Os03g0389000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C14, caspase catalytic domain containing protein.
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Os03g0389000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C14, caspase catalytic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.51 | 0.34 | 8.5 | -0.646 | 0.71 | -1.05 | -0.0535 | 1.18 | -0.0682 | 6.16 | 25.9 | 33 | -- | -- |
| 52.89 | 0.339 | 8.51 | -0.759 | 0.716 | -0.941 | -0.134 | -- | -0.0931 | 6.1 | 25.8 | 29 | -- | -- |
| 52.5 | 0.337 | 8.5 | -0.644 | 0.711 | -1.05 | -- | 1.24 | -0.0654 | 6.17 | 25.9 | 29 | -- | -- |
| 52.95 | 0.339 | 8.51 | -0.763 | 0.715 | -0.941 | -- | -- | -0.0921 | 6.13 | 25.8 | 29 | -- | -- |
| 64.98 | 0.375 | 8.48 | -0.47 | -- | -1.44 | -- | 1.33 | 0.0657 | -- | 24.39 | 250 | -- | -- |
| 65.9 | 0.381 | 8.52 | -0.899 | 0.979 | -- | 0.0209 | -- | -0.136 | 5.19 | -- | -- | -- | -- |
| 65.9 | 0.38 | 8.52 | -0.899 | 0.979 | -- | -- | -- | -0.136 | 5.19 | -- | -- | -- | -- |
| 65.57 | 0.377 | 8.5 | -0.65 | -- | -1.34 | -- | -- | 0.0154 | -- | 24.3 | 252 | -- | -- |
| 67.9 | 0.384 | 8.5 | -- | 0.706 | -1.05 | -- | -- | -0.02 | 6.22 | 25.7 | 30 | -- | -- |
| 116.07 | 0.503 | 8.53 | -0.864 | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
| 87.19 | 0.437 | 8.5 | -- | 0.964 | -- | -- | -- | -0.0362 | 5.23 | -- | -- | -- | -- |
| 76.32 | 0.407 | 8.48 | -- | -- | -1.43 | -- | -- | 0.108 | -- | 24.02 | 252 | -- | -- |
| 135.77 | 0.544 | 8.51 | -- | -- | -- | -- | -- | -0.0157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.31 | temperature | 25 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 4 | 52.44 | temperature | 30 | 30 | < th | dose independent | rect. | 6 | 17 |
| 6 | 52.54 | temperature | 25 | 270 | > th | dose dependent | sin | 3 | NA |
| 11 | 52.58 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 12 | 52.68 | temperature | 25 | 90 | > th | dose dependent | sin | 23 | NA |
| 14 | 52.70 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 11 |
| 17 | 52.71 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 33 | 52.86 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 39 | 52.89 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 55 | 52.96 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 14 |
| 57 | 52.96 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 77 | 53.03 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 100 | 53.11 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 18 |
| 106 | 53.12 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 16 |
| 164 | 53.26 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 172 | 53.26 | temperature | 25 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 266 | 53.41 | temperature | 30 | 30 | < th | dose independent | sin | 23 | NA |
| 395 | 53.74 | temperature | 30 | 90 | < th | dose independent | rect. | 13 | 23 |
| 402 | 53.76 | temperature | 30 | 30 | < th | dose independent | rect. | 11 | 23 |
| 484 | 54.25 | temperature | 30 | 90 | > th | dose independent | sin | 23 | NA |
| 489 | 54.25 | temperature | 25 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 501 | 54.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 15 |
| 550 | 54.45 | temperature | 30 | 30 | < th | dose independent | no | NA | NA |
| 561 | 54.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 572 | 54.51 | temperature | 25 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 584 | 54.55 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 606 | 54.59 | temperature | 30 | 90 | > th | dose independent | rect. | 9 | 9 |
| 624 | 54.61 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 1 |
| 627 | 54.62 | temperature | 30 | 30 | < th | dose independent | rect. | 11 | 12 |
| 655 | 54.69 | temperature | 30 | 30 | > th | dose independent | rect. | 11 | 23 |
| 664 | 54.72 | temperature | 30 | 30 | > th | dose independent | no | NA | NA |
| 771 | 54.73 | temperature | 30 | 30 | > th | dose independent | rect. | 15 | 23 |
| 930 | 54.92 | temperature | 10 | 270 | > th | dose dependent | sin | 1 | NA |
| 935 | 54.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 16 |
| 936 | 54.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 938 | 54.95 | temperature | 30 | 30 | > th | dose independent | rect. | 17 | 23 |
| 939 | 54.95 | temperature | 30 | 90 | < th | dose independent | rect. | 17 | 23 |
| 948 | 54.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 956 | 55.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 17 |
| 975 | 55.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |