Os10g0351700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tapetum specific protein (Tapetum-specific endoxylanase).
FiT-DB / Search/ Help/ Sample detail
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Os10g0351700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tapetum specific protein (Tapetum-specific endoxylanase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.65 | 0.366 | 2.83 | 0.137 | 0.0557 | 0.595 | 0.0197 | 2.34 | -0.047 | 8.69 | 5.567 | 355 | -- | -- |
| 63.73 | 0.375 | 2.8 | 0.0731 | 0.0533 | 0.131 | -0.22 | -- | -0.027 | 4.98 | 3.3 | 587 | -- | -- |
| 60.65 | 0.363 | 2.83 | 0.138 | 0.0554 | 0.593 | -- | 2.33 | -0.0468 | 8.8 | 5.554 | 355 | -- | -- |
| 63.47 | 0.371 | 2.81 | 0.11 | 0.063 | 0.261 | -- | -- | -0.0408 | 16.3 | 2.955 | 1035 | -- | -- |
| 60.81 | 0.363 | 2.84 | 0.136 | -- | 0.569 | -- | 2.35 | -0.0503 | -- | 5.591 | 355 | -- | -- |
| 64.64 | 0.377 | 2.8 | 0.0356 | 0.0527 | -- | 0.14 | -- | -0.0228 | 17.4 | -- | -- | -- | -- |
| 64.68 | 0.377 | 2.8 | 0.0356 | 0.0548 | -- | -- | -- | -0.022 | 16.5 | -- | -- | -- | -- |
| 63.7 | 0.372 | 2.81 | 0.101 | -- | 0.302 | -- | -- | -0.0502 | -- | 3 | 1293 | -- | -- |
| 63.6 | 0.371 | 2.81 | -- | 0.075 | 0.273 | -- | -- | -0.0327 | 14 | 3 | 1035 | -- | -- |
| 64.84 | 0.376 | 2.8 | 0.0334 | -- | -- | -- | -- | -0.0235 | -- | -- | -- | -- | -- |
| 64.71 | 0.376 | 2.8 | -- | 0.0542 | -- | -- | -- | -0.026 | 16.5 | -- | -- | -- | -- |
| 63.95 | 0.372 | 2.81 | -- | -- | 0.259 | -- | -- | -0.055 | -- | 2.901 | 1293 | -- | -- |
| 64.87 | 0.376 | 2.8 | -- | -- | -- | -- | -- | -0.0272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.69 | temperature | 20 | 90 | < th | dose independent | rect. | 8 | 11 |
| 2 | 51.02 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 4 | 51.02 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 10 | 51.14 | temperature | 20 | 90 | < th | dose independent | rect. | 13 | 6 |
| 32 | 51.29 | temperature | 20 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 36 | 51.35 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 1 |
| 37 | 51.35 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 4 |
| 39 | 51.35 | temperature | 20 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 40 | 51.35 | temperature | 20 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 149 | 53.48 | wind | 5 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 190 | 55.56 | wind | 5 | 90 | > th | dose independent | rect. | 18 | 1 |
| 195 | 56.07 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 196 | 56.08 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 199 | 56.44 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 204 | 56.60 | wind | 5 | 90 | > th | dose dependent | rect. | 18 | 5 |
| 219 | 56.95 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 225 | 57.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 255 | 57.46 | temperature | 25 | 10 | < th | dose independent | rect. | 13 | 1 |
| 276 | 57.77 | wind | 7 | 10 | < th | dose independent | sin | 11 | NA |
| 346 | 58.37 | wind | 5 | 90 | > th | dose independent | rect. | 18 | 5 |
| 356 | 58.55 | wind | 7 | 720 | > th | dose independent | rect. | 8 | 1 |
| 360 | 58.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 372 | 58.75 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 387 | 58.84 | wind | 5 | 90 | > th | dose dependent | rect. | 12 | 2 |
| 390 | 58.85 | temperature | 20 | 90 | > th | dose independent | sin | 21 | NA |
| 411 | 58.99 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 424 | 59.08 | wind | 7 | 90 | > th | dose independent | rect. | 12 | 1 |
| 427 | 59.13 | temperature | 20 | 90 | < th | dose independent | sin | 21 | NA |
| 429 | 59.14 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 431 | 59.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 445 | 59.21 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 472 | 59.21 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 509 | 59.31 | wind | 5 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 548 | 59.45 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 599 | 59.79 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 604 | 59.83 | wind | 5 | 720 | > th | dose independent | rect. | 8 | 6 |
| 605 | 59.83 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 611 | 59.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 628 | 59.93 | humidity | 80 | 30 | < th | dose independent | rect. | 18 | 7 |
| 633 | 59.96 | humidity | 60 | 30 | < th | dose independent | rect. | 18 | 1 |
| 677 | 60.07 | humidity | 80 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 679 | 60.07 | wind | 7 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 715 | 60.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 5 |
| 725 | 60.19 | wind | 7 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 738 | 60.21 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 744 | 60.23 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 750 | 60.23 | humidity | 60 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 751 | 60.23 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 795 | 60.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 814 | 60.32 | wind | 7 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 836 | 60.36 | radiation | 1 | 30 | > th | dose independent | rect. | 18 | 1 |
| 855 | 60.37 | wind | 5 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 872 | 60.38 | humidity | 90 | 30 | < th | dose dependent | rect. | 18 | 6 |
| 880 | 60.40 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 882 | 60.40 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 890 | 60.41 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 940 | 60.44 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 969 | 60.47 | wind | 5 | 10 | > th | dose independent | rect. | 13 | 1 |