BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0201800 Os03g0201800|AK105496
(582 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0201800 Similar to Tapetum specific protein (Tapetum-s... 1204 0.0
Os10g0351700 Similar to Tapetum specific protein (Tapetum-s... 627 e-179
Os10g0351600 Similar to Tapetum specific protein (Tapetum-s... 577 e-165
Os03g0201901 Glycoside hydrolase, family 10 protein 449 e-126
Os03g0201400 Glycoside hydrolase, family 10 protein 376 e-104
Os03g0243700 Glycoside hydrolase, family 10 protein 340 1e-93
Os05g0304900 Glycoside hydrolase, family 10 protein 340 2e-93
Os07g0456700 Similar to (1,4)-beta-xylan endohydrolase (EC ... 222 6e-58
Os01g0134800 Similar to (1,4)-beta-xylan endohydrolase, iso... 207 1e-53
Os01g0134900 Similar to (1,4)-beta-xylan endohydrolase, iso... 205 7e-53
Os03g0672900 Similar to RXF12 protein (Xylan endohydrolase)... 204 1e-52
Os05g0319900 Similar to (1,4)-beta-xylan endohydrolase, iso... 199 4e-51
AK108856 82 1e-15
AK110530 77 3e-14
Os05g0298700 Similar to Xylan endohydrolase isoenzyme X-I (... 75 2e-13
>Os03g0201800 Similar to Tapetum specific protein (Tapetum-specific endoxylanase)
Length = 582
Score = 1204 bits (3115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 MKVFTGKLVFFLAIILFEGCLVRSQSVPYDYSANIECVKEPEKPLYGGGILKETEAKGYA 60
MKVFTGKLVFFLAIILFEGCLVRSQSVPYDYSANIECVKEPEKPLYGGGILKETEAKGYA
Sbjct: 1 MKVFTGKLVFFLAIILFEGCLVRSQSVPYDYSANIECVKEPEKPLYGGGILKETEAKGYA 60
Query: 61 SGKKLLSENSKSAAPVKGSALKVDLKKDHHYALSVWLQLSKGEGDIRAVLVTPDGKFNTA 120
SGKKLLSENSKSAAPVKGSALKVDLKKDHHYALSVWLQLSKGEGDIRAVLVTPDGKFNTA
Sbjct: 61 SGKKLLSENSKSAAPVKGSALKVDLKKDHHYALSVWLQLSKGEGDIRAVLVTPDGKFNTA 120
Query: 121 GMIAAKCGCWTMLKGGATSYDDGKGDIFFETNVTAEVMAEGMALQPFSFDEWKGHRAESV 180
GMIAAKCGCWTMLKGGATSYDDGKGDIFFETNVTAEVMAEGMALQPFSFDEWKGHRAESV
Sbjct: 121 GMIAAKCGCWTMLKGGATSYDDGKGDIFFETNVTAEVMAEGMALQPFSFDEWKGHRAESV 180
Query: 181 KKERMKKVKITVVGPDGKPVPEADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRY 240
KKERMKKVKITVVGPDGKPVPEADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRY
Sbjct: 181 KKERMKKVKITVVGPDGKPVPEADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRY 240
Query: 241 ATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGV 300
ATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGV
Sbjct: 241 ATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGV 300
Query: 301 PELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKP 360
PELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKP
Sbjct: 301 PELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKP 360
Query: 361 ILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGS 420
ILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGS
Sbjct: 361 ILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGS 420
Query: 421 IDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGFAHPAVKGIVLWGAWHAKGCYVMCF 480
IDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGFAHPAVKGIVLWGAWHAKGCYVMCF
Sbjct: 421 IDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGFAHPAVKGIVLWGAWHAKGCYVMCF 480
