BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0243700 Os03g0243700|AK059149
(401 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0243700 Glycoside hydrolase, family 10 protein 805 0.0
Os05g0304900 Glycoside hydrolase, family 10 protein 517 e-147
Os03g0201901 Glycoside hydrolase, family 10 protein 355 5e-98
Os03g0201800 Similar to Tapetum specific protein (Tapetum-s... 328 4e-90
Os10g0351600 Similar to Tapetum specific protein (Tapetum-s... 324 6e-89
Os03g0201400 Glycoside hydrolase, family 10 protein 321 6e-88
Os10g0351700 Similar to Tapetum specific protein (Tapetum-s... 319 2e-87
Os03g0672900 Similar to RXF12 protein (Xylan endohydrolase)... 271 6e-73
Os01g0134900 Similar to (1,4)-beta-xylan endohydrolase, iso... 257 1e-68
Os01g0134800 Similar to (1,4)-beta-xylan endohydrolase, iso... 253 2e-67
Os07g0456700 Similar to (1,4)-beta-xylan endohydrolase (EC ... 252 4e-67
Os05g0319900 Similar to (1,4)-beta-xylan endohydrolase, iso... 236 3e-62
Os05g0298700 Similar to Xylan endohydrolase isoenzyme X-I (... 101 8e-22
AK108856 91 1e-18
AK110530 86 6e-17
>Os03g0243700 Glycoside hydrolase, family 10 protein
Length = 401
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/401 (96%), Positives = 386/401 (96%)
Query: 1 MKITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAKDF 60
MKITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVAD TAKDF
Sbjct: 1 MKITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADQQGGRVVGASVSVRQTAKDF 60
Query: 61 PFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSH 120
PFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSH
Sbjct: 61 PFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSH 120
Query: 121 RVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHY 180
RVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHY
Sbjct: 121 RVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHY 180
Query: 181 NFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGG 240
NFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGG
Sbjct: 181 NFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGG 240
Query: 241 AVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLRE 300
AVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLRE
Sbjct: 241 AVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLRE 300
Query: 301 AYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHG 360
AYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHG
Sbjct: 301 AYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHG 360
Query: 361 AYSFSGFLGEYIVSVTYANSTSQATFSLSPGDETRHINIQI 401
AYSFSGFLGEYIVSVTYANSTSQATFSLSPGDETRHINIQI
Sbjct: 361 AYSFSGFLGEYIVSVTYANSTSQATFSLSPGDETRHINIQI 401
>Os05g0304900 Glycoside hydrolase, family 10 protein
