Os02g0159200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
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Os02g0159200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF292, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.31 | 0.513 | 11.4 | -3.85 | 3.28 | 1.14 | 0.777 | -3.46 | -0.941 | 6.46 | 25.85 | 1260 | -- | -- |
| 124.35 | 0.519 | 11.3 | -3.03 | 3.31 | 0.917 | 0.568 | -- | -0.823 | 6.4 | 25.4 | 1276 | -- | -- |
| 120.78 | 0.512 | 11.4 | -3.84 | 3.28 | 1.14 | -- | -3.49 | -0.936 | 6.44 | 25.94 | 1259 | -- | -- |
| 123.77 | 0.518 | 11.2 | -2.95 | 3.28 | 0.741 | -- | -- | -0.669 | 6.4 | 27.6 | 1291 | -- | -- |
| 672.01 | 1.21 | 11.4 | -3.66 | -- | 1.3 | -- | -2.38 | -0.967 | -- | 24.1 | 1314 | -- | -- |
| 146.97 | 0.568 | 11.2 | -2.73 | 3.3 | -- | 0.786 | -- | -0.685 | 6.3 | -- | -- | -- | -- |
| 148.48 | 0.571 | 11.2 | -2.72 | 3.31 | -- | -- | -- | -0.687 | 6.28 | -- | -- | -- | -- |
| 674.2 | 1.21 | 11.3 | -2.99 | -- | 1.06 | -- | -- | -0.777 | -- | 24.3 | 1324 | -- | -- |
| 337.97 | 0.856 | 11.2 | -- | 3.24 | 0.346 | -- | -- | -0.322 | 6.38 | 33.81 | 1111 | -- | -- |
| 716.55 | 1.25 | 11.3 | -2.63 | -- | -- | -- | -- | -0.616 | -- | -- | -- | -- | -- |
| 343.87 | 0.867 | 11.2 | -- | 3.27 | -- | -- | -- | -0.384 | 6.33 | -- | -- | -- | -- |
| 795.08 | 1.31 | 11.1 | -- | -- | -1.64 | -- | -- | 0.169 | -- | 10.4 | 47520 | -- | -- |
| 899.53 | 1.4 | 11.2 | -- | -- | -- | -- | -- | -0.324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.99 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 2 | 118.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 3 | 118.54 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 4 | 118.57 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 7 | 118.60 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 20 |
| 14 | 118.64 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 15 | 118.64 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 21 |
| 33 | 118.75 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 20 |
| 44 | 118.78 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 17 |
| 66 | 118.85 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 74 | 118.88 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 83 | 118.90 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 97 | 118.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 15 |
| 141 | 119.03 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 172 | 119.10 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 184 | 119.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 190 | 119.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 219 | 119.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 274 | 119.34 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 279 | 119.35 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 296 | 119.39 | wind | 5 | 43200 | > th | dose independent | sin | 15 | NA |
| 315 | 119.43 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 330 | 119.46 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 332 | 119.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 348 | 119.50 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 359 | 119.52 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 398 | 119.64 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 413 | 119.67 | wind | 5 | 43200 | < th | dose independent | sin | 15 | NA |
| 458 | 119.77 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 459 | 119.77 | humidity | 60 | 90 | > th | dose independent | rect. | 13 | 14 |
| 478 | 119.85 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 687 | 120.35 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 697 | 120.36 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 719 | 120.40 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 729 | 120.43 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 884 | 120.65 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 928 | 120.71 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |