic domain containing protein
Length = 409
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/437 (56%), Positives = 291/437 (66%), Gaps = 48/437 (10%)
Query: 1 MGRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTG 60
MGRKRA+LVGINY GT+ ELKGC NDV RM RCLVDRFGFDE DIRVL D D S QPTG
Sbjct: 1 MGRKRAVLVGINYAGTEGELKGCLNDVARMRRCLVDRFGFDEADIRVLADADPSTPQPTG 60
Query: 61 ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYD-ECIVPSDMNLITDQD 119
ANIR L +LVGDARPGD LFFHYSGHG +LP ETG +DD ECIVP DMNLI DQD
Sbjct: 61 ANIRLELERLVGDARPGDTLFFHYSGHGLQLPIETGGDDDDTGYDECIVPCDMNLIKDQD 120
Query: 120 FRELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSRERE-----EPSDSG 174
F ELVQKVP+GCLFT+VSDSCHSGGL+D KEQIG+ST+Q++ Q RERE PS
Sbjct: 121 FTELVQKVPDGCLFTMVSDSCHSGGLIDKTKEQIGSSTKQSKIQQRERELRRQQAPSPGT 180
Query: 175 SGFRSFLKETVRDVFESEGIHLPRSRHSQSHYG-------GEDQYE------TYAQPTDG 221
S L+ +R HLPR R Q G GEDQ A T
Sbjct: 181 CSCASLLQIALR--------HLPR-RGGQRIIGSRSRDGVGEDQPPRSQAELLAADATRA 231
Query: 222 HTKNRSLPLSTLIEMLKEKTGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQG 281
KNRSLPLST +EML+E+TGKDD+ VGSIR TLF+ FGDDASPK+++ + MLG+
Sbjct: 232 GIKNRSLPLSTFVEMLRERTGKDDVGVGSIRTTLFHHFGDDASPKIRRLVNAMLGRRH-- 289
Query: 282 QSGEQGGLMGMVGSLAQEFLKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWAPNNGIL 341
G + + K K E + E A +Q + P NG+L
Sbjct: 290 ---------GSATASEEHPDKAKPERVDGEGEAAAAKQGAPETRPL--------PRNGVL 332
Query: 342 ISGCQSNQTSADATTPQGSSYGALSNAIQTILA-DKRGNVSNKDLVMKARSLLAKQGYTQ 400
ISGCQ+++TSADATTP+G SYGALS+AIQ++LA ++RG V+N +LV +AR LLAKQGYTQ
Sbjct: 333 ISGCQTDETSADATTPEGVSYGALSDAIQSVLAEERRGKVTNMELVRRARELLAKQGYTQ 392
Query: 401 QPGLYCSDDHVHVSFIC 417
QPGLYC D H +V+FIC
Sbjct: 393 QPGLYCRDKHANVAFIC 409
>Os11g0134700 Similar to Metacaspase 7 (Metacaspase 4)
Length = 341
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 3 RKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGAN 62
+K A LVG NY GT EL+GC NDV M LV RFGF D+ VL D S PTGAN
Sbjct: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGAN 66
Query: 63 IRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTG-YDECIVPSDMNLITDQDFR 121
I+RALA +V A PGD LFFHYSGHGT +P G+ G DE IVP D NLITD DFR
Sbjct: 67 IKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFR 126
Query: 122 ELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNST 157
LV +VP G FT+VSDSCHSGGL+D KEQIG S
Sbjct: 127 RLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSV 162
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 337 NNGILISGCQSNQTSADA-----TTPQGSSYGALSNAIQTILADKRGNVSNKDLVMKARS 391
++GIL+SGCQ+++TSAD G + GA SNAIQT+LA VSN+ LV AR+
Sbjct: 236 DDGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMARA 295
Query: 392 LLAKQGYTQQPGLYCSDDHVHVSFI 416
+L+ QG+ Q P LYCSD + F+
Sbjct: 296 VLSDQGFEQHPCLYCSDGNAETPFL 320
>Os03g0389000 Peptidase C14, caspase catalytic domain containing protein
Length = 400
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 2 GRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSG---TQP 58
GRKRALLVG++Y G+ EL+G NDVD M R L + FGF D I VL + G P
Sbjct: 107 GRKRALLVGVSYKGSSYELEGTVNDVDCMRRLLGESFGFPADSILVLTEELGEGDPSRSP 166
Query: 59 TGANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDM----NL 114
T AN+ A+ LV GD L FH+SGHG + G D GY+E + P D +
Sbjct: 167 TRANLLAAMRWLVEGCDAGDSLVFHFSGHGVQKLDVNGDEVD-GYNEALCPVDFERSGKI 225
Query: 115 ITDQDFRELVQKVPNGCLFTIVSDSCHSGGLLD 147
+ D+ +V+ + G + D+CHSG +LD
Sbjct: 226 LDDEINETIVRPLVAGAKLHAIVDTCHSGTILD 258
>Os03g0389400 Zinc finger, LSD1-type domain containing protein
Length = 369
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 2 GRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQ-PTG 60
G+KRALLVGI+Y T ELKG NDV+ M L +RF F D I VL + + PT
Sbjct: 87 GKKRALLVGISYAATGYELKGTVNDVNCMSFLLRERFAFPADCILVLTQENGDPYRVPTR 146
Query: 61 ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMN---LITD 117
AN+ A+ LV GD L H+SGHG + G D GYDE + P D +I D
Sbjct: 147 ANLLAAMRWLVEGCSAGDSLVLHFSGHGVQKLDVDGDEAD-GYDEALCPVDFERAGVILD 205
Query: 118 QDFRE-LVQKVPNGCLFTIVSDSCHSGGLLD 147
+ E +V+ + G + D+CHSG +LD
Sbjct: 206 DEINETIVRPLVAGVKLHAIVDTCHSGTILD 236
>Os03g0389100 Peptidase C14, caspase catalytic domain containing protein
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 2 GRKRALLVGINYPG-TKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVL---LDRDSSGTQ 57
G KRALLVG++Y G T EL G DV M+ L+ +F F E+ I +L L
Sbjct: 6 GGKRALLVGVSYKGDTSRELTGAAEDVKNMNS-LLKKFLFPEESIHMLTEELGAKDPLKA 64
Query: 58 PTGANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNL--- 114
PT NI + + LV R GD L FH+SGHG + + G D G DE + P D +
Sbjct: 65 PTRENIMKEMRWLVEGCRAGDSLVFHFSGHGRQRKDDNGDEVD-GRDEELCPVDYKVSGN 123
Query: 115 ITDQDFRE-LVQKVPNGCLFTIVSDSCHSGGLLDSAK----EQIGNSTRQNQT-QSRERE 168
I D D + +V+ + G + D+CHSG +LD ++G +R Q+R R
Sbjct: 124 ILDDDINDAIVKPLTQGVKLHAIIDTCHSGTMLDLPYLCRFNRMGLCSRYKWVGQTRWRL 183
Query: 169 EP 170
P
Sbjct: 184 SP 185
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,048,801
Number of extensions: 677738
Number of successful extensions: 1653
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1637
Number of HSP's successfully gapped: 8
Length of query: 417
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 314
Effective length of database: 11,657,759
Effective search space: 3660536326
Effective search space used: 3660536326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)