Query: 481 TDNSFKNLPVGDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEYNATVKHKEFKENCMTL 540
TDNSFKNLPVGDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEYNATVKHKEFKENCMTL
Sbjct: 481 TDNSFKNLPVGDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEYNATVKHKEFKENCMTL 540
Query: 541 DLDSKAEAKIELRSDKVLTPWVELKYPNRHLGLHRSQESGCS 582
DLDSKAEAKIELRSDKVLTPWVELKYPNRHLGLHRSQESGCS
Sbjct: 541 DLDSKAEAKIELRSDKVLTPWVELKYPNRHLGLHRSQESGCS 582
>Os10g0351700 Similar to Tapetum specific protein (Tapetum-specific endoxylanase)
Length = 578
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/567 (52%), Positives = 397/567 (70%), Gaps = 29/567 (5%)
Query: 11 FLAIILFEGCLVRSQSVPYDYSANIECVKEPEKPLYGGGILKETEAK----GYASGKKL- 65
+ I L +G +V QS+ YD++A+IEC+++P KPLY GGI++ E G+++ + +
Sbjct: 9 LICISLCQGWVV--QSLEYDHTASIECLRDPMKPLYNGGIIQNGEFNSGLMGWSTHRDIK 66
Query: 66 --LSEN---------------SKSAAPVKGSALKVDLKKDHHYALSVWLQLSKGEGDIRA 108
LS + S +A P + K+ L+ D HY+LS WLQ+S G ++A
Sbjct: 67 AGLSSSPSGNKFAVVQRADSLSGAAVPSRSVYQKIQLQGDTHYSLSAWLQVSAGAAHVKA 126
Query: 109 VLVTPDGKFNTAGMIAAKCGCWTMLKGGATSYDDGKGDIFFETNVTAEVMAEGMALQPFS 168
+ TP+G+ AG ++A+ GCW+MLKGG T+Y G G IFFE++ ++ + ++LQPF+
Sbjct: 127 FVKTPNGERVVAGSVSAQSGCWSMLKGGMTAYSSGPGQIFFESDAPVDIWMDSVSLQPFT 186
Query: 169 FDEWKGHRAESVKKERMKKVKITVVGPDGKPVPEADVSLERVGKGFPLGNAMTKEILDMP 228
FDEW HR +S K R V++ V G DG P+ A V +E + GFP GNA+TKEILD+P
Sbjct: 187 FDEWDAHRQQSAAKVRRSTVRVVVRGADGAPMANATVIVELLRAGFPFGNALTKEILDLP 246
Query: 229 EYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQ 288
YEKWF +RF AT ENEMKWYS E+ QN EDY+V+D M++LA+K+NI +RGHNVFWDDQ
Sbjct: 247 AYEKWFTSRFTVATFENEMKWYSNEWAQNNEDYRVADAMLKLAQKYNIKIRGHNVFWDDQ 306
Query: 289 DKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEGKLGKDASAE 348
+ QM WV L + +LK AM KRLK +VTRYAGKVIHWDVVNENLHFNFFE KLG +AS
Sbjct: 307 NSQMKWVTPLNLDQLKAAMQKRLKSVVTRYAGKVIHWDVVNENLHFNFFETKLGPNASPM 366
Query: 349 IFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESH 408
I+ V LD ILFMNEFNT+E+P D P+P+KYVAK+KQI+ +PGN+ LK G+GLESH
Sbjct: 367 IYNQVGALDKNAILFMNEFNTLEQPGDPNPVPSKYVAKMKQIQSYPGNSALKLGVGLESH 426
Query: 409 FAAPNIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGFAHPAVKGIVLWG 468
F+ PNIPYMR ++DTLAQ K+P+WLTEVDV NQV++L++V+REG+AHP+V G+++W
Sbjct: 427 FSTPNIPYMRSALDTLAQLKLPMWLTEVDVVKGPNQVKFLEQVLREGYAHPSVNGMIMWA 486
Query: 469 AWHAKGCYVMCFTDNSFKNLPVGDAIDKLLKEWTAGHTGKTD-SKGVLEVEIFHGEYNAT 527
AWHAKGCYVMC TDNSFKNLPVG +DKL+ EW T T + G +E+++ HG+YN T
Sbjct: 487 AWHAKGCYVMCLTDNSFKNLPVGTLVDKLIAEWKTHKTAATTGADGAVELDLPHGDYNLT 546
Query: 528 VKHKEFKEN----CMTLDLDSKAEAKI 550
V H N MT+D S A ++
Sbjct: 547 VSHPSLGTNATVRAMTVDAASLASERL 573
>Os10g0351600 Similar to Tapetum specific protein (Tapetum-specific endoxylanase)
Length = 586
Score = 577 bits (1487), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/587 (48%), Positives = 375/587 (63%), Gaps = 36/587 (6%)
Query: 1 MKVFTGKLVFFLAIILFEGCLV---RSQSVPYDYSA----NIECVKEPEKPLYGGGILKE 53
MKVF KL L ++ F G + R + Y ++C+ P PLY GG++K
Sbjct: 1 MKVFMEKLGIIL-LLSFRGVKIFWLRHSTKAMFYCGISICVVQCLSNPMIPLYSGGVIKN 59
Query: 54 TE-----------------AKGYASGKKLLSENSKSAAPVKGSALKVDLKKDHHYALSVW 96
+E +SG K +E P + V ++ + HY+LS W
