Os03g0257600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
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Os03g0257600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.02 | 0.649 | 10.2 | -2.03 | 1.15 | 2.24 | 1.73 | 7.52 | 0.956 | 23.1 | 2.387 | 5810 | -- | -- |
| 251.01 | 0.744 | 10.1 | -0.82 | 0.0315 | 1.07 | -1.99 | -- | 0.948 | 10.6 | 2.387 | 5810 | -- | -- |
| 197.23 | 0.654 | 10.1 | -2.41 | 1.06 | 1.52 | -- | 8.12 | 0.857 | 22.8 | 4.825 | 5929 | -- | -- |
| 262.34 | 0.754 | 10 | -1.19 | 1.15 | 0.849 | -- | -- | 1.09 | 23.4 | 12.99 | 17427 | -- | -- |
| 246.71 | 0.732 | 10.1 | -2.1 | -- | 2.94 | -- | 9.17 | 0.988 | -- | 2.309 | 5973 | -- | -- |
| 279.13 | 0.783 | 10.1 | -0.863 | 1.2 | -- | 2 | -- | 0.913 | 23 | -- | -- | -- | -- |
| 296.1 | 0.806 | 10.1 | -0.945 | 1.19 | -- | -- | -- | 0.905 | 23.1 | -- | -- | -- | -- |
| 266.41 | 0.764 | 10.1 | -0.937 | -- | 1.07 | -- | -- | 0.962 | -- | 5.186 | 24766 | -- | -- |
| 262.78 | 0.755 | 10 | -- | 1.18 | 0.834 | -- | -- | 1.19 | 22.9 | 3.913 | 18748 | -- | -- |
| 384.7 | 0.916 | 10.1 | -0.917 | -- | -- | -- | -- | 0.915 | -- | -- | -- | -- | -- |
| 319.64 | 0.836 | 10.1 | -- | 1.18 | -- | -- | -- | 1.01 | 23 | -- | -- | -- | -- |
| 288.57 | 0.794 | 10 | -- | -- | 1.05 | -- | -- | 1.05 | -- | 2.77 | 47520 | -- | -- |
| 406.9 | 0.942 | 10 | -- | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.47 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 7 | 181.56 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 9 | 181.64 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 16 | 183.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 18 | 183.42 | humidity | 80 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 28 | 184.13 | humidity | 90 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 30 | 184.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 45 | 184.94 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 58 | 185.19 | humidity | 80 | 14400 | > th | dose independent | sin | 14 | NA |
| 69 | 185.51 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 77 | 185.69 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 96 | 186.01 | radiation | 40 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 104 | 186.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 106 | 186.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 109 | 186.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 125 | 186.36 | humidity | 80 | 14400 | < th | dose independent | sin | 14 | NA |
| 126 | 186.37 | radiation | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 131 | 186.50 | radiation | 1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 156 | 186.83 | temperature | 30 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 169 | 186.97 | temperature | 30 | 14400 | < th | dose independent | sin | 7 | NA |
| 186 | 187.16 | humidity | 80 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 198 | 187.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 201 | 187.43 | temperature | 30 | 14400 | > th | dose independent | sin | 7 | NA |
| 207 | 187.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 211 | 187.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 212 | 187.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 228 | 187.61 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 247 | 187.67 | radiation | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 251 | 187.73 | temperature | 25 | 14400 | > th | dose dependent | sin | 8 | NA |
| 259 | 187.81 | temperature | 30 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 313 | 188.02 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 330 | 188.03 | radiation | 20 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 430 | 188.36 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 543 | 188.65 | humidity | 70 | 43200 | > th | dose dependent | rect. | 9 | 20 |
| 594 | 188.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 617 | 188.92 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 621 | 188.94 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 632 | 189.04 | humidity | 70 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 654 | 189.18 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 666 | 189.25 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 697 | 189.26 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 715 | 189.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 748 | 189.27 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 758 | 189.27 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 821 | 189.49 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 913 | 189.52 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 939 | 189.60 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 1 |