BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0799900 Os01g0799900|AK072822
(417 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79330.1 | chr1:29838722-29840137 FORWARD LENGTH=411 477 e-135
AT1G79340.1 | chr1:29842849-29844368 FORWARD LENGTH=419 474 e-134
AT1G79320.1 | chr1:29836686-29837908 FORWARD LENGTH=369 422 e-118
AT1G79310.1 | chr1:29833986-29835412 FORWARD LENGTH=404 406 e-113
AT1G16420.1 | chr1:5612304-5613829 REVERSE LENGTH=382 293 9e-80
AT5G04200.1 | chr5:1153893-1154870 FORWARD LENGTH=326 234 9e-62
AT1G02170.1 | chr1:411883-413426 FORWARD LENGTH=368 105 4e-23
AT4G25110.1 | chr4:12887738-12889953 REVERSE LENGTH=419 103 1e-22
AT5G64240.2 | chr5:25695836-25697249 FORWARD LENGTH=363 96 3e-20
>AT1G79330.1 | chr1:29838722-29840137 FORWARD LENGTH=411
Length = 410
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/422 (57%), Positives = 313/422 (74%), Gaps = 22/422 (5%)
Query: 4 KRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGANI 63
K+A+L+GINYPGTKAEL+GC NDV R+H+ LVDRFGF E +I L+D D S T+PTG NI
Sbjct: 3 KKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESSTKPTGKNI 62
Query: 64 RRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDFREL 123
RRAL LV A+PGD L HYSGHGTRLPAETG++DDTGYDECIVP DMNLITD +FR+L
Sbjct: 63 RRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLITDDEFRDL 122
Query: 124 VQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGFRSFLKE 183
V+KVP TI+SDSCHSGGL+D AKEQIG ST++ ++E SG G + F++E
Sbjct: 123 VEKVPKEAHITIISDSCHSGGLIDEAKEQIGESTKKKP----KKESGGSSGLGIKGFVRE 178
Query: 184 TVRDVFESEGIHLPRSRHSQSHYGGEDQYETYA-QPTDG---HTKNRSLPLSTLIEMLKE 239
V + ES+GI +P H +D+ +T + DG H N+SLPL TLI++LK+
Sbjct: 179 AVEEALESKGIAIPH------HKDEKDENKTKELKLEDGAKVHVVNKSLPLQTLIDILKQ 232
Query: 240 KTGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLAQE 299
TG +DI+VG IR TLFN+FG+DASPKVKKFMKV+L K Q+G++ +GG++GM+G LAQE
Sbjct: 233 NTGNNDIEVGKIRPTLFNVFGEDASPKVKKFMKVILTKLQEGKT--EGGILGMIGKLAQE 290
Query: 300 FLKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWA-PNNGILISGCQSNQTSADATTPQ 358
FLK KL ++EE KPA++ V + EVYAG + +NGILISGCQ++QTSADA +PQ
Sbjct: 291 FLKHKL-NDDEEYVKPAMKTHVGNKQEVYAGASNGSLADNGILISGCQTDQTSADA-SPQ 348
Query: 359 GS---SYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVSF 415
G +YGA +NA+Q IL + +G ++ K+LV+KAR LL KQG++Q+PGLYCSD V+ F
Sbjct: 349 GHPEMAYGAFTNAVQIILEETKGMITYKELVLKARKLLKKQGFSQRPGLYCSDSFVNAPF 408
Query: 416 IC 417
IC
Sbjct: 409 IC 410
>AT1G79340.1 | chr1:29842849-29844368 FORWARD LENGTH=419
Length = 418
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/423 (58%), Positives = 313/423 (73%), Gaps = 16/423 (3%)
Query: 4 KRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGANI 63
K+A+L+GINYPGTKAEL+GC NDV RM++CLV+R+GF E++I VL+D D S TQPTG NI
Sbjct: 3 KKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGKNI 62
Query: 64 RRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDFREL 123
RRALA LV A GD L HYSGHGTRLPAETG++DDTG+DECIVP DMNLITD DFR+L
Sbjct: 63 RRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFRDL 122
Query: 124 VQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGFRSFLKE 183
V KVP GC TI+SDSCHSGGL+D AKEQIG ST++ + + + E S S GFR FL+
Sbjct: 123 VDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKK-EAEDEDESEESSSRFGFRKFLRS 181
Query: 184 TVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDG---HTKNRSLPLSTLIEMLKEK 240