Sbjct: 60 SEFNVGLTDWTVPLGVQATVNSSSSGNKF-AEARTDGQPSRTVYQTVQIQPNTHYSLSAW 118
Query: 97 LQLSKGEGDIRAVLVTPDGKFNTAGMIAAKCGCWTMLKGGATSYDDGKGDIFFETNVTAE 156
LQ+S G ++ AV+ TPDG+F AG AK GCW+M+KGG TSY G+G ++FE +
Sbjct: 119 LQVSAGTANVMAVVRTPDGQFVAAGATVAKSGCWSMIKGGMTSYSSGQGQLYFEADAAVA 178
Query: 157 VMAEGMALQPFSFDEWKGHRAE-SVKKERMKKVKITVV-GPDGKPVPEADVSLERVGKGF 214
+ + ++LQPF+FDEW HR + S + R + + V G DG PVP A V+ E + GF
Sbjct: 179 IWVDSVSLQPFTFDEWDAHRQQQSAGRARRSTLGVVVARGTDGAPVPNATVTAELLRPGF 238
Query: 215 PLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKH 274
P GNAMT+EILD P YE+WFA+RF AT ENEMKWY+TE Q EDY+V D M+ LAE+H
Sbjct: 239 PFGNAMTREILDNPAYEQWFASRFTVATFENEMKWYATEGRQGHEDYRVPDAMLALAERH 298
Query: 275 NITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRY-AGKVIHWDVVNENLH 333
+ +RGHNVFWDDQ QM WV LG EL+ AM KRL+ +V+RY G+VI WDVVNENLH
Sbjct: 299 GVRVRGHNVFWDDQSTQMAWVRSLGPDELRAAMDKRLRSVVSRYGGGRVIGWDVVNENLH 358
Query: 334 FNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREF 393
++F++GKLG DAS I+ V K+D + LFMNEFNT+E+P D A + +KYVAK+ QIR F
Sbjct: 359 WSFYDGKLGPDASPAIYHQVGKIDGETPLFMNEFNTVEQPVDMAAMASKYVAKMNQIRSF 418
Query: 394 PGNADLKYGIGLESHFAA-PNIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVM 452
PGN LK +GLESHF A PNIP+MR ++DTLAQ K+PIWLTE+DV NQ ++L+EV+
Sbjct: 419 PGNGGLKLAVGLESHFGATPNIPFMRATLDTLAQLKLPIWLTEIDVANGTNQAQHLEEVL 478
Query: 453 REGFAHPAVKGIVLWGAWHAKGCYVMCFTDNSFKNLPVGDAIDKLLKEWTAG--HTGKTD 510
REG HP V G+V+W AWHA CYVMC TD+ FKNL VGD +DKL+ EW TD
Sbjct: 479 REGHGHPNVDGMVMWAAWHATACYVMCLTDDEFKNLAVGDVVDKLIAEWRTHPVAVATTD 538
Query: 511 SKGVLEVEIFHGEYNATVKHKEFKENCM-TLDLD---SKAEAKIELR 553
+ GV+E+++ HGEYN TV H + + TL +D S +E I++R
Sbjct: 539 ADGVVELDLAHGEYNVTVTHPSLVSSAVRTLTVDASSSSSENAIDIR 585
>Os03g0201901 Glycoside hydrolase, family 10 protein
Length = 412
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 205/410 (50%), Positives = 278/410 (67%), Gaps = 6/410 (1%)
Query: 149 FETNVTAEVMAEGMALQPFSFDEWKGHRAESVKKERMKKVKITVVGPDGKPVPEADVSLE 208
+++N T ++ + ++LQPFS +EW H ++KK R K V++ G PV A + +E
Sbjct: 3 WQSNATVDIWVDNVSLQPFSREEWSAHHGAAIKKARKKTVRLQARDAAGNPVAGARMHIE 62
Query: 209 RVGKGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMV 268
V GFPLG+AM+KEIL P Y++WF +RF T ENEMKWYSTE EDY V D M+
Sbjct: 63 HVRNGFPLGSAMSKEILTNPGYQRWFTSRFTVTTFENEMKWYSTEAIPGREDYSVPDAML 122
Query: 269 ELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVIHWDVV 328
A+ H I +RGHN+FWDD QM WV+ L +L+ A KR+K +++RY+G+VI WDVV
Sbjct: 123 RFAKSHGIAVRGHNIFWDDPSTQMGWVKALSGEQLRRATEKRIKSVMSRYSGQVIAWDVV 182
Query: 329 NENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLK 388
NENLHF+FFEG+ G +ASA +R ++D ++ MNEFNT+E+P D LP KY+ KL
Sbjct: 183 NENLHFDFFEGRFGWEASAAFYRKAHQMDGGALMSMNEFNTLEQPGDLTVLPGKYLRKLW 242
Query: 389 QIREFPGNAD-LKYGIGLESHFAA-PNIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVE 446
QI+ FPGN + + GIGLE HF+A PNIPY+R ++DT+AQA PIWLTE+DV P +Q
Sbjct: 243 QIKAFPGNGNAARMGIGLEGHFSAQPNIPYIRAALDTMAQANAPIWLTEIDVAPGPDQAR 302
Query: 447 YLDEVMREGFAHPAVKGIVLWGAWHAKGCYVMCFTDNSFKNLPVGDAIDKLLKEW-TAGH 505
+L++++RE +AHPAV GI+LW AWH +GCYVMC TDN+FKNLP GD +DKL+ EW T H
