Os08g0175200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
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Os08g0175200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.75 | 0.209 | 12.2 | 0.852 | 0.157 | -0.271 | -0.452 | 4.1 | 0.0572 | 17.8 | 25.8 | 734 | -- | -- |
| 22.63 | 0.222 | 12.2 | 0.291 | 0.0166 | 0.281 | -0.506 | -- | -0.0815 | 12.8 | 28.99 | 567 | -- | -- |
| 20.06 | 0.209 | 12.2 | 0.9 | 0.166 | -0.334 | -- | 4.3 | 0.05 | 18.1 | 26.5 | 816 | -- | -- |
| 22.13 | 0.219 | 12.2 | 0.229 | 0.0439 | 0.301 | -- | -- | -0.0574 | 14 | 30.22 | 605 | -- | -- |
| 21.06 | 0.214 | 12.2 | 0.716 | -- | -0.191 | -- | 4.2 | 0.00483 | -- | 27.33 | 696 | -- | -- |
| 23.65 | 0.228 | 12.3 | 0.253 | 0.13 | -- | 0.0429 | -- | -0.0827 | 18.1 | -- | -- | -- | -- |
| 23.66 | 0.228 | 12.3 | 0.253 | 0.131 | -- | -- | -- | -0.0824 | 17.9 | -- | -- | -- | -- |
| 22.19 | 0.219 | 12.2 | 0.214 | -- | 0.316 | -- | -- | -0.0594 | -- | 29.9 | 587 | -- | -- |
| 23.3 | 0.225 | 12.3 | -- | 0.0435 | 0.318 | -- | -- | -0.0814 | 16.6 | 30 | 605 | -- | -- |
| 24.54 | 0.231 | 12.3 | 0.249 | -- | -- | -- | -- | -0.0855 | -- | -- | -- | -- | -- |
| 25.34 | 0.235 | 12.3 | -- | 0.127 | -- | -- | -- | -0.111 | 18 | -- | -- | -- | -- |
| 23.38 | 0.225 | 12.3 | -- | -- | 0.341 | -- | -- | -0.0813 | -- | 29.9 | 594 | -- | -- |
| 26.18 | 0.239 | 12.3 | -- | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 11 |
| 4 | 19.81 | temperature | 25 | 720 | > th | dose dependent | rect. | 2 | 19 |
| 8 | 19.82 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 27 | 19.83 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 33 | 19.84 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 41 | 19.85 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 49 | 19.87 | temperature | 25 | 720 | > th | dose dependent | sin | 21 | NA |
| 51 | 19.87 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 75 | 19.88 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 94 | 19.88 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 100 | 19.90 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 115 | 19.91 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 124 | 19.92 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 232 | 20.15 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 248 | 20.19 | temperature | 20 | 90 | > th | dose dependent | sin | 14 | NA |
| 250 | 20.19 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 274 | 20.24 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 279 | 20.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 282 | 20.25 | temperature | 20 | 10 | > th | dose dependent | sin | 14 | NA |
| 359 | 20.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 389 | 20.37 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 434 | 20.41 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 7 |
| 498 | 20.44 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 8 |
| 521 | 20.45 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 541 | 20.46 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 3 |
| 583 | 20.47 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 584 | 20.47 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 16 |
| 619 | 20.49 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 620 | 20.49 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 637 | 20.49 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 639 | 20.50 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 642 | 20.50 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 691 | 20.52 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 705 | 20.53 | temperature | 30 | 720 | > th | dose independent | sin | 6 | NA |
| 709 | 20.53 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 733 | 20.54 | temperature | 30 | 720 | < th | dose independent | sin | 6 | NA |
| 760 | 20.55 | temperature | 15 | 4320 | > th | dose dependent | sin | 15 | NA |