Length = 480
Score = 517 bits (1332), Expect = e-147, Method: Compositional matrix adjust.
Identities = 234/400 (58%), Positives = 306/400 (76%), Gaps = 1/400 (0%)
Query: 3 ITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAKDFPF 62
I++ S SLQPF+ +QW+ H++D I+ RKR +HVAD +DFPF
Sbjct: 77 ISIRSASLQPFSPEQWNQHREDRIQLNRKRFVNVHVADSNGSRVVGAKVAVHQITRDFPF 136
Query: 63 GSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRV 122
GSAI+ TILGN+ YQ+WF RFNAAVFE+ELKWY+TEP G+ + V DQ+L FV+++
Sbjct: 137 GSAISRTILGNKLYQEWFNKRFNAAVFENELKWYATEPYPGKEDYTVADQLLQFVQANDA 196
Query: 123 MVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNF 182
+ RGHNIFWE+ TP+WVK L+ LRAAV+GRI++L++RY+G+F HWDV+NEMLH++F
Sbjct: 197 VARGHNIFWEDPKYTPAWVKNLTGSQLRAAVSGRIESLLSRYKGDFVHWDVSNEMLHFDF 256
Query: 183 YEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGGAV 242
YE RLG NA+V+FF A+ ADPLATLF+N+FNV+E CDD+SS+ D+YV++L+ L GG
Sbjct: 257 YENRLGGNATVDFFDTAKRADPLATLFLNDFNVVEVCDDLSSSADSYVSRLRQLADGGVT 316
Query: 243 LEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAY 302
EGIGLEGHF KPNIP +RAVLDKL TL LPIW TEIDIS+ +D +TQA YLE+VLRE +
Sbjct: 317 FEGIGLEGHFGKPNIPYVRAVLDKLGTLRLPIWLTEIDISSSFDPKTQAAYLEEVLREGF 376
Query: 303 SHPAVTGVMLWTALHPNG-CYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHGA 361
+HP+V G+MLWTA+ N CYQMCLT+ N NLP GDVVD+LL EWQT + G T+ G+
Sbjct: 377 AHPSVDGIMLWTAMDTNASCYQMCLTNQNFTNLPAGDVVDKLLGEWQTKETLGTTNDRGS 436
Query: 362 YSFSGFLGEYIVSVTYANSTSQATFSLSPGDETRHINIQI 401
++FS FLGEY +SVTY N T++ TFSL+ D+T+HINI++
Sbjct: 437 FNFSAFLGEYKLSVTYLNLTAEGTFSLAHSDDTKHINIRL 476
>Os03g0201901 Glycoside hydrolase, family 10 protein
Length = 412
Score = 355 bits (910), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 181/397 (45%), Positives = 235/397 (59%), Gaps = 8/397 (2%)
Query: 3 ITVASGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAKDFPF 62
I V + SLQPF+ ++WS H I+K RK+ + D FP
Sbjct: 11 IWVDNVSLQPFSREEWSAHHGAAIKKARKKTVRLQARDAAGNPVAGARMHIEHVRNGFPL 70
Query: 63 GSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRV 122
GSA++ IL N YQ+WF RF FE+E+KWYSTE + G+ + VPD ML F +SH +
Sbjct: 71 GSAMSKEILTNPGYQRWFTSRFTVTTFENEMKWYSTEAIPGREDYSVPDAMLRFAKSHGI 130
Query: 123 MVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNF 182
VRGHNIFW++ WVK LS + LR A RI+++M+RY G+ WDV NE LH++F
Sbjct: 131 AVRGHNIFWDDPSTQMGWVKALSGEQLRRATEKRIKSVMSRYSGQVIAWDVVNENLHFDF 190
Query: 183 YEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRA---- 238
+E R G AS F+ A D A + MNEFN +E D++ Y+ KL ++A
Sbjct: 191 FEGRFGWEASAAFYRKAHQMDGGALMSMNEFNTLEQPGDLTVLPGKYLRKLWQIKAFPGN 250
Query: 239 GGAVLEGIGLEGHF-LKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQV 297
G A GIGLEGHF +PNIP +RA LD +A PIW TEID++ D QA +LEQ+
