Os01g0134800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment).
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Os01g0134800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.74 | 0.44 | 2.89 | -0.102 | 0.045 | 0.746 | 0.374 | -1.14 | 0.0146 | 18.9 | 54.38 | 4494 | -- | -- |
| 88.5 | 0.438 | 2.87 | -0.0176 | 0.0373 | 0.346 | 0.373 | -- | -0.00224 | 18.9 | 57.48 | 6195 | -- | -- |
| 87.7 | 0.436 | 2.9 | -0.143 | 0.0723 | 1.23 | -- | -2.25 | 0.0467 | 17.8 | 52.35 | 4509 | -- | -- |
| 88.8 | 0.439 | 2.88 | -0.0246 | 0.0587 | 0.358 | -- | -- | -0.00537 | 18.3 | 57.66 | 5801 | -- | -- |
| 87.6 | 0.436 | 2.92 | -0.207 | -- | 1.43 | -- | -2.67 | 0.00167 | -- | 51.34 | 4529 | -- | -- |
| 90.67 | 0.446 | 2.89 | 0.0372 | 0.0362 | -- | 0.402 | -- | -0.0592 | 19.8 | -- | -- | -- | -- |
| 91.03 | 0.447 | 2.89 | 0.0284 | 0.0585 | -- | -- | -- | -0.0577 | 16.7 | -- | -- | -- | -- |
| 88.95 | 0.439 | 2.87 | -0.0359 | -- | 0.354 | -- | -- | -0.00553 | -- | 57.54 | 5804 | -- | -- |
| 88.79 | 0.439 | 2.87 | -- | 0.0542 | 0.352 | -- | -- | 0.00125 | 17.8 | 58.29 | 5791 | -- | -- |
| 91.21 | 0.446 | 2.89 | 0.0262 | -- | -- | -- | -- | -0.0592 | -- | -- | -- | -- | -- |
| 91.05 | 0.446 | 2.89 | -- | 0.0579 | -- | -- | -- | -0.0609 | 16.7 | -- | -- | -- | -- |
| 88.97 | 0.439 | 2.87 | -- | -- | 0.35 | -- | -- | -0.00177 | -- | 58.14 | 5801 | -- | -- |
| 91.23 | 0.446 | 2.89 | -- | -- | -- | -- | -- | -0.0622 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.34 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 4 | 77.34 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 23 | 85.89 | wind | 3.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 24 | 85.89 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 42 | 85.90 | humidity | 50.0 | 30 | < th | dose independent | rect. | 12 | 3 |
| 45 | 85.91 | humidity | 50.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 111 | 85.97 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 1 |
| 131 | 86.02 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 229 | 86.11 | humidity | 50.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 247 | 86.12 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 339 | 86.36 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 391 | 86.44 | humidity | 50.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 395 | 86.58 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 421 | 86.71 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 422 | 86.73 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 424 | 86.74 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 8 |
| 425 | 86.74 | humidity | 50.0 | 10 | < th | dose dependent | sin | 13 | NA |
| 434 | 86.86 | humidity | 50.0 | 10 | < th | dose independent | sin | 14 | NA |
| 458 | 87.08 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 463 | 87.16 | wind | 3.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 469 | 87.19 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 479 | 87.19 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 495 | 87.29 | humidity | 50.0 | 90 | < th | dose independent | sin | 7 | NA |
| 496 | 87.30 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 497 | 87.31 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 504 | 87.44 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 514 | 87.44 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 527 | 87.50 | humidity | 50.0 | 10 | > th | dose independent | sin | 13 | NA |
| 533 | 87.60 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 538 | 87.62 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 542 | 87.66 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 544 | 87.67 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 582 | 87.69 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 583 | 87.70 | wind | 9.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 600 | 87.74 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 604 | 87.75 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 5 |
| 611 | 87.81 | wind | 1.0 | 720 | < th | dose independent | rect. | 6 | 2 |
| 617 | 87.84 | wind | 1.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 628 | 87.88 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 631 | 87.90 | wind | 1.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 633 | 87.91 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 640 | 87.94 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 17 | 18 |
| 642 | 87.96 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 17 | 18 |
| 644 | 87.97 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 16 | 20 |
| 645 | 87.98 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 647 | 87.99 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 20 |
| 674 | 88.06 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 703 | 88.07 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 721 | 88.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 736 | 88.10 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 746 | 88.13 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 4 |
| 748 | 88.13 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 14 |
| 770 | 88.15 | humidity | 60.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 771 | 88.15 | humidity | 60.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 773 | 88.15 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 799 | 88.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 804 | 88.17 | radiation | 40.0 | 90 | > th | dose independent | rect. | 12 | 2 |
| 824 | 88.18 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 854 | 88.22 | humidity | 60.0 | 720 | > th | dose independent | rect. | 20 | 15 |
| 855 | 88.22 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 856 | 88.22 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 867 | 88.25 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 868 | 88.25 | radiation | 30.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 905 | 88.26 | radiation | 40.0 | 90 | > th | dose independent | rect. | 12 | 21 |
| 910 | 88.27 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 946 | 88.29 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 19 | 4 |
| 963 | 88.30 | humidity | 50.0 | 10 | > th | dose independent | sin | 5 | NA |
| 964 | 88.30 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 970 | 88.30 | humidity | 50.0 | 10 | > th | dose independent | rect. | 21 | 22 |
| 972 | 88.31 | wind | 9.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 975 | 88.31 | wind | 5.0 | 10 | < th | dose independent | rect. | 15 | 10 |
| 980 | 88.32 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 981 | 88.32 | radiation | 1.0 | 720 | > th | dose independent | rect. | 4 | 1 |