BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0175200 Os08g0175200|AK072367
(561 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G34220.1 | chr1:12463102-12465911 REVERSE LENGTH=650 308 4e-84
AT4G35730.1 | chr4:16931111-16933241 FORWARD LENGTH=467 230 1e-60
AT1G25420.1 | chr1:8916141-8917980 FORWARD LENGTH=324 220 2e-57
AT2G19710.1 | chr2:8506339-8509817 FORWARD LENGTH=938 181 1e-45
AT4G29440.1 | chr4:14473942-14477721 REVERSE LENGTH=1091 166 3e-41
AT1G13340.1 | chr1:4569622-4571043 REVERSE LENGTH=410 112 5e-25
AT2G14830.1 | chr2:6362524-6365818 FORWARD LENGTH=455 108 1e-23
AT1G79910.1 | chr1:30055050-30057011 FORWARD LENGTH=382 97 2e-20
AT1G52315.1 | chr1:19481212-19482674 FORWARD LENGTH=348 87 3e-17
AT4G32350.1 | chr4:15617634-15620642 FORWARD LENGTH=733 80 2e-15
AT1G51900.1 | chr1:19279884-19282895 REVERSE LENGTH=775 59 9e-09
AT3G15490.1 | chr3:5229785-5230646 FORWARD LENGTH=212 53 4e-07
>AT1G34220.1 | chr1:12463102-12465911 REVERSE LENGTH=650
Length = 649
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 194/281 (69%), Gaps = 39/281 (13%)
Query: 23 TLLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEIL 82
TLLKL+IPRIK +IAKLLE GQEATARIRVEHIIREE MMAAQEIL
Sbjct: 19 TLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVEHIIREEKMMAAQEIL 78
Query: 83 ELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFV 142
ELFCELIAVRLPIIE Q+ECP+DLKEAISS+CFAAPRC+DL EL QVQ++F +KYGKEFV
Sbjct: 79 ELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQQVQILFVSKYGKEFV 138
Query: 143 AAATELMPDCGVNR------------------------------QIIELLSIRAPPVDVK 172
AAA+EL PD GVNR Q++ELLS+RAP + K
Sbjct: 139 AAASELKPDSGVNRKTESLIFIAWFSLVETRDLFMFLYFSNSILQLVELLSVRAPSPETK 198
Query: 173 MKLLKEIAEEHEIDWDPSATETEYLKPHEDLLNGPTYF-NGSTLPLPKEKHEET--LAAS 229
+KLLKEIAEEHE+DWDP++TET+ K HEDLL+GP F GS LPLP+E++E+T + S
Sbjct: 199 LKLLKEIAEEHELDWDPASTETDLFKSHEDLLDGPKQFGGGSKLPLPEEQNEKTNLTSLS 258
Query: 230 AAEHPDEDYESDTGLESLDLPEVPKAAIRPPSDTPATPDID 270
AA+ E +SD+ + LD PEVP +RP TP ++
Sbjct: 259 AAK---EKSDSDSEYDILDFPEVPNVLLRP---TPGATSVN 293
>AT4G35730.1 | chr4:16931111-16933241 FORWARD LENGTH=467
Length = 466
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
Query: 23 TLLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEIL 82
T K+++ RIK DIA LL++GQ+ATARIRVEH+IRE+N+ AA EI+
Sbjct: 33 TAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVIREQNIQAANEII 92
Query: 83 ELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFV 142
ELFCELI RL II QK+CP+DLKE I+S+ FAAPRC+++PEL ++ +FA KYGK+FV
Sbjct: 93 ELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLRDIFAKKYGKDFV 152
Query: 143 AAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDPSATETEYLKPHED 202
+AAT+L P CGVNR +I+ LS+R P + K+K++KEIA+E ++DWD + TE E LKP E+
Sbjct: 153 SAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDTTETEQELLKPQEE 212
Query: 203 LLNGPTYF-NGSTLPLPK 219
++GP F + S+LP+ +
Sbjct: 213 SIDGPRKFVSASSLPVNR 230
>AT1G25420.1 | chr1:8916141-8917980 FORWARD LENGTH=324
Length = 323
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 135/184 (73%)
Query: 23 TLLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEIL 82
T L L+I R+K +IA L+AGQE ARIRVEH+IRE N+ AA EIL
Sbjct: 19 TSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVEHVIREMNLWAAYEIL 78
Query: 83 ELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFV 142
ELFCE I R+PI+E++KECP +L+EAI+SI FAAPRC+++P+L+Q++ +F TKYGKEF+
Sbjct: 79 ELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLLQIKNLFGTKYGKEFI 138
Query: 143 AAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDPSATETEYLKPHED 202
A+EL PD GVNR IIE LS +P ++K+LKEIA+E+ ++WD SATE E++K HED
Sbjct: 139 MVASELRPDSGVNRTIIEKLSPTSPSGAARLKMLKEIAQEYSLNWDSSATEAEFMKSHED 198
Query: 203 LLNG 206
LL G
Sbjct: 199 LLGG 202
>AT2G19710.1 | chr2:8506339-8509817 FORWARD LENGTH=938
Length = 937
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 17/196 (8%)
Query: 23 TLLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEIL 82
T L+++ R+K ++A+LLE+GQ TARIRVEH++REE +AA E++
Sbjct: 16 TALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVVREEKTVAAYELI 75
Query: 83 ELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFV 142
++CEL+ VRL +IE+QK CPIDLKEA++S+ FA+ R +D+PEL ++ F TKYGK+F
Sbjct: 76 GIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTTKYGKDFS 135
Query: 143 AAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDW--------DPSATET 194
+A EL PD GV+R ++E LS +AP K+K+L IAEEH + W DP TE
Sbjct: 136 TSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEHNVVWEAQSFVESDPKDTE- 194
Query: 195 EYLKPHEDLLNGPTYF 210
LLNG F
Sbjct: 195 --------LLNGANSF 202
>AT4G29440.1 | chr4:14473942-14477721 REVERSE LENGTH=1091
Length = 1090
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 110/164 (67%)
Query: 25 LKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEILEL 84
L+++ R+K ++A LLE+GQ TA+IRVEH++REE +AA E++ +
Sbjct: 18 LQMAASRLKILKNKKDTQIKQLRRELAHLLESGQTQTAKIRVEHVVREEKTVAAYELVGI 77
Query: 85 FCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFVAA 144
+CEL+ RL +I++QK CP DLKEA++S+ +A+ R D+ EL + F+ KYGK+FV+A
Sbjct: 78 YCELLVARLGVIDSQKTCPNDLKEAVASVLYASQRLTDVGELSDIVKHFSAKYGKDFVSA 137
Query: 145 ATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWD 188
A L PD GV+R ++E LS++AP K+K+L EIA +H + W+
Sbjct: 138 AIGLQPDSGVSRLLVEKLSVKAPDGPTKIKILTEIATQHNVTWE 181
>AT1G13340.1 | chr1:4569622-4571043 REVERSE LENGTH=410
Length = 409
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Query: 23 TLLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEIL 82
+L+ L++ R+ D+ +LL+ GQ A RV+ +++++N + +
Sbjct: 20 SLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAYHRVDQVVKDQNTLDVLFFI 79
Query: 83 ELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFV 142
+ L R+ + E ++CP +L EA+S + FAA R + PEL +++ + +++GK+
Sbjct: 80 HGYFTLCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEFPELQEIRNVLISRFGKDLA 139
Query: 143 AAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEI--DWDPSATETE 195
A + EL +CGV+ +II+ LS R PP +V+MK LKEIA E+ I D ++T TE
Sbjct: 140 ARSIELRSNCGVDPKIIQKLSTRPPPKEVRMKALKEIAAENNIVLKLDQASTSTE 194
>AT2G14830.1 | chr2:6362524-6365818 FORWARD LENGTH=455
Length = 454
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%)
Query: 49 DIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIETQKECPIDLKE 108
DIA+LL G+ A R + + +EN+M+ +L F ++I + L I +++ P + E
Sbjct: 112 DIAQLLRIGERDRALHRAQQLFLDENLMSLYHLLLHFSDIILLNLSYIRRRRDLPDGINE 171
Query: 109 AISSICFAAPRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNRQIIELLSIRAPP 168
A+S++ FA+ RC DLPEL ++++F +YG FV A L+P VN Q+IE LSI +
Sbjct: 172 AVSTLVFASARCGDLPELRALRVLFGKRYGNHFVDTALNLLPGNCVNPQVIEKLSIISVS 231
Query: 169 VDVKMKLLKEIAEEHEIDWDPSATE 193
D K KLL EI EE+ + + A E
Sbjct: 232 DDAKSKLLGEIVEEYNLRLEVLAIE 256
>AT1G79910.1 | chr1:30055050-30057011 FORWARD LENGTH=382
Length = 381
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 23 TLLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEIL 82
+L+K++ R+ DI LL+ + A R E +I E+ +A E L
Sbjct: 16 SLVKITKTRVDTVKRKKNSVCKYLKNDIVDLLKNSLDYNAYGRAEGLIEEKRRLACYEFL 75