Sbjct: 251 GNAARMGIGLEGHFSAQPNIPYIRAALDTMAQANAPIWLTEIDVAPGPD---QARHLEQI 307
Query: 298 LREAYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTD 357
LRE Y+HPAV G++LWTA HP GCY MCLTD N NLP GDVVD+L+ EW+T G D
Sbjct: 308 LREVYAHPAVHGIILWTAWHPQGCYVMCLTDNNFKNLPAGDVVDKLIWEWKTRSHVGVAD 367
Query: 358 AHGAYSFSGFLGEYIVSVTYANSTSQATFSLSPGDET 394
A G Y F G+Y V+VT+ + S SLS E+
Sbjct: 368 ADGYYETELFHGDYKVTVTHPAANSTVAQSLSVDRES 404
>Os03g0201800 Similar to Tapetum specific protein (Tapetum-specific endoxylanase)
Length = 582
Score = 328 bits (841), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/372 (42%), Positives = 218/372 (58%), Gaps = 7/372 (1%)
Query: 9 SLQPFTSDQWSMHQKDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAKDFPFGSAIAS 68
+LQPF+ D+W H+ ++++K R + I V K FP G+A+
Sbjct: 163 ALQPFSFDEWKGHRAESVKKERMKKVKITVVGPDGKPVPEADVSLERVGKGFPLGNAMTK 222
Query: 69 TILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHN 128
IL Y+KWF RF A E+E+KWYSTE + + V D+M+ H + +RGHN
Sbjct: 223 EILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHN 282
Query: 129 IFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQRLG 188
+FW++QD WV+ L +L+ A+ R+++++TRY G+ HWDV NE LH+NF+E +LG
Sbjct: 283 VFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEGKLG 342
Query: 189 ANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLR--AGGAVLE-G 245
+AS E F D LFMNEFN IE +D + YVAKLK +R G A L+ G
Sbjct: 343 KDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYG 402
Query: 246 IGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHP 305
IGLE HF PNIP MR +D LA +PIW TE+D+ + Q YL++V+RE ++HP
Sbjct: 403 IGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEVDVK---PCKNQVEYLDEVMREGFAHP 459
Query: 306 AVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHGAYSFS 365
AV G++LW A H GCY MC TD + NLPVGD +D+LL+EW G G TD+ G
Sbjct: 460 AVKGIVLWGAWHAKGCYVMCFTDNSFKNLPVGDAIDKLLKEWTAGH-TGKTDSKGVLEVE 518
Query: 366 GFLGEYIVSVTY 377
F GEY +V +
Sbjct: 519 IFHGEYNATVKH 530
>Os10g0351600 Similar to Tapetum specific protein (Tapetum-specific endoxylanase)
Length = 586
Score = 324 bits (831), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 230/397 (57%), Gaps = 11/397 (2%)
Query: 1 MKITVASGSLQPFTSDQWSMH--QKDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAK 58
+ I V S SLQPFT D+W H Q+ R RR + +
Sbjct: 177 VAIWVDSVSLQPFTFDEWDAHRQQQSAGRARRSTLGVVVARGTDGAPVPNATVTAELLRP 236
Query: 59 DFPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVR 118
FPFG+A+ IL N AY++WF RF A FE+E+KWY+TE G + VPD MLA
Sbjct: 237 GFPFGNAMTREILDNPAYEQWFASRFTVATFENEMKWYATEGRQGHEDYRVPDAMLALAE 296
Query: 119 SHRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRY-RGEFAHWDVNNEM 177
H V VRGHN+FW++Q +WV+ L PD+LRAA++ R++++++RY G WDV NE
Sbjct: 297 RHGVRVRGHNVFWDDQSTQMAWVRSLGPDELRAAMDKRLRSVVSRYGGGRVIGWDVVNEN 356
Query: 178 LHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLR 237
LH++FY+ +LG +AS + D LFMNEFN +E D+++ YVAK+ +R
Sbjct: 357 LHWSFYDGKLGPDASPAIYHQVGKIDGETPLFMNEFNTVEQPVDMAAMASKYVAKMNQIR 416
Query: 238 A---GGAVLEGIGLEGHF-LKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVY 293
+ G + +GLE HF PNIP MRA LD LA L LPIW TEID++N QA +
Sbjct: 417 SFPGNGGLKLAVGLESHFGATPNIPFMRATLDTLAQLKLPIWLTEIDVAN---GTNQAQH 473
Query: 294 LEQVLREAYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQ-A 352
LE+VLRE + HP V G+++W A H CY MCLTD NL VGDVVD+L+ EW+T A
Sbjct: 474 LEEVLREGHGHPNVDGMVMWAAWHATACYVMCLTDDEFKNLAVGDVVDKLIAEWRTHPVA 533
Query: 353 AGPTDAHGAYSFSGFLGEYIVSVTYANSTSQATFSLS 389
TDA G GEY V+VT+ + S A +L+
Sbjct: 534 VATTDADGVVELDLAHGEYNVTVTHPSLVSSAVRTLT 570
>Os03g0201400 Glycoside hydrolase, family 10 protein
Length = 339
Score = 321 bits (822), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/329 (48%), Positives = 215/329 (65%), Gaps = 10/329 (3%)
Query: 66 IASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVR 125
++ IL N +YQ+WF RF FE+E+KWYSTEP G+ + VPD ML F RSH + VR
Sbjct: 1 MSGEILRNPSYQRWFASRFTVTTFENEMKWYSTEPAPGREDYSVPDAMLEFARSHGIAVR 60
Query: 126 GHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQ 185
GHN+FW++ + P WV+GL L AA + RI++++ RY G+ WDV NE LH++F+E+
Sbjct: 61 GHNVFWDDPNQQPRWVQGLPYPQLLAAASRRIRSVVARYAGKLIAWDVVNENLHFSFFER 120
Query: 186 RLGANASVEFFSVAQDADPLATL-FMNEFNVIETCDDVSSTVDTYVAKLKDLRAG----G 240
R G +AS F++ A+ D +TL FMNE+N +E D+++ YV +LK + G G
Sbjct: 121 RFGWDASTAFYAAARMLDTGSTLMFMNEYNTLEQPGDMAALPARYVQRLKQIIGGYPQNG 180
Query: 241 AVLEGIGLEGHFLKP-NIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLR 299
A + IGLEGHF P NIP MRA LD LA G+P+W TE+D+ +QA YLE++LR
Sbjct: 181 AGM-AIGLEGHFTAPVNIPYMRAALDTLAQAGVPVWLTEVDVGG---GASQAYYLEEILR 236
Query: 300 EAYSHPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAH 359
EAY+HPAV GV+LW A P GCY MCLTD + NNLP GDVVDRL+ EW T AG TDA
Sbjct: 237 EAYAHPAVQGVILWAAWRPQGCYVMCLTDNDFNNLPQGDVVDRLITEWSTAPRAGTTDAE 296
Query: 360 GAYSFSGFLGEYIVSVTYANSTSQATFSL 388
G + GEY V+VT+ + + + S+
Sbjct: 297 GFFQAELAHGEYKVTVTHPSLNTSVSQSV 325
>Os10g0351700 Similar to Tapetum specific protein (Tapetum-specific endoxylanase)
Length = 578
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 235/403 (58%), Gaps = 11/403 (2%)
Query: 7 SGSLQPFTSDQWSMHQKDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAKDFPFGSAI 66
S SLQPFT D+W H++ + K R+ + V FPFG+A+
Sbjct: 179 SVSLQPFTFDEWDAHRQQSAAKVRRSTVRVVVRGADGAPMANATVIVELLRAGFPFGNAL 238
Query: 67 ASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRG 126
IL AY+KWF RF A FE+E+KWYS E + V D ML + + + +RG