Sbjct: 303 HLEQILREVYAHPAVHGIILWTAWHPQGCYVMCLTDNNFKNLPAGDVVDKLIWEWKTRSH 362
Query: 506 TGKTDSKGVLEVEIFHGEYNATVKHKEFKENC---MTLDLDSKAEAKIEL 552
G D+ G E E+FHG+Y TV H +++D +S E I +
Sbjct: 363 VGVADADGYYETELFHGDYKVTVTHPAANSTVAQSLSVDRESDNEFTIHV 412
>Os03g0201400 Glycoside hydrolase, family 10 protein
Length = 339
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 228/339 (67%), Gaps = 12/339 (3%)
Query: 220 MTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLR 279
M+ EIL P Y++WFA+RF T ENEMKWYSTE EDY V D M+E A H I +R
Sbjct: 1 MSGEILRNPSYQRWFASRFTVTTFENEMKWYSTEPAPGREDYSVPDAMLEFARSHGIAVR 60
Query: 280 GHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEG 339
GHNVFWDD ++Q WV+ L P+L A ++R++ +V RYAGK+I WDVVNENLHF+FFE
Sbjct: 61 GHNVFWDDPNQQPRWVQGLPYPQLLAAASRRIRSVVARYAGKLIAWDVVNENLHFSFFER 120
Query: 340 KLGKDASAEIFRDVAKLDS-KPILFMNEFNTIEEPNDAAPLPTKYVAKLKQ-IREFPGNA 397
+ G DAS + LD+ ++FMNE+NT+E+P D A LP +YV +LKQ I +P N
Sbjct: 121 RFGWDASTAFYAAARMLDTGSTLMFMNEYNTLEQPGDMAALPARYVQRLKQIIGGYPQNG 180
Query: 398 DLKYGIGLESHFAAP-NIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGF 456
IGLE HF AP NIPYMR ++DTLAQA VP+WLTEVDV +Q YL+E++RE +
Sbjct: 181 -AGMAIGLEGHFTAPVNIPYMRAALDTLAQAGVPVWLTEVDVGGGASQAYYLEEILREAY 239
Query: 457 AHPAVKGIVLWGAWHAKGCYVMCFTDNSFKNLPVGDAIDKLLKEW-TAGHTGKTDSKGVL 515
AHPAV+G++LW AW +GCYVMC TDN F NLP GD +D+L+ EW TA G TD++G
Sbjct: 240 AHPAVQGVILWAAWRPQGCYVMCLTDNDFNNLPQGDVVDRLITEWSTAPRAGTTDAEGFF 299
Query: 516 EVEIFHGEYNATVKHKEFKENCMTLDLDSKAEAKIELRS 554
+ E+ HGEY TV H +L+ K+E+ S
Sbjct: 300 QAELAHGEYKVTVTHP-------SLNTSVSQSVKVEMGS 331
>Os03g0243700 Glycoside hydrolase, family 10 protein
Length = 401
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 225/372 (60%), Gaps = 7/372 (1%)
Query: 163 ALQPFSFDEWKGHRAESVKKERMKKVKITVVGPDGKPVPEADVSLERVGKGFPLGNAMTK 222
+LQPF+ D+W H+ ++++K R + I V G V A VS+ + K FP G+A+
Sbjct: 9 SLQPFTSDQWSMHQKDTIRKRRKRMATIHVADQQGGRVVGASVSVRQTAKDFPFGSAIAS 68
Query: 223 EILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHN 282
IL Y+KWF RF A E+E+KWYSTE + + V D+M+ H + +RGHN
Sbjct: 69 TILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHN 128
Query: 283 VFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFNFFEGKLG 342
+FW++QD WV+ L +L+ A+ R+++++TRY G+ HWDV NE LH+NF+E +LG
Sbjct: 129 IFWENQDATPSWVKGLSPDDLRAAVNGRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQRLG 188
Query: 343 KDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYG 402
+AS E F D LFMNEFN IE +D + YVAKLK +R G A L+ G
Sbjct: 189 ANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLR--AGGAVLE-G 245
Query: 403 IGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEVDVK---PCKNQVEYLDEVMREGFAHP 459
IGLE HF PNIP MR +D LA +PIW TE+D+ + Q YL++V+RE ++HP
Sbjct: 246 IGLEGHFLKPNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHP 305
Query: 460 AVKGIVLWGAWHAKGCYVMCFTDNSFKNLPVGDAIDKLLKEWTAGH-TGKTDSKGVLEVE 518
AV G++LW A H GCY MC TD + NLPVGD +D+LL+EW G G TD+ G
Sbjct: 306 AVTGVMLWTALHPNGCYQMCLTDWNLNNLPVGDVVDRLLQEWQTGQAAGPTDAHGAYSFS 365
Query: 519 IFHGEYNATVKH 530
F GEY +V +
Sbjct: 366 GFLGEYIVSVTY 377