Query: 83 ELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFV 142
E FC +A + +++ CP + +EAISS+ +AA R +++PEL ++ +FA +YG
Sbjct: 76 EQFCNCVASNVSLLQKSIRCPDECREAISSLVYAAARVSEVPELRDLRSLFAERYGNTL- 134
Query: 143 AAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDPSATE 193
D VN + +E P ++K++LL+EIA E+ I WD + E
Sbjct: 135 --------DQFVNPEFVERFKAEPPSKEMKVELLQEIAREYSIKWDAKSLE 177
>AT1G52315.1 | chr1:19481212-19482674 FORWARD LENGTH=348
Length = 347
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 96/173 (55%), Gaps = 16/173 (9%)
Query: 49 DIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIETQKECPIDLKE 108
DI L+ GQ++ A R E ++ E +++ +++E FC+ I+ L ++ ++ECP + +E
Sbjct: 42 DIVNFLKNGQDSEAYRRAELLLEELRIISCYDLIERFCDCISENLSLMLKKRECPEECRE 101
Query: 109 AISSICFAAPRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNRQIIELLSIRAPP 168
A+SS+ +A D+PEL ++ +F ++G F+A++ VN +++E + PP
Sbjct: 102 AVSSLIYATAWVPDVPELKDLRAVFTKRFG-NFIASS--------VNHELVEKTELLRPP 152
Query: 169 -VDVKMKLLKEIAEEHEIDWDPS------ATETEYLKPHEDLLNGPTYFNGST 214
++K++ +K++A E I+WDP+ ET L+ + + Y N T
Sbjct: 153 SRELKIQTVKDVANEFSINWDPTPLKLMLLRETSALQIKDKVETRADYLNKDT 205
>AT4G32350.1 | chr4:15617634-15620642 FORWARD LENGTH=733
Length = 732
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 24 LLKLSIPRIKXXXXXXXXXXXXXXXDIAKLLEAGQEATARIRVEHIIREENMMAAQEILE 83
L+KL+ RI D+A L+ G + A R ++ E + + + +E
Sbjct: 17 LIKLTKNRIDVLRRKRNATIKFLKRDLADLIINGHDYNAFSRAGGLLDELRYLWSLDFVE 76
Query: 84 LFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFVA 143
C+ + +L ++ ECP D +EAISS+ FAA ++LPEL +++ MF KY
Sbjct: 77 QTCDFVYKQLSTMQKTPECPEDCREAISSLMFAASGFSELPELRELRQMFHEKYTDSLA- 135
Query: 144 AATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDPSATETEYLK 198
VN++++E +S + ++ K+KL++++A E I WD E ++
Sbjct: 136 --------LFVNQELVENMSSKPFSMEKKVKLMEDVALEFSIRWDSKDFEKRIVR 182
>AT1G51900.1 | chr1:19279884-19282895 REVERSE LENGTH=775
Length = 774
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 49 DIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIETQKECPI---D 105
DI + + +A R E ++ EN + L F + I +R + C + D
Sbjct: 44 DIVDFIRSNDSKSALFRTEQLLLVENAITIYGFLLKFTDFILLRFSP-SKKHSCLLVNDD 102
Query: 106 LKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNRQIIELLSIR 165
EA+SS+ FA+ +C ++PEL+ + + +YG+ +V A ++ P VN +I E L
Sbjct: 103 TSEAVSSLIFASVKCREIPELLIISELVGQRYGQRYVTTAIQVPPGNLVNTEIKEKLKST 162
Query: 166 APPVDV-KMKLLKEIAEE 182
+ + K ++++EIA+E
Sbjct: 163 SVVSETDKCRVMEEIAKE 180
>AT3G15490.1 | chr3:5229785-5230646 FORWARD LENGTH=212
Length = 211
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 49 DIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIETQK-ECPIDL- 106
DIA+LL G+ + A + + +E ++A + +ELFC I L I + K E +DL
Sbjct: 8 DIAQLLSYGRYSEALPKAKQFYEDERRLSAYDQVELFCTTI---LQNISSLKYENNVDLL 64
Query: 107 ----KEAISSICFAAPRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNRQIIELL 162
K+A++ I FAA R +L +L ++ F ++G +F +L V +I+++L
Sbjct: 65 PEETKKAMAGIIFAASRIGELEDLQHIRSFFVQRFGLKFDKECVDLRQGNVVGFEIVKIL 124
Query: 163 S 163
+
Sbjct: 125 N 125
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,951,237
Number of extensions: 457876
Number of successful extensions: 1484
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1479
Number of HSP's successfully gapped: 13
Length of query: 561
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 457
Effective length of database: 8,255,305
Effective search space: 3772674385
Effective search space used: 3772674385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 114 (48.5 bits)