V ES G H+ ++ + E+ + DG H K++SLPL TLI++LK++
Sbjct: 182 KVEGAIESRGFHIGGNKKDEDE--AEEIETKEIELEDGETIHAKDKSLPLQTLIDILKQQ 239
Query: 241 TGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLAQEF 300
TG D+I+VG IR +LF+ FGDD+SPKVKKFMKV+LGK Q G +GE+GGLMGM+G LA F
Sbjct: 240 TGNDNIEVGKIRPSLFDAFGDDSSPKVKKFMKVILGKLQAG-NGEEGGLMGMLGKLASGF 298
Query: 301 LKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWA---PNNGILISGCQSNQTSADATTP 357
L+ KL N+E+ KPA++ V S +EVYAG + P++GILISGCQ++QTSADA TP
Sbjct: 299 LEGKL--NDEDYVKPAMQTHVGSKEEVYAGGSRGSVPLPDSGILISGCQTDQTSADA-TP 355
Query: 358 QGS---SYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVS 414
G +YGA+SN+IQTIL + G +SN+++V +AR L KQG+TQQPGLYC D + +
Sbjct: 356 AGKPTEAYGAMSNSIQTILEETDGEISNREMVTRARKALKKQGFTQQPGLYCHDGYANAP 415
Query: 415 FIC 417
FIC
Sbjct: 416 FIC 418
>AT1G79320.1 | chr1:29836686-29837908 FORWARD LENGTH=369
Length = 368
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/420 (53%), Positives = 284/420 (67%), Gaps = 60/420 (14%)
Query: 4 KRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGANI 63
K+ALL+GINY GTKAEL+GC NDV RM LV+R+GF E++I++L+D DSS +PTG NI
Sbjct: 3 KKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSSIKPTGKNI 62
Query: 64 RRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDFREL 123
R+AL LV A+ GD LF HYSGHGTRLPAETG++DDTGYDECIVPSDMNLITD DFR+L
Sbjct: 63 RQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDL 122
Query: 124 VQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGFRSFLKE 183
V VP C TI+SDSCHSGGL+D AKEQIG ST++ + DSG + KE
Sbjct: 123 VDMVPKDCPITIISDSCHSGGLIDEAKEQIGESTKKKK----------DSGDS-STINKE 171
Query: 184 TVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHTKNRSLPLSTLIEMLKEKTGK 243
T ++ E NRSLPL TLI+MLK++TG
Sbjct: 172 TEAEIIE--------------------------------VGNRSLPLETLIDMLKQETGN 199
Query: 244 DDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQ---GGLMGMVGSLAQEF 300
DDI+VG IR TLF++FGDD+SPKVKKFM V+L Q+ + Q ++G V +LAQEF
Sbjct: 200 DDIEVGKIRTTLFDMFGDDSSPKVKKFMNVILSNLQETTTTIQTVSDEVLGSVENLAQEF 259
Query: 301 LKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWA-PNNGILISGCQSNQTSADATTP-- 357
L+ KL + KPAI+ +VYAG A P+NGILISGCQ++QTS+DA+ P
Sbjct: 260 LEQKLSDD----VKPAIQ-------DVYAGAINGALPDNGILISGCQTDQTSSDASPPGH 308
Query: 358 QGSSYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVSFIC 417
+YGAL+NAIQ I+ + +G +SNKDLV+KAR LL KQG+ Q+PGLYC+D +V+ FIC
Sbjct: 309 PELAYGALTNAIQIIIGETKGKISNKDLVLKARKLLRKQGFDQRPGLYCNDAYVNARFIC 368
>AT1G79310.1 | chr1:29833986-29835412 FORWARD LENGTH=404
Length = 403
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/423 (49%), Positives = 289/423 (68%), Gaps = 31/423 (7%)
Query: 4 KRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGANI 63
KRALL+GINYPGT EL+GC NDV RMH+CLVDRFGF E+DI VL+D D S TQPTG NI
Sbjct: 3 KRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESYTQPTGKNI 62
Query: 64 RRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITDQDFREL 123
R+AL++L+ A+ GD LF HYSGHGTR+P ETG+ DDTG+DECIVPSD+N I D DFR+L
Sbjct: 63 RQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLNPIPDDDFRDL 122
Query: 124 VQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNST-----RQNQTQSREREEPSDSGSGFR 178
V++VP GC TIVSDSCHSGGL+D AKEQIG ST R+++ S E E F+
Sbjct: 123 VEQVPEGCQITIVSDSCHSGGLIDEAKEQIGESTTTKPNRESKVSSFEFE--------FK 174