>Os05g0304900 Glycoside hydrolase, family 10 protein
Length = 480
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 259/454 (57%), Gaps = 16/454 (3%)
Query: 90 HYALSVWLQLSKGEGDIRA-----VLVTPDGKFNTAGMIAAKCGCWTMLKGGATSYDDGK 144
H L W K +G A +L + G + CW+ LKGG T +
Sbjct: 2 HAPLLFWHGWVKIDGPTTAHVKAKILTLANAASQCLGTALVRNDCWSFLKGGFTLNSASE 61
Query: 145 GDI-FFETNV--TAEVMAEGMALQPFSFDEWKGHRAESVKKERMKKVKITVVGPDGKPVP 201
+ +F+T + + +LQPFS ++W HR + ++ R + V + V +G V
Sbjct: 62 TSVLYFQTASPNASTISIRSASLQPFSPEQWNQHREDRIQLNRKRFVNVHVADSNGSRVV 121
Query: 202 EADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDY 261
A V++ ++ + FP G+A+++ IL Y++WF RF A ENE+KWY+TE + +EDY
Sbjct: 122 GAKVAVHQITRDFPFGSAISRTILGNKLYQEWFNKRFNAAVFENELKWYATEPYPGKEDY 181
Query: 262 KVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGK 321
V+D++++ + ++ RGHN+FW+D WV+ L +L+ A++ R++ +++RY G
Sbjct: 182 TVADQLLQFVQANDAVARGHNIFWEDPKYTPAWVKNLTGSQLRAAVSGRIESLLSRYKGD 241
Query: 322 VIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPT 381
+HWDV NE LHF+F+E +LG +A+ + F + D LF+N+FN +E +D +
Sbjct: 242 FVHWDVSNEMLHFDFYENRLGGNATVDFFDTAKRADPLATLFLNDFNVVEVCDDLSSSAD 301
Query: 382 KYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEVDVKPC 441
YV++L+Q+ + G + GIGLE HF PNIPY+R +D L ++PIWLTE+D+
Sbjct: 302 SYVSRLRQLAD--GGVTFE-GIGLEGHFGKPNIPYVRAVLDKLGTLRLPIWLTEIDISSS 358
Query: 442 ---KNQVEYLDEVMREGFAHPAVKGIVLWGAWHAKG-CYVMCFTDNSFKNLPVGDAIDKL 497
K Q YL+EV+REGFAHP+V GI+LW A CY MC T+ +F NLP GD +DKL
Sbjct: 359 FDPKTQAAYLEEVLREGFAHPSVDGIMLWTAMDTNASCYQMCLTNQNFTNLPAGDVVDKL 418
Query: 498 LKEWTAGHT-GKTDSKGVLEVEIFHGEYNATVKH 530
L EW T G T+ +G F GEY +V +
Sbjct: 419 LGEWQTKETLGTTNDRGSFNFSAFLGEYKLSVTY 452
>Os07g0456700 Similar to (1,4)-beta-xylan endohydrolase (EC 3.2.1.8)
Length = 1101
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 234/502 (46%), Gaps = 27/502 (5%)
Query: 42 EKPLYGGGILKETEAKGYASGKKLLSENSKSAAPVKGSALKVDLKKDHHYALSVWLQL-S 100
E P ILK+ AK + G +L+ N + L+ Y +S W++ S
Sbjct: 586 ESPHMLSAILKDPSAKQHIRGSYILATNRTDVWMGPSQLITDKLRLHTTYRVSAWVRAGS 645
Query: 101 KGEGDIRA-VLVTPDGKFNTAGMIAAKCGCWTMLKGGATSYDDGKGDIFFETNVTAEVMA 159
G G V + D ++ G + A W LKG + V
Sbjct: 646 GGHGRYHVNVCLAVDHQWVNGGQVEADGDQWYELKGAFKLEKKPSKVTAYVQGPPPGVDL 705
Query: 160 EGMALQPFSFDEWKGHRAESVK----KERMKKVKITVVGPDGKPVPEADVSLERVGKGFP 215
M Q ++ D + R E +K K R + V + G D + + + +++ FP
Sbjct: 706 RVMGFQIYAVD--RKARFEYLKEKTDKVRKRDVILKFQGSDAANLFGSSIKIQQTENSFP 763
Query: 216 LGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHN 275
G+ + + ++ + +F F +A ENE+KWY TE Q +YK SD+++E KHN
Sbjct: 764 FGSCIGRSNIENEDLADFFMKNFNWAVFENELKWYWTEAEQGRLNYKDSDELLEFCRKHN 823
Query: 276 ITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVIHWDVVNENLHFN 335
I +RGH +FW+ +D W+ L L A+ RL+ +++RY G+ H DV NE LH +
Sbjct: 824 IQVRGHCLFWEVEDSVQPWIRSLHGHHLMAAIQNRLQSLLSRYKGQFKHHDVNNEMLHGS 883
Query: 336 FFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPG 395
F++ +LG D A +FR+ KLD +LF+N++N +E+ D+ P K + ++ ++E
Sbjct: 884 FYQDRLGNDIRAHMFREAHKLDPSAVLFVNDYN-VEDRCDSKSTPEKLIEQIVDLQERGA 942
Query: 396 NADLKYGIGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVEY--LDEVMR 453