Sbjct: 239 TKEILDLPAYEKWFTSRFTVATFENEMKWYSNEWAQNNEDYRVADAMLKLAQKYNIKIRG 298
Query: 127 HNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQR 186
HN+FW++Q++ WV L+ D L+AA+ R+++++TRY G+ HWDV NE LH+NF+E +
Sbjct: 299 HNVFWDDQNSQMKWVTPLNLDQLKAAMQKRLKSVVTRYAGKVIHWDVVNENLHFNFFETK 358
Query: 187 LGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRA--GGAVLE 244
LG NAS ++ D A LFMNEFN +E D + YVAK+K +++ G + L+
Sbjct: 359 LGPNASPMIYNQVGALDKNAILFMNEFNTLEQPGDPNPVPSKYVAKMKQIQSYPGNSALK 418
Query: 245 -GIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYS 303
G+GLE HF PNIP MR+ LD LA L LP+W TE+D+ Q +LEQVLRE Y+
Sbjct: 419 LGVGLESHFSTPNIPYMRSALDTLAQLKLPMWLTEVDV---VKGPNQVKFLEQVLREGYA 475
Query: 304 HPAVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHGAYS 363
HP+V G+++W A H GCY MCLTD + NLPVG +VD+L+ EW+T + A T A GA
Sbjct: 476 HPSVNGMIMWAAWHAKGCYVMCLTDNSFKNLPVGTLVDKLIAEWKTHKTAATTGADGAVE 535
Query: 364 FSGFLGEYIVSVTYANSTSQATFSLSPGDET-----RHINIQI 401
G+Y ++V++ + + AT D R +NI++
Sbjct: 536 LDLPHGDYNLTVSHPSLGTNATVRAMTVDAASLASERLVNIKV 578
>Os03g0672900 Similar to RXF12 protein (Xylan endohydrolase) (F19C14.2 protein)
Length = 756
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 210/354 (59%), Gaps = 16/354 (4%)
Query: 56 TAKDFPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLA 115
+ FP G+ I T + N+ Y +F FN AVF +ELKWY TEP GQL + D +L
Sbjct: 411 VSNSFPLGACIMRTNMDNEDYVDFFTKHFNWAVFGNELKWYWTEPEKGQLNYADADDLLK 470
Query: 116 FVRSHRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNN 175
H + VRGH IFWE A WVK L D+L AAV RI L+TRY+G+F H+DVNN
Sbjct: 471 LCADHGMCVRGHCIFWEVDSAVQQWVKALPADELSAAVASRINGLLTRYKGKFRHYDVNN 530
Query: 176 EMLHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKD 235
EMLH +FY+ +LGA A F A + DP A LF+N++NV C DV +T + Y+A++
Sbjct: 531 EMLHGSFYQDKLGAGARAAMFRAASELDPDALLFVNDYNVEGACVDVRATPEAYIAQVTG 590
Query: 236 LRAGGAVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLE 295
L+ GA + G+GL+GH P ++RA LD+LA LGLP+WFTE+D+S+ + +A LE
Sbjct: 591 LQEQGAAVGGVGLQGHVTAPVGAVVRAALDRLAVLGLPLWFTELDVSS-ANEHVRADDLE 649
Query: 296 QVLREAYSHPAVTGVMLWTALHPNGCYQMCLT--DWNLNNL--PVGDVVDRLLQ---EWQ 348
+LREAY+HPAV GV+LW G +++ ++ D +L + V + RLLQ EW
Sbjct: 650 AMLREAYAHPAVDGVVLW------GFWELSMSRDDAHLVDAEGEVNEAGRRLLQLKREWL 703
Query: 349 TGQAAGPTDAHGAYSFSGFLGEYIVS-VTYANSTSQATFSLSPGDETRHINIQI 401
T +A G D +G + F G G Y V VT A + F++ D +NI +
Sbjct: 704 T-RAHGRADGNGEFRFRGHHGAYHVDVVTPAGAKISQEFTVDKDDAPLVLNITV 756
>Os01g0134900 Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC
3.2.1.8) (Fragment)
Length = 371
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 191/334 (57%), Gaps = 4/334 (1%)
Query: 60 FPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRS 119
FPFG+ I ++ N A+ +F F+ AVFE+ELKWY TE GQL + D +L F
Sbjct: 32 FPFGACINGGVIQNPAFVDFFTKHFDWAVFENELKWYWTEAQQGQLNYADADALLDFCDR 91
Query: 120 HRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLH 179
+ VRGH IFW + W+KGL D L AAV GR+ L+TRY G F H+DVNNEMLH
Sbjct: 92 YGKPVRGHCIFWAVDNVVQQWIKGLDHDQLTAAVQGRLTGLLTRYAGRFPHYDVNNEMLH 151
Query: 180 YNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAG 239
+FY+ RLG + + F DP ATLF+N++NV E +D ++T + Y+ ++ L+
Sbjct: 152 GSFYQDRLGDDINAFMFRETARLDPGATLFVNDYNV-EGGNDPNATPEKYIEQITALQQK 210
Query: 240 GAVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLR 299
GA + GIGL+GH P ++ LDKLAT LP+W TE+D+ D +A LE VLR
Sbjct: 211 GAAVGGIGLQGHVTNPVGEVICDALDKLATTDLPVWLTELDVCES-DVDLRADDLEVVLR 269
Query: 300 EAYSHPAVTGVMLWTALHPNGCYQ-MCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDA 358
EAY+HPAV GVM W + + Q CL + + G+ L +EW T A G D
Sbjct: 270 EAYAHPAVEGVMFWGFMQGHMWRQDACLVNSDGTVNDAGERFIDLRREW-TSHARGHIDG 328
Query: 359 HGAYSFSGFLGEYIVSVTYANSTSQATFSLSPGD 392
G + F GF G Y+V + A TF++ GD
Sbjct: 329 DGHFKFRGFHGTYVVQLATATGKMHKTFTVEKGD 362
>Os01g0134800 Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC
3.2.1.8) (Fragment)
Length = 368
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 195/337 (57%), Gaps = 9/337 (2%)
Query: 60 FPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRS 119
FP G+ I T + N A+ +F F+ AV E+ELKWY TE + GQ+ + D+++AF
Sbjct: 28 FPIGACINKTAIQNPAFVDFFTKHFDWAVLENELKWYYTEAVQGQVSYSDADELIAFCDR 87
Query: 120 HRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLH 179
H VRGH IFW ++ WV+ L+ D LRAAV GR+++L+TRY G F H++VNNEMLH
Sbjct: 88 HGKPVRGHCIFWAVENVVQPWVRALNGDQLRAAVEGRLRSLVTRYGGRFPHYEVNNEMLH 147
Query: 180 YNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAG 239
F++QRLG + + F DP LF+N++NV E+ +D ++T + YV + DL+
Sbjct: 148 GAFFQQRLGDDINARMFRETAQMDPSPALFVNDYNV-ESANDPNATPERYVELVTDLQKR 206
Query: 240 GAVLEGIGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLR 299
GA + GIG++GH P ++ LD+LA GLP+W TE+D+S D +A LE VLR
Sbjct: 207 GAAVGGIGVQGHVTHPVGDVICDALDRLAVTGLPVWITELDVSA-ADEAVRADDLEIVLR 265
Query: 300 EAYSHPAVTGVMLWTALHPN---GCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPT 356
EA++HPAV G+MLW + N + D LN G L QEW T A G
Sbjct: 266 EAFAHPAVEGIMLWGFMQGNMWRSHAHLVDADGKLNE--AGHRYVGLRQEW-TSHARGQV 322
Query: 357 DAHGAYSFSGFLGEYIVSVTY-ANSTSQATFSLSPGD 392
D G + F GF G+Y+V +T A F + GD
Sbjct: 323 DGSGHFKFRGFHGKYVVQLTTGAGEMKYQQFDVGKGD 359
>Os07g0456700 Similar to (1,4)-beta-xylan endohydrolase (EC 3.2.1.8)
Length = 1101
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 207/386 (53%), Gaps = 16/386 (4%)
Query: 23 KDTIRKRRKRMATIHVADXXXXXXXXXXXXXXXTAKDFPFGSAIASTILGNQAYQKWFVD 82
K+ K RKR + T FPFGS I + + N+ +F+
Sbjct: 725 KEKTDKVRKRDVILKFQGSDAANLFGSSIKIQQTENSFPFGSCIGRSNIENEDLADFFMK 784
Query: 83 RFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPSWVK 142
FN AVFE+ELKWY TE G+L + D++L F R H + VRGH +FWE +D+ W++
Sbjct: 785 NFNWAVFENELKWYWTEAEQGRLNYKDSDELLEFCRKHNIQVRGHCLFWEVEDSVQPWIR 844
Query: 143 GLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQRLGANASVEFFSVAQDA 202
L L AA+ R+Q+L++RY+G+F H DVNNEMLH +FY+ RLG + F A
Sbjct: 845 SLHGHHLMAAIQNRLQSLLSRYKGQFKHHDVNNEMLHGSFYQDRLGNDIRAHMFREAHKL 904
Query: 203 DPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGGAVLEGIGLEGHFLKPNIPLMRA 262
DP A LF+N++NV + CD ST + + ++ DL+ GA + GIGL+GH P ++
Sbjct: 905 DPSAVLFVNDYNVEDRCDS-KSTPEKLIEQIVDLQERGAPVGGIGLQGHITHPVGDIICD 963
Query: 263 VLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVMLWTALHPNGCY 322
LDKL+ LGLPIW TE+D++ + +A LE LREA++HP+V G++LW G +
Sbjct: 964 SLDKLSILGLPIWITELDVTAE-NEHIRADDLEVYLREAFAHPSVEGIILW------GFW 1016
Query: 323 QMCLTDWNLNNLPVGDVVDR-------LLQEWQTGQAAGPTDAHGAYSFSGFLGEYIVSV 375
++ + + + + V ++ L QEW T G D HG F G+ G Y V V
Sbjct: 1017 ELFMFREHAHLVDVDGTINEAGKRYIALKQEWLT-SITGNVDHHGELKFRGYHGSYTVEV 1075
Query: 376 TYANSTSQATFSLSPGDETRHINIQI 401
+ +F + + + + + I
Sbjct: 1076 ATPSGKVTRSFVVDKDNAVQVVTLNI 1101
>Os05g0319900 Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC
3.2.1.8) (Fragment)
Length = 581
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 198/344 (57%), Gaps = 5/344 (1%)
Query: 60 FPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRS 119
FP G+ I +++ + + +F + F+ AVFE+ELKWY TE G L + D +L F
Sbjct: 241 FPLGTCINGSVIQDPNFVDFFTNNFDWAVFENELKWYWTEAQRGLLNYRDADALLDFCDR 300
Query: 120 HRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLH 179
H RGH IFW + W+K L DDL +AV GR+ L++RY G F H+DVNNEMLH
Sbjct: 301 HGKPARGHCIFWAVDGSVQQWIKDLGRDDLASAVRGRLTGLLSRYAGRFPHYDVNNEMLH 360
Query: 180 YNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAG 239
FY RLG +A+ F A DP A LF+N++NV E +D ++T + Y+ + LR G
Sbjct: 361 GRFYRDRLGDDAAALMFREAARLDPAARLFVNDYNV-ECANDPNATPEKYIELIDALRRG 419
Query: 240 GAVLEGIGLEGHFLKPNIPLMRAVLDKL-ATLGLPIWFTEIDISNRYDAQTQAVYLEQVL 298
GA + G+G++GH P+ ++ LDKL A+ GLPIW TE+D+S D +A LE VL
Sbjct: 420 GAAVGGVGIQGHVSNPSGEVICGALDKLAASTGLPIWITELDVSE-PDVSLRADDLEVVL 478
Query: 299 REAYSHPAVTGVMLWTALHPNGCYQ-MCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTD 357
REAY+HPAV GV+LW + Q L D + G + L +EW T A G D
Sbjct: 479 REAYAHPAVAGVVLWGFMQGRMWRQDASLVDADGTVNEAGQRLVNLRREW-TSDARGTID 537
Query: 358 AHGAYSFSGFLGEYIVSVTYANSTSQATFSLSPGDETRHINIQI 401
G ++F G+ G Y+V VT A TF++ GD + ++++I
Sbjct: 538 GDGHFTFRGYHGTYVVQVTTATGKILKTFTVDKGDTSLVLDMEI 581
>Os05g0298700 Similar to Xylan endohydrolase isoenzyme X-I (EC 3.2.1.8)
Length = 265
