BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0194300 Os03g0194300|J075156H17
(417 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0194300 DOMON related domain containing protein 622 e-178
Os03g0194900 DOMON related domain containing protein 167 1e-41
Os08g0524200 DOMON related domain containing protein 159 4e-39
Os05g0556400 DOMON related domain containing protein 92 8e-19
Os01g0680900 DOMON related domain containing protein 92 8e-19
Os09g0500900 Cytochrome b561 / ferric reductase transmembra... 76 4e-14
Os01g0895300 Cytochrome b561 / ferric reductase transmembra... 75 1e-13
Os03g0194600 DOMON related domain containing protein 73 4e-13
Os08g0335600 DOMON related domain containing protein 70 2e-12
AK105009 70 2e-12
Os05g0237200 DOMON related domain containing protein 69 5e-12
>Os03g0194300 DOMON related domain containing protein
Length = 417
Score = 622 bits (1603), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/401 (79%), Positives = 318/401 (79%)
Query: 1 MRQQRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCTTSTPLKTYAKCIALPTQG 60
MRQQRC RCTTSTPLKTYAKCIALPTQG
Sbjct: 1 MRQQRCATLLASLLQLVAVAVLPAAAAAAAAAAAGGAAGRCTTSTPLKTYAKCIALPTQG 60
Query: 61 ATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLAAFSDPSTGALLAL 120
ATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLAAFSDPSTGALLAL
Sbjct: 61 ATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLAAFSDPSTGALLAL 120
Query: 121 PFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIAATIRLSPNRTKLH 180
PFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIAATIRLSPNRTKLH
Sbjct: 121 PFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIAATIRLSPNRTKLH 180
Query: 181 FVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXXXXXXLQWTHGSLNALSWG 240
FVWNRGLYVQGYSPTIHPTDASDLASHATVDIL LQWTHGSLNALSWG
Sbjct: 181 FVWNRGLYVQGYSPTIHPTDASDLASHATVDILTTATEASPTASATLQWTHGSLNALSWG 240
Query: 241 FLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXXXXXSASPGVTYKLH 300
FLLPVGAAVARYLRPCASTGPAWFYAHAAIQ SASPGVTYKLH
Sbjct: 241 FLLPVGAAVARYLRPCASTGPAWFYAