Os03g0201800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tapetum specific protein (Tapetum-specific endoxylanase).
FiT-DB / Search/ Help/ Sample detail
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Os03g0201800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tapetum specific protein (Tapetum-specific endoxylanase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.23 | 0.466 | 2.99 | 0.111 | 0.171 | -0.71 | -0.313 | -2.65 | 0.121 | 8.26 | 995.6 | 5625 | -- | -- |
| 100.74 | 0.467 | 2.99 | 0.0803 | 0.173 | -0.476 | -0.3 | -- | 0.126 | 8.22 | 996.5 | 6226 | -- | -- |
| 98.51 | 0.462 | 2.99 | 0.116 | 0.167 | -0.677 | -- | -2.52 | 0.117 | 8.2 | 995.7 | 5592 | -- | -- |
| 100.98 | 0.468 | 2.99 | 0.0728 | 0.173 | -0.468 | -- | -- | 0.127 | 8.67 | 996.6 | 6348 | -- | -- |
| 100.09 | 0.466 | 2.99 | 0.107 | -- | -0.684 | -- | -2.54 | 0.123 | -- | 995.8 | 5595 | -- | -- |
| 103.06 | 0.476 | 2.99 | 0.0956 | 0.178 | -- | -0.278 | -- | 0.105 | 8.32 | -- | -- | -- | -- |
| 103.28 | 0.476 | 2.99 | 0.0879 | 0.178 | -- | -- | -- | 0.105 | 8.69 | -- | -- | -- | -- |
| 102.65 | 0.472 | 2.99 | 0.0733 | -- | -0.493 | -- | -- | 0.129 | -- | 996.5 | 6069 | -- | -- |
| 101.12 | 0.468 | 2.99 | -- | 0.172 | -0.475 | -- | -- | 0.119 | 8.65 | 996.6 | 6379 | -- | -- |
| 105.08 | 0.479 | 3 | 0.0883 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 103.49 | 0.476 | 2.99 | -- | 0.178 | -- | -- | -- | 0.0956 | 8.66 | -- | -- | -- | -- |
| 102.79 | 0.472 | 2.99 | -- | -- | -0.501 | -- | -- | 0.124 | -- | 996.6 | 6097 | -- | -- |
| 105.28 | 0.479 | 3 | -- | -- | -- | -- | -- | 0.0971 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.54 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 4 | 97.68 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 7 | 97.77 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 15 | 98.23 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 19 | 98.30 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 21 | 98.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 25 | 98.34 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 26 | 98.35 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 53 | 98.36 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 63 | 98.36 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 66 | 98.37 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 67 | 98.37 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 131 | 98.47 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 133 | 98.49 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 134 | 98.49 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 137 | 98.50 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 140 | 98.52 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 196 | 98.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 207 | 98.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 234 | 98.87 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 18 | 22 |
| 251 | 98.94 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 252 | 98.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 272 | 98.99 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 274 | 98.99 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 277 | 99.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 279 | 99.00 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 280 | 99.00 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 283 | 99.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 284 | 99.00 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 286 | 99.00 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 292 | 99.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 293 | 99.00 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 302 | 99.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 304 | 99.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 310 | 99.07 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 311 | 99.09 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 316 | 99.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 319 | 99.12 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 11 |
| 324 | 99.13 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 325 | 99.14 | atmosphere | 995.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 332 | 99.15 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 1 | 14 |
| 333 | 99.15 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 344 | 99.17 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 22 | 17 |
| 358 | 99.19 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 399 | 99.27 | atmosphere | 995.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 401 | 99.28 | radiation | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 425 | 99.37 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 4 |
| 436 | 99.39 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 442 | 99.41 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 454 | 99.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 456 | 99.49 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 458 | 99.49 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 459 | 99.49 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 472 | 99.53 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 485 | 99.58 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 504 | 99.60 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 512 | 99.61 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 523 | 99.61 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 23 | 3 |
| 641 | 99.64 | atmosphere | 995.0 | 4320 | < th | dose dependent | no | NA | NA |
| 695 | 99.66 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 703 | 99.67 | humidity | 90.0 | 720 | < th | dose independent | rect. | 24 | 5 |
| 710 | 99.68 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 716 | 99.69 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 718 | 99.69 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 725 | 99.70 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 745 | 99.73 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 747 | 99.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 750 | 99.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 754 | 99.73 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 763 | 99.73 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 764 | 99.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 765 | 99.73 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 780 | 99.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 783 | 99.73 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 812 | 99.74 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 820 | 99.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 823 | 99.75 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 827 | 99.75 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 829 | 99.75 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 834 | 99.75 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 836 | 99.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 839 | 99.75 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 844 | 99.75 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 950 | 99.84 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 956 | 99.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 958 | 99.84 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 979 | 99.87 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 4 |