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 208 LFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGGAVLEGIGLEGHFLKPNI-PLMRAVLDK 266
LF+N++NV+ +D ++T + YV + LR GGA + GIG++GH P ++RA LDK
Sbjct: 70 LFVNDYNVLRG-NDPNATPEKYVELVDALRRGGAAVGGIGVQGHMDSPVAGQVIRAALDK 128
Query: 267 LATLG-LPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVMLWTALHPNGCYQMC 325
LA G PIW TE+D+S D +A LE VLREAY+HPAV GV+LW + QM
Sbjct: 129 LAAAGGAPIWITELDVSE-PDVGLRADDLEVVLREAYAHPAVEGVVLWGFMEG----QMW 183
Query: 326 LTDWNLNNL--PVGDVVDRLLQ---EWQTGQAAGPTDAHGAYSFSGFLGEYIVSVTYANS 380
D L + V + R LQ EW++ A G D G + F GF G Y+ VT A
Sbjct: 184 RRDAYLVDADGTVNEAGQRFLQLQREWRS-DARGIVDGDGRFKFRGFHGTYVAQVTTATG 242
Query: 381 TSQATFSLSPGDETRHINIQI 401
TF++ GD + +++ I
Sbjct: 243 KMLKTFTVEKGDNSLELDLDI 263
>AK108856
Length = 391
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 62 FGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHR 121
FG+ + L N + F E+ LKW +TEP G F D ++ F +
Sbjct: 103 FGTEMDQYHLNNNPLTTIVKNSFGQITHENSLKWDATEPQRGTFTFTNADAVVNFATQNG 162
Query: 122 VMVRGHNIFWENQDATPSWVKGLSP-DDLRAAVNGRIQNLMTRYRGEFAHWDVNNEM--- 177
++RGH + W +Q PSWV ++ + L + + L+TRY+G+ WDV NE+
Sbjct: 163 KLLRGHTLLWHSQ--LPSWVTQINDRNTLTTVIQNHVTALVTRYKGKILQWDVVNEIFAE 220
Query: 178 ---LHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLK 234
L + + + LG + F A+ ADP A L++N++N+ S + VA +
Sbjct: 221 DGNLRDSVFSRVLGEDFVGIAFKAARAADPDAKLYINDYNLDSAT--YSKVTNGMVAHVN 278
Query: 235 DLRAGGAVLEGIGLEGHFLKP 255
+ G ++GIG + H P
Sbjct: 279 KWISQGIPIDGIGSQAHLAAP 299
>AK110530
Length = 400
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 62 FGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHR 121
FG+ I L N A + F E+ +KW + EP G + D+++ + +
Sbjct: 112 FGTEIDHYHLSNSALMTIAKNSFGQISPENSMKWDAVEPSRGSFSYGNADKVVDWALQNG 171
Query: 122 VMVRGHNIFWENQDATPSWVKGLSP-DDLRAAVNGRIQNLMTRYRGEFAHWDVNNEM--- 177
+RGH + W +Q PSWV ++ + L + I N++T Y+G+ WDV NE+
Sbjct: 172 KYMRGHTLLWHSQ--LPSWVSQINDRNTLTTVIQNHITNIVTHYKGKILQWDVVNEIFAE 229
Query: 178 ---LHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLK 234
L + + + LG + F A+ ADP A L++N++N+ + + VA +
Sbjct: 230 DGSLRDSVFSRVLGEDFVGIAFRAARAADPNAKLYINDYNL--DIANYAKVTTGMVAHVN 287
Query: 235 DLRAGGAVLEGIGLEGHFLKP 255
A G ++GIG + H P
Sbjct: 288 KWVAAGIPIDGIGSQAHLAAP 308
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,293,378
Number of extensions: 526247
Number of successful extensions: 1056
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1012
Number of HSP's successfully gapped: 15
Length of query: 401
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 298
Effective length of database: 11,657,759
Effective search space: 3474012182
Effective search space used: 3474012182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)