GIGL+ H P + S+D L+ +PIW+TE+DV + L+ +R
Sbjct: 943 PVG---GIGLQGHITHPVGDIICDSLDKLSILGLPIWITELDVTAENEHIRADDLEVYLR 999
Query: 454 EGFAHPAVKGIVLWGAW-------HAKGCYVMCFTDNSFKNLPVGDAIDKLLKEWTAGHT 506
E FAHP+V+GI+LWG W HA + D + G L +EW T
Sbjct: 1000 EAFAHPSVEGIILWGFWELFMFREHAH----LVDVDGTINE--AGKRYIALKQEWLTSIT 1053
Query: 507 GKTDSKGVLEVEIFHGEYNATV 528
G D G L+ +HG Y V
Sbjct: 1054 GNVDHHGELKFRGYHGSYTVEV 1075
>Os01g0134800 Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC
3.2.1.8) (Fragment)
Length = 368
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 190/365 (52%), Gaps = 26/365 (7%)
Query: 197 GKPVPEADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQ 256
G+ + + +V FP+G + K + P + +F F +A LENE+KWY TE Q
Sbjct: 11 GRRTGGTAIRVVQVENSFPIGACINKTAIQNPAFVDFFTKHFDWAVLENELKWYYTEAVQ 70
Query: 257 NEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVT 316
+ Y +D+++ ++H +RGH +FW ++ WV L +L+ A+ RL+ +VT
Sbjct: 71 GQVSYSDADELIAFCDRHGKPVRGHCIFWAVENVVQPWVRALNGDQLRAAVEGRLRSLVT 130
Query: 317 RYAGKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDA 376
RY G+ H++V NE LH FF+ +LG D +A +FR+ A++D P LF+N++N +E ND
Sbjct: 131 RYGGRFPHYEVNNEMLHGAFFQQRLGDDINARMFRETAQMDPSPALFVNDYN-VESANDP 189
Query: 377 APLPTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEV 436
P +YV + +++ GIG++ H P + ++D LA +P+W+TE+
Sbjct: 190 NATPERYVELVTDLQKRGAAVG---GIGVQGHVTHPVGDVICDALDRLAVTGLPVWITEL 246
Query: 437 DVKPCKNQVEY--LDEVMREGFAHPAVKGIVLWG-----AWHAKGCYVMCFTDNSFKNLP 489
DV V L+ V+RE FAHPAV+GI+LWG W + V D K
Sbjct: 247 DVSAADEAVRADDLEIVLREAFAHPAVEGIMLWGFMQGNMWRSHAHLV----DADGKLNE 302
Query: 490 VGDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEY-------NATVKHKEFK----ENCM 538
G L +EWT+ G+ D G + FHG+Y +K+++F + +
Sbjct: 303 AGHRYVGLRQEWTSHARGQVDGSGHFKFRGFHGKYVVQLTTGAGEMKYQQFDVGKGDGPL 362
Query: 539 TLDLD 543
LD+D
Sbjct: 363 VLDMD 367
>Os01g0134900 Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC
3.2.1.8) (Fragment)
Length = 371
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 195/363 (53%), Gaps = 29/363 (7%)
Query: 200 VPEADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEE 259
+ A V + ++ FP G + ++ P + +F F +A ENE+KWY TE Q +
Sbjct: 18 ISGASVRVMQMDSSFPFGACINGGVIQNPAFVDFFTKHFDWAVFENELKWYWTEAQQGQL 77
Query: 260 DYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYA 319
+Y +D +++ +++ +RGH +FW + W++ L +L A+ RL ++TRYA
Sbjct: 78 NYADADALLDFCDRYGKPVRGHCIFWAVDNVVQQWIKGLDHDQLTAAVQGRLTGLLTRYA 137
Query: 320 GKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPL 379
G+ H+DV NE LH +F++ +LG D +A +FR+ A+LD LF+N++N +E ND
Sbjct: 138 GRFPHYDVNNEMLHGSFYQDRLGDDINAFMFRETARLDPGATLFVNDYN-VEGGNDPNAT 196
Query: 380 PTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEVDVK 439
P KY+ ++ +++ G A GIGL+ H P + ++D LA +P+WLTE+DV
Sbjct: 197 PEKYIEQITALQQ-KGAA--VGGIGLQGHVTNPVGEVICDALDKLATTDLPVWLTELDV- 252
Query: 440 PCKNQVEY----LDEVMREGFAHPAVKGIVLWG-----AWHAKGCYVMCFTDNSFKNLPV 490
C++ V+ L+ V+RE +AHPAV+G++ WG W C V +D + +
Sbjct: 253 -CESDVDLRADDLEVVLREAYAHPAVEGVMFWGFMQGHMWRQDACLVN--SDGTVND--A 307
Query: 491 GDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEY-----NATVK-HKEFK----ENCMTL 540
