BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0257600 Os03g0257600|Os03g0257600
(568 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0257600 Protein of unknown function DUF292, eukaryotic... 907 0.0
Os03g0257500 Protein of unknown function DUF292, eukaryotic... 166 3e-41
Os03g0257300 144 3e-34
Os03g0710000 Protein of unknown function DUF292, eukaryotic... 103 3e-22
Os01g0687700 Protein of unknown function DUF292, eukaryotic... 93 6e-19
Os01g0706400 Protein of unknown function DUF292, eukaryotic... 90 5e-18
Os09g0547200 Protein of unknown function DUF292, eukaryotic... 84 2e-16
Os08g0175200 Protein of unknown function DUF292, eukaryotic... 84 3e-16
Os02g0159200 Protein of unknown function DUF292, eukaryotic... 74 4e-13
>Os03g0257600 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 568
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/568 (82%), Positives = 466/568 (82%)
Query: 1 MGLFGGKSASSKQTXXXXXXXXXXXXXXXXXXXXXXXXXSIARGDVAQLLSIGHLDRALL 60
MGLFGGKSASSKQT SIARGDVAQLLSIGHLDRALL
Sbjct: 1 MGLFGGKSASSKQTAKLKSLIKLAAARVAVARRPRLGRRSIARGDVAQLLSIGHLDRALL 60
Query: 61 RVCPCHAFALPDTRRDSSANSSRRVLFLQAEQVIDEDNMLEVLDIVELYCKILIEQATQL 120
RVCPCHAFALPDTRRDSSANSSRRVLFLQAEQVIDEDNMLEVLDIVELYCKILIEQATQL
Sbjct: 61 RVCPCHAFALPDTRRDSSANSSRRVLFLQAEQVIDEDNMLEVLDIVELYCKILIEQATQL 120
Query: 121 DKPKECGEEIKEAAAGLMFASARCGDLPELLDARAILADKFGRDFAAAAKDGAHGVVDPT 180
DKPKECGEEIKEAAAGLMFASARCGDLPELLDARAILADKFGRDFAAAAKDGAHGVVDPT
Sbjct: 121 DKPKECGEEIKEAAAGLMFASARCGDLPELLDARAILADKFGRDFAAAAKDGAHGVVDPT 180
Query: 181 LVRKLSGAPASTEQKQRLTKVIAAENDILLEFPENTGDTDQGKQNEQARNVRAEQFVEQN 240
LVRKLSGAPASTEQKQRLTKVIAAENDILLEFPENTGDTDQGKQNEQARNVRAEQFVEQN
Sbjct: 181 LVRKLSGAPASTEQKQRLTKVIAAENDILLEFPENTGDTDQGKQNEQARNVRAEQFVEQN 240
Query: 241 EVKREHHEVQGRQRFVDEEVNPILARLSVQEQYADXXXXXXXXXXXXXXXXXXXXXXVEL 300
EVKREHHEVQGRQRFVDEEVNPILARLSVQEQYAD VEL
Sbjct: 241 EVKREHHEVQGRQRFVDEEVNPILARLSVQEQYADARMAAEAAFKSASFAAMAARAAVEL 300
Query: 301 XXXXXXXXXXXXXXXXXYEKVHPVQNSVAGEKEAXXXXXXXXXXXXXXXXXXXXXXXATS 360
YEKVHPVQNSVAGEKEA ATS
Sbjct: 301 SRSESQGKGSRGGGGGGYEKVHPVQNSVAGEKEAPPSWKPHKPPSPSTSPSWSDRSTATS 360
Query: 361 VWSEGTQKGKGVVFDGSDEEVDDVAWTPQLRRPPYRRASTMXXXXXXXXXXXXXXXADPQ 420
VWSEGTQKGKGVVFDGSDEEVDDVAWTPQLRRPPYRRASTM ADPQ
Sbjct: 361 VWSEGTQKGKGVVFDGSDEEVDDVAWTPQLRRPPYRRASTMGIGGGAWNGEAGRVGADPQ 420
Query: 421 PFQDGVYNNSQHPRPPHRRHASELGAGAGAPREPLVSLAPQRGQYRDPPYRRDPAAYRDI 480
PFQDGVYNNSQHPRPPHRRHASELGAGAGAPREPLVSLAPQRGQYRDPPYRRDPAAYRDI
Sbjct: 421 PFQDGVYNNSQHPRPPHRRHASELGAGAGAPREPLVSLAPQRGQYRDPPYRRDPAAYRDI 480
Query: 481 NAGAAQRRQPDGAGARPYESSDHVHPPYARIVSALERSNEHIARHEEVRRIGTGERVLQE 540
NAGAAQRRQPDGAGARPYESSDHVHPPYARIVSALERSNEHIARHEEVRRIGTGERVLQE
Sbjct: 481 NAGAAQRRQPDGAGARPYESSDHVHPPYARIVSALERSNEHIARHEEVRRIGTGERVLQE 540
Query: 541 RVYGAGGAPGRAPLNQEQGRLNSVRTRR 568
RVYGAGGAPGRAPLNQEQGRLNSVRTRR
Sbjct: 541 RVYGAGGAPGRAPLNQEQGRLNSVRTRR 568
>Os03g0257500 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 193
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 112/175 (64%), Gaps = 29/175 (16%)
Query: 40 SIARGDVAQLLSIGHLDRALLRVCPCHAFALPDTRRDSSANSSRRVLFLQAEQVIDEDNM 99
SIA DV QLL++ HLDRA+ R AEQVI EDNM
Sbjct: 38 SIATDDVRQLLTLDHLDRAIHR----------------------------AEQVIAEDNM 69
Query: 100 LEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDLPELLDARAILAD 159
LE +++E+YCK LIE A +LDKP EC +EI+EAAA +MFA+ C +LPELL AR ILAD
Sbjct: 70 LEAFEMIEMYCKRLIEHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILAD 129
Query: 160 KFGRDFAAAAKDGAHGVVDPTLVRKLSGAPASTEQKQRLTKVIAAENDILLEFPE 214
KFG DF AAKDG G+VDP LV KLS S E K+++TK IA EN+I+++F E
Sbjct: 130 KFGSDFTEAAKDGT-GIVDPMLVWKLSSDAKSMELKRKVTKEIAMENNIIVDFSE 183
>Os03g0257300
Length = 189
Score = 144 bits (362), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/175 (49%), Positives = 109/175 (62%), Gaps = 33/175 (18%)
Query: 40 SIARGDVAQLLSIGHLDRALLRVCPCHAFALPDTRRDSSANSSRRVLFLQAEQVIDEDNM 99
SIA DV QLL++GHLDRA+ R AEQVI E NM
Sbjct: 38 SIATDDVRQLLTLGHLDRAIHR----------------------------AEQVIGEGNM 69
Query: 100 LEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDLPELLDARAILAD 159
LE +++E+Y K LIE A +LDKP EC EEI+EAAA +M + CG+LPEL AR ILAD
Sbjct: 70 LEAFEMIEMYYKRLIENAAKLDKPGECTEEIREAAAAVMLVAGWCGELPELPFARTILAD 129
Query: 160 KFGRDFAAAAKDGAHGVVDPTLVRKLSGAPASTEQKQRLTKVIAAENDILLEFPE 214
KFG DFA AAKDG G+VDP + +L+ S E K+++TK IA EN+I+++F E
Sbjct: 130 KFGSDFAEAAKDGT-GIVDPMVFWQLN----SMELKKKVTKEIAMENNIVVDFSE 179
>Os03g0710000 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 355
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 29/168 (17%)
Query: 42 ARGDVAQLLSIGHLDRALLRVCPCHAFALPDTRRDSSANSSRRVLFLQAEQVIDEDNMLE 101
ARGDV QLL +GH DRALLR AEQVI E N L+
Sbjct: 44 ARGDVEQLLRLGHPDRALLR----------------------------AEQVIREQNTLD 75
Query: 102 VLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDLPELLDARAILADKF 161
++E YC ++ E+A +D +EC EE++EAAAGL++A+ARCGD+PEL + + ++A KF
Sbjct: 76 AFLMLESYCNLITERAALVDSHRECPEELREAAAGLIYAAARCGDVPELQEVKRLMAAKF 135
Query: 162 GRDFAAAAKDGAHGV-VDPTLVRKLSGAPASTEQKQRLTKVIAAENDI 208
GR+F ++A + G ++ +V+KLS S E +Q + + IAAE I
Sbjct: 136 GREFVSSAAELRSGCGINAKIVQKLSTKQPSLESRQMVLQEIAAEKGI 183
>Os01g0687700 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 319
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 88 LQAEQVIDEDNMLEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDL 147
++ E +I E N+L +IVEL+C+ ++ + ++ KEC E++EA A ++FAS RC DL
Sbjct: 60 IRVEHIIREQNILAAYEIVELFCEFVLARVPIVEVQKECPFELREAIASIIFASGRCSDL 119
Query: 148 PELLDARAILADKFGRDFAAAAKDG-AHGVVDPTLVRKLSGAPASTEQKQRLTKVIAAEN 206
PEL+ R + K+G++F AAA + V+ T++ KLS S E K ++ K IA E
Sbjct: 120 PELMHLRTLFTTKYGKEFVAAAMELRPDSGVNRTIIEKLSVKAPSAESKLKVLKAIAQEY 179
Query: 207 DILLEFPENTGDTDQGKQNE 226
LE+ + + + K+ E
Sbjct: 180 G--LEWDSSNTEAELNKKYE 197
>Os01g0706400 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 1101
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Query: 88 LQAEQVIDEDNMLEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDL 147