Query: 179 SFLKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHTKNRSLPLSTLIEMLK 238
+ L + GI SH + E D ++R LPL IE+LK
Sbjct: 175 NCLHSIFVKLLAFCGI-------GSSHVETREIVE--VGEGDEVVRSRYLPLERFIELLK 225
Query: 239 EKTGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLAQ 298
++TG+D+I++G IR TLF++FG+D+SPK+KKFMKV+L K + ++ +Q L+G + A+
Sbjct: 226 QQTGQDNIEIGKIRPTLFDVFGEDSSPKIKKFMKVILTKLR--KTNDQSTLLGKIEESAR 283
Query: 299 EFLKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKT--WAPNNGILISGCQSNQTSADATT 356
+++ L N+E KPA++ +V S E+Y G + P+ GIL+SGCQ+++TSAD
Sbjct: 284 GYIEETL--NDEHYMKPAMQAQVKSDREIYGGRSSNGLFPDRGILLSGCQTDETSADVKK 341
Query: 357 PQGSSYGALSNAIQTILA--DKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVS 414
+G ++GA SNAIQ +L+ D + ++NK++V++AR +L KQ + Q+PGLYC+D V+
Sbjct: 342 -KGEAFGAFSNAIQMVLSETDHKDKITNKEMVLRAREILKKQMFIQRPGLYCNDRFVNAP 400
Query: 415 FIC 417
FIC
Sbjct: 401 FIC 403
>AT1G16420.1 | chr1:5612304-5613829 REVERSE LENGTH=382
Length = 381
Score = 293 bits (751), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 234/427 (54%), Gaps = 62/427 (14%)
Query: 4 KRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPTGANI 63
K+ALL+GINYPGT EL+GC NDV RM +CL++ +GF DI +++D D S QPTG NI
Sbjct: 3 KKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSCIQPTGKNI 62
Query: 64 RRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDD-TGYDECIVPSDMNLITDQDFRE 122
L L+ + GDFL FHYSGHGTR+P ++D TG+DECI P DMNLI DQ FRE
Sbjct: 63 CDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFRE 122
Query: 123 LVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGS---GFRS 179
+V +V GC TI+SDSCHSGGL+ KEQIG S + + +E+ E S G S
Sbjct: 123 MVSRVKEGCQLTIISDSCHSGGLIQEVKEQIGESHMKPVDKVKEQIEESHMKQPKLGIAS 182
Query: 180 FLKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHT---KNRSLPLSTLIEM 236
+ V ++ + G+ S+ + GGE+ + + T K R LP + + +
Sbjct: 183 YFLNIVMNLLATCGV----SKSQRDRGGGEESFRGEIELEKDETLDIKTRYLPFESYLSL 238
Query: 237 LKEKTGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSL 296
LKE+TG+ +I+ IR TL +FG+D SP Q GL +
Sbjct: 239 LKEQTGQTNIEPVRIRQTLLKLFGEDPSP------------------NRQRGLSDL---- 276
Query: 297 AQEFLKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTW--APNNGILISGCQSNQTSADA 354
GN E VD +G +NGIL+SGCQ++Q S D
Sbjct: 277 ----------GNCE-------------VDAGDSGASRLNAVTDNGILLSGCQTDQRSEDV 313
Query: 355 -TTPQGSSYGALSNAIQTILADKRGN---VSNKDLVMKARSLLAKQGYTQQPGLYCSDDH 410
T G +YGA S+AIQ IL+ R + ++NK+LV +AR L K+GY+Q+PGLYC D
Sbjct: 314 YVTRTGKAYGAFSDAIQMILSAPRKDKKKITNKELVSEARVFLKKRGYSQRPGLYCHDRF 373
Query: 411 VHVSFIC 417
V FIC
Sbjct: 374 VDKPFIC 380
>AT5G04200.1 | chr5:1153893-1154870 FORWARD LENGTH=326
Length = 325
Score = 234 bits (596), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 206/419 (49%), Gaps = 105/419 (25%)
Query: 1 MGRKR-ALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQPT 59
M +KR A+LVG NYP T+ EL GC NDV M ++ RFGF +DDI VL D S +PT
Sbjct: 6 MVKKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPESKVKPT 65
Query: 60 GANIRRALAQLVGDARPG--DFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMNLITD 117
GANI+ AL ++V A+ G D LFFHYSGHGTR+P+ + DE IVP D NLITD
Sbjct: 66 GANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHP-FKQDEAIVPCDFNLITD 124
Query: 118 QDFRELVQKVPNGCLFTIVSDSCHSGGLLDSAKEQIGNSTRQNQTQSREREEPSDSGSGF 177
DFRELV ++P G FT++SDSCHSGGL+D KEQIG PS S
Sbjct: 125 VDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIG---------------PSSVSSNI 169
Query: 178 RSFLKETVRDVFESEGIHLPRSRHSQSHYGGEDQYETYAQPTDGHTKNRSLPLSTLIEML 237
++ T + + +R+LP +++ L
Sbjct: 170 SPAIETTNKTI-----------------------------------TSRALPFKAVLDHL 194
Query: 238 KEKTGKDDIDVGSIRMTLFNIFGDDASPKVKKFMKVMLGKFQQGQSGEQGGLMGMVGSLA 297
TG D+G+ L +FG DA K + + M LM ++ ++
Sbjct: 195 SSLTGITTSDIGT---HLLELFGRDAGLKFR--LPAM-------------DLMDLLETMT 236
Query: 298 QEFLKVKLEGNEEEAFKPAIEQEVHSVDEVYAGTKTWAPNNGILISGCQSNQTSADATTP 357
A E+ V S GIL+SGCQ+++TSAD
Sbjct: 237 ------------------AREKHVDS---------------GILMSGCQADETSADVGVG 263
Query: 358 QGSSYGALSNAIQTILADKRGNVSNKDLVMKARSLLAKQGYTQQPGLYCSDDHVHVSFI 416
G +YGA SNAIQ +L + G + NK LVM AR +L + G+ Q P LYCSD + +F+
Sbjct: 264 NGKAYGAFSNAIQRVLNENEGAMKNKQLVMMARDVLERLGFHQHPCLYCSDQNADATFL 322
>AT1G02170.1 | chr1:411883-413426 FORWARD LENGTH=368
Length = 367
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 2 GRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQ-PTG 60
GRKRA++ GI+Y ++ ELKGC ND M L+++F F D I +L + ++ + PT
Sbjct: 78 GRKRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDSILMLTEEETDPYRIPTK 137
Query: 61 ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMN----LIT 116
N+R AL LV GD L FHYSGHG+R G D GYDE + P D ++
Sbjct: 138 QNMRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVD-GYDETLCPLDFETQGMIVD 196
Query: 117 DQDFRELVQKVPNGCLFTIVSDSCHSGGLLD 147
D+ +V+ +P+G + D+CHSG +LD
Sbjct: 197 DEINATIVRPLPHGVKLHSIIDACHSGTVLD 227
>AT4G25110.1 | chr4:12887738-12889953 REVERSE LENGTH=419
Length = 418
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 2 GRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQ-PTG 60
G+KRA++VG++Y TK ELKGC ND + M L+ RF F E I +L + ++ + PT
Sbjct: 114 GQKRAVIVGVSYKNTKDELKGCINDANCMKFMLMKRFQFPESCILMLTEEEADPMRWPTK 173
Query: 61 ANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDMN----LIT 116
NI A+ LV +PGD L FH+SGHG + G D G+DE ++P D ++
Sbjct: 174 NNITMAMHWLVLSCKPGDSLVFHFSGHGNNQMDDNGDEVD-GFDETLLPVDHRTSGVIVD 232
Query: 117 DQDFRELVQKVPNGCLFTIVSDSCHSGGLLD 147
D+ +V+ +P G + D+CHSG ++D
Sbjct: 233 DEINATIVRPLPYGVKLHAIVDACHSGTVMD 263
>AT5G64240.2 | chr5:25695836-25697249 FORWARD LENGTH=363
Length = 362
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 1 MGRKRALLVGINYPGTKAELKGCHNDVDRMHRCLVDRFGFDEDDIRVLLDRDSSGTQ-PT 59
G+KRA+L G+NY G LKGC +D M LV + GF D I +L + ++S + PT
Sbjct: 87 FGKKRAVLCGVNYKGKSYSLKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIPT 146
Query: 60 GANIRRALAQLVGDARPGDFLFFHYSGHGTRLPAETGQNDDTGYDECIVPSDM----NLI 115
NIR+A+ LV R D L FH+SGHG++ G D G DE + P D +I
Sbjct: 147 KRNIRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNGDEID-GQDEALCPLDHETEGKII 205
Query: 116 TDQDFRELVQKVPNGCLFTIVSDSCHSGGLLD 147
D+ R LV+ + +G V D+C+SG +LD
Sbjct: 206 DDEINRILVRPLVHGAKLHAVIDACNSGTVLD 237
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,661,328
Number of extensions: 440513
Number of successful extensions: 1255
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1222
Number of HSP's successfully gapped: 11
Length of query: 417
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 316
Effective length of database: 8,337,553
Effective search space: 2634666748
Effective search space used: 2634666748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)