G+ L +EWT+ G D G + FHG Y AT K HK F + + L
Sbjct: 308 GERFIDLRREWTSHARGHIDGDGHFKFRGFHGTYVVQLATATGKMHKTFTVEKGDTPLVL 367
Query: 541 DLD 543
D+D
Sbjct: 368 DMD 370
>Os03g0672900 Similar to RXF12 protein (Xylan endohydrolase) (F19C14.2 protein)
Length = 756
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 170/328 (51%), Gaps = 6/328 (1%)
Query: 204 DVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKV 263
+V + +V FPLG + + +D +Y +F F +A NE+KWY TE + + +Y
Sbjct: 405 EVRVRQVSNSFPLGACIMRTNMDNEDYVDFFTKHFNWAVFGNELKWYWTEPEKGQLNYAD 464
Query: 264 SDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRLKDIVTRYAGKVI 323
+D +++L H + +RGH +FW+ WV+ L EL A+A R+ ++TRY GK
Sbjct: 465 ADDLLKLCADHGMCVRGHCIFWEVDSAVQQWVKALPADELSAAVASRINGLLTRYKGKFR 524
Query: 324 HWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKY 383
H+DV NE LH +F++ KLG A A +FR ++LD +LF+N++N D P Y
Sbjct: 525 HYDVNNEMLHGSFYQDKLGAGARAAMFRAASELDPDALLFVNDYNVEGACVDVRATPEAY 584
Query: 384 VAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGSIDTLAQAKVPIWLTEVDVKPCKN 443
+A++ ++E G+GL+ H AP +R ++D LA +P+W TE+DV
Sbjct: 585 IAQVTGLQE---QGAAVGGVGLQGHVTAPVGAVVRAALDRLAVLGLPLWFTELDVSSANE 641
Query: 444 QVEY--LDEVMREGFAHPAVKGIVLWGAWHAKGCYVMC-FTDNSFKNLPVGDAIDKLLKE 500
V L+ ++RE +AHPAV G+VLWG W D + G + +L +E
Sbjct: 642 HVRADDLEAMLREAYAHPAVDGVVLWGFWELSMSRDDAHLVDAEGEVNEAGRRLLQLKRE 701
Query: 501 WTAGHTGKTDSKGVLEVEIFHGEYNATV 528
W G+ D G HG Y+ V
Sbjct: 702 WLTRAHGRADGNGEFRFRGHHGAYHVDV 729
>Os05g0319900 Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC
3.2.1.8) (Fragment)
Length = 581
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 218/465 (46%), Gaps = 35/465 (7%)
Query: 91 YALSVWLQLSKGEGD--------IRAVLVTPDGK----FNTAGMIAAKCGCWTMLKGGAT 138
Y ++ W+ + G G+ +R L DG + A G W + G
Sbjct: 99 YRVAGWVAVQSGGGEHAGGESHVVRVSLHVDDGGECRVLGCGAVCAGVAGGWVEINGAFR 158
Query: 139 SYDDGKGDIFFETN-VTAEVMAEGMALQPFSFDEWKG--HRAESVKKERMKKVKITVVGP 195
+G + A V + M L+ F+ D H E K R + V + G
Sbjct: 159 LKATPRGATAVHVHGAPAGVDVKLMDLRVFAADRKARFRHLKEKTDKVRKRDVVLKFSGG 218
Query: 196 DG----KPVPEADVSLERVGKGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYS 251
G +P A V + ++ FPLG + ++ P + +F F +A ENE+KWY
Sbjct: 219 AGVEATASIPGAAVRVVQMDNVFPLGTCINGSVIQDPNFVDFFTNNFDWAVFENELKWYW 278
Query: 252 TEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRL 311
TE + +Y+ +D +++ ++H RGH +FW W++ LG +L A+ RL
Sbjct: 279 TEAQRGLLNYRDADALLDFCDRHGKPARGHCIFWAVDGSVQQWIKDLGRDDLASAVRGRL 338
Query: 312 KDIVTRYAGKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIE 371
+++RYAG+ H+DV NE LH F+ +LG DA+A +FR+ A+LD LF+N++N +E
Sbjct: 339 TGLLSRYAGRFPHYDVNNEMLHGRFYRDRLGDDAAALMFREAARLDPAARLFVNDYN-VE 397
Query: 372 EPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNIPYMRGSIDTLAQAK-VP 430
ND P KY+ + I G+G++ H + P+ + G++D LA + +P
Sbjct: 398 CANDPNATPEKYI---ELIDALRRGGAAVGGVGIQGHVSNPSGEVICGALDKLAASTGLP 454
Query: 431 IWLTEVDVK--PCKNQVEYLDEVMREGFAHPAVKGIVLWGAWHAKGCYVMCFTDNSFKNL 488
IW+TE+DV + + L+ V+RE +AHPAV G+VLWG + M D S +
Sbjct: 455 IWITELDVSEPDVSLRADDLEVVLREAYAHPAVAGVVLWGFMQGR----MWRQDASLVDA 510
