Os03g0389100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C14, caspase catalytic domain containing protein.
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Os03g0389100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C14, caspase catalytic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.94 | 0.639 | 11.4 | -1.2 | 0.157 | 2.78 | -1.85 | -7.39 | -0.371 | 20.2 | 22.43 | 1386 | -- | -- |
| 194.46 | 0.649 | 11.3 | -0.0157 | 0.133 | 3.34 | -1.89 | -- | -0.293 | 20.6 | 13.87 | 9589 | -- | -- |
| 194.86 | 0.65 | 11.4 | -1.19 | 0.158 | 2.89 | -- | -7.86 | -0.377 | 18.4 | 22.41 | 1304 | -- | -- |
| 206.67 | 0.67 | 11.3 | -0.0187 | 0.141 | 3.49 | -- | -- | -0.319 | 23.8 | 13.4 | 9359 | -- | -- |
| 196.06 | 0.652 | 11.4 | -1.17 | -- | 2.86 | -- | -7.8 | -0.381 | -- | 22.4 | 1304 | -- | -- |
| 396.36 | 0.933 | 11 | 1.83 | 0.223 | -- | -1.79 | -- | 0.753 | 21.1 | -- | -- | -- | -- |
| 405.7 | 0.943 | 11 | 1.89 | 0.28 | -- | -- | -- | 0.75 | 23.9 | -- | -- | -- | -- |
| 207.63 | 0.671 | 11.3 | -0.0499 | -- | 3.47 | -- | -- | -0.333 | -- | 13.6 | 9506 | -- | -- |
| 206.68 | 0.67 | 11.3 | -- | 0.14 | 3.48 | -- | -- | -0.318 | 23.7 | 13.34 | 9342 | -- | -- |
| 410.65 | 0.947 | 11 | 1.9 | -- | -- | -- | -- | 0.753 | -- | -- | -- | -- | -- |
| 499.84 | 1.05 | 11.1 | -- | 0.305 | -- | -- | -- | 0.539 | 0.224 | -- | -- | -- | -- |
| 207.68 | 0.671 | 11.3 | -- | -- | 3.45 | -- | -- | -0.323 | -- | 13.62 | 9503 | -- | -- |
| 505.71 | 1.05 | 11.1 | -- | -- | -- | -- | -- | 0.543 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.06 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 170.53 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 15 | 176.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 17 | 176.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 22 | 177.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 33 | 178.76 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 34 | 178.82 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 41 | 179.97 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 63 | 182.37 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 17 |
| 65 | 182.43 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 66 | 182.60 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 71 | 182.80 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 73 | 182.87 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 91 | 183.51 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 101 | 183.72 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 107 | 183.82 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 135 | 184.93 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 144 | 185.20 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 149 | 185.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 16 |
| 150 | 185.40 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 152 | 185.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 159 | 185.61 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 173 | 185.77 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 175 | 185.80 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 184 | 185.97 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 186 | 186.00 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 189 | 186.02 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 190 | 186.05 | temperature | 25 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 191 | 186.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 208 | 186.34 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 209 | 186.34 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 214 | 186.36 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 234 | 186.44 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 249 | 186.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 259 | 186.64 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 262 | 186.64 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 266 | 186.67 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 14 |
| 282 | 186.72 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 292 | 186.76 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 293 | 186.76 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 302 | 186.79 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 320 | 186.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 322 | 186.87 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 325 | 186.87 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 336 | 186.91 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 350 | 186.94 | temperature | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 381 | 187.05 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 454 | 187.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 460 | 187.29 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 465 | 187.30 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 466 | 187.30 | temperature | 15 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 481 | 187.36 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 491 | 187.38 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 17 |
| 522 | 187.46 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 540 | 187.52 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 583 | 187.63 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 586 | 187.64 | temperature | 25 | 14400 | < th | dose independent | sin | 16 | NA |
| 606 | 187.68 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 618 | 187.71 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 647 | 187.76 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 664 | 187.81 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 680 | 187.84 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 708 | 187.91 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 776 | 188.06 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 782 | 188.07 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 790 | 188.09 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 816 | 188.16 | wind | 7 | 43200 | > th | dose dependent | sin | 19 | NA |
| 818 | 188.17 | temperature | 25 | 14400 | > th | dose independent | sin | 16 | NA |
| 906 | 188.33 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 908 | 188.33 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 912 | 188.33 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 22 |
| 936 | 188.38 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 948 | 188.40 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 993 | 188.49 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 9 |