++ E VI E+ ++ D++E+YC++++ + + +D K C ++KEA A ++FAS RC D+
Sbjct: 64 IRVEHVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTCPIDLKEAIASVIFASMRCSDV 123
Query: 148 PELLDARAILADKFGRDFAAAAKD-GAHGVVDPTLVRKLSGAPASTEQKQRLTKVIAAEN 206
EL D R K+G++FAAAA + V ++ KLS T+ K + IA E+
Sbjct: 124 TELADVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIEKLSAGAPDTQTKIKTLTSIAEEH 183
Query: 207 DILLE 211
+I E
Sbjct: 184 NIKWE 188
>Os09g0547200 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 476
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 88 LQAEQVIDEDNMLEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDL 147
++ E VI E N++ +I++L+C++++ + + K KEC ++KE L+FA+ RC +L
Sbjct: 79 IRVEHVIREQNIMAANEIIDLFCELIVTRLPIIAKQKECPADLKEGICSLIFAAPRCSEL 138
Query: 148 PELLDARAILADKFGRDFAAAAKD-GAHGVVDPTLVRKLSGAPASTEQKQRLTKVIAAEN 206
PEL R + K+G+DF +AA D V+ L+ KLS S + K ++ K IA E+
Sbjct: 139 PELGRIRDLFEKKYGKDFVSAAVDLRPDACVNNLLIEKLSVKKPSGQTKLKILKEIAKEH 198
Query: 207 DILLEFPEN 215
I + E
Sbjct: 199 QIDWDMTET 207
>Os08g0175200 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 561
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 88 LQAEQVIDEDNMLEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGDL 147
++ E +I E+NM+ +I+EL+C+++ + ++ KEC ++KEA + + FA+ RC DL
Sbjct: 64 IRVEHIIREENMMAAQEILELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADL 123
Query: 148 PELLDARAILADKFGRDFAAAAKDGAHGV-VDPTLVRKLSGAPASTEQKQRLTKVIAAEN 206
PEL+ + + A K+G++F AAA + V+ ++ LS + K +L K IA E+
Sbjct: 124 PELMQVQMMFATKYGKEFVAAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEH 183
Query: 207 DI 208
+I
Sbjct: 184 EI 185
>Os02g0159200 Protein of unknown function DUF292, eukaryotic domain containing
protein
Length = 675
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 87 FLQAEQVIDEDNMLEVLDIVELYCKILIEQATQLDKPKECGEEIKEAAAGLMFASARCGD 146
F + E +I E N D++E YC+ +++Q L K EC +E EA + L+FA+AR +
Sbjct: 56 FGRMEALIVEMNQASCYDMIEQYCEYIVKQLNNLQKQNECPQEALEAVSTLIFATARFPE 115
Query: 147 LPELLDARAILADKFGRDFAAAAKDGAHGVVDPTLVRKLSGAPASTEQKQRLTKVIAAE- 205
LPEL D R + +++G V V+KL + E+K ++ + IA E
Sbjct: 116 LPELCDLRHMFTERYG--------SFVEPFVSSEFVQKLQNKSFTNEEKLQVMQSIAEEF 167
Query: 206 ----NDILLE-----FPENTGDTDQGKQNEQARNVRAEQFVEQNEVKREHHEVQGRQRFV 256
N LE P+N D Q K + + V A NE+K + H V R+ V
Sbjct: 168 SVPFNSKALERKISGVPQNKHDL-QNKSSFKRVEVEASAC---NELKVDRHAVHERKSKV 223
Query: 257 DEEVN 261
EV+
Sbjct: 224 TPEVH 228
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,874,865
Number of extensions: 781076
Number of successful extensions: 1915
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1905
Number of HSP's successfully gapped: 9
Length of query: 568
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 462
Effective length of database: 11,501,117
Effective search space: 5313516054
Effective search space used: 5313516054
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 159 (65.9 bits)