Query: 489 P-----VGDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEYNATV 528
G + L +EWT+ G D G +HG Y V
Sbjct: 511 DGTVNEAGQRLVNLRREWTSDARGTIDGDGHFTFRGYHGTYVVQV 555
>AK108856
Length = 391
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 25/245 (10%)
Query: 238 FRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEK 297
F T EN +KW +TE + + +D +V A ++ LRGH + W Q WV +
Sbjct: 125 FGQITHENSLKWDATEPQRGTFTFTNADAVVNFATQNGKLLRGHTLLWHSQLPS--WVTQ 182
Query: 298 LG-VPELKEAMAKRLKDIVTRYAGKVIHWDVVNE------NLHFNFFEGKLGKDASAEIF 350
+ L + + +VTRY GK++ WDVVNE NL + F LG+D F
Sbjct: 183 INDRNTLTTVIQNHVTALVTRYKGKILQWDVVNEIFAEDGNLRDSVFSRVLGEDFVGIAF 242
Query: 351 RDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFA 410
+ D L++N++N D+A + + ++ GIG ++H A
Sbjct: 243 KAARAADPDAKLYINDYNL-----DSATYSKVTNGMVAHVNKWISQGIPIDGIGSQAHLA 297
Query: 411 AP-------NIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGFAHPAVKG 463
AP +P ++ +V I TE+D+ +YL VM A G
Sbjct: 298 APGGWNPASGVPNALKALAAANVKEVAI--TELDIAGASAN-DYL-TVMNACLAVSKCVG 353
Query: 464 IVLWG 468
I +WG
Sbjct: 354 ITVWG 358
>AK110530
Length = 400
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 238 FRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEK 297
F + EN MKW + E + Y +DK+V+ A ++ +RGH + W Q WV +
Sbjct: 134 FGQISPENSMKWDAVEPSRGSFSYGNADKVVDWALQNGKYMRGHTLLWHSQLPS--WVSQ 191
Query: 298 LG-VPELKEAMAKRLKDIVTRYAGKVIHWDVVNE------NLHFNFFEGKLGKDASAEIF 350
+ L + + +IVT Y GK++ WDVVNE +L + F LG+D F
Sbjct: 192 INDRNTLTTVIQNHITNIVTHYKGKILQWDVVNEIFAEDGSLRDSVFSRVLGEDFVGIAF 251
Query: 351 RDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFA 410
R D L++N++N + + A + T VA + + D GIG ++H A
Sbjct: 252 RAARAADPNAKLYINDYNL--DIANYAKVTTGMVAHVNKWVAAGIPID---GIGSQAHLA 306
Query: 411 AP 412
AP
Sbjct: 307 AP 308
>Os05g0298700 Similar to Xylan endohydrolase isoenzyme X-I (EC 3.2.1.8)
Length = 265
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 27/201 (13%)
Query: 362 LFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFAAPNI-PYMRGS 420
LF+N++N + ND P KYV + +R G H +P +R +
Sbjct: 70 LFVNDYNVLRG-NDPNATPEKYVELVDALRRGGAAVGGIGVQG---HMDSPVAGQVIRAA 125
Query: 421 IDTLAQAK-VPIWLTEVDVKP--CKNQVEYLDEVMREGFAHPAVKGIVLWG-----AWHA 472
+D LA A PIW+TE+DV + + L+ V+RE +AHPAV+G+VLWG W
Sbjct: 126 LDKLAAAGGAPIWITELDVSEPDVGLRADDLEVVLREAYAHPAVEGVVLWGFMEGQMWR- 184
Query: 473 KGCYVMCFTDNSFKNLPVGDAIDKLLKEWTAGHTGKTDSKGVLEVEIFHGEYNATVKHKE 532
+ Y++ D G +L +EW + G D G + FHG Y A V
Sbjct: 185 RDAYLV---DADGTVNEAGQRFLQLQREWRSDARGIVDGDGRFKFRGFHGTYVAQVTTAT 241
Query: 533 FK----------ENCMTLDLD 543
K +N + LDLD
Sbjct: 242 GKMLKTFTVEKGDNSLELDLD 262
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,585,195
Number of extensions: 907688
Number of successful extensions: 1893
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1853
Number of HSP's successfully gapped: 15
Length of query: 582
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 476
Effective length of database: 11,501,117
Effective search space: 5474531692
Effective search space used: 5474531692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 159 (65.9 bits)