Os01g0687700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0687700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.3 | 0.151 | 10.5 | 0.404 | 0.603 | -0.282 | -0.495 | -0.839 | 0.0321 | 22.9 | 24.8 | 1544 | -- | -- |
| 11.73 | 0.16 | 10.5 | 0.264 | 0.615 | -0.223 | -0.389 | -- | 0.0124 | 22.6 | 23.98 | 2858 | -- | -- |
| 11.31 | 0.157 | 10.5 | 0.424 | 0.606 | -0.28 | -- | -0.833 | 0.0338 | 23 | 24.79 | 1621 | -- | -- |
| 12.05 | 0.162 | 10.5 | 0.151 | 0.6 | -0.366 | -- | -- | -0.04 | 22.8 | 24.65 | 2992 | -- | -- |
| 27.77 | 0.245 | 10.5 | 0.371 | -- | -0.372 | -- | -0.198 | 0.0373 | -- | 24.7 | 774 | -- | -- |
| 14.4 | 0.178 | 10.5 | 0.264 | 0.606 | -- | -0.483 | -- | 0.0659 | 22.9 | -- | -- | -- | -- |
| 15.38 | 0.184 | 10.5 | 0.283 | 0.608 | -- | -- | -- | 0.0674 | 23 | -- | -- | -- | -- |
| 25.06 | 0.233 | 10.5 | 0.149 | -- | -0.588 | -- | -- | -0.129 | -- | 25.1 | 820 | -- | -- |
| 12.57 | 0.165 | 10.5 | -- | 0.598 | -0.391 | -- | -- | -0.071 | 22.8 | 24.4 | 3009 | -- | -- |
| 38.39 | 0.29 | 10.5 | 0.297 | -- | -- | -- | -- | 0.0719 | -- | -- | -- | -- | -- |
| 17.5 | 0.196 | 10.5 | -- | 0.611 | -- | -- | -- | 0.0359 | 23 | -- | -- | -- | -- |
| 25.32 | 0.234 | 10.5 | -- | -- | -0.562 | -- | -- | -0.152 | -- | 24.8 | 789 | -- | -- |
| 40.71 | 0.298 | 10.5 | -- | -- | -- | -- | -- | 0.0389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 2 | 9.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 4 | 9.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 6 | 9.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 16 | 10.01 | temperature | 20 | 10 | > th | dose dependent | sin | 11 | NA |
| 38 | 10.04 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 41 | 10.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 122 | 10.11 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 170 | 10.14 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 180 | 10.15 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 209 | 10.17 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 306 | 10.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 309 | 10.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 311 | 10.22 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 334 | 10.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 335 | 10.23 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 362 | 10.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 486 | 10.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 597 | 10.34 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 712 | 10.39 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 13 |
| 887 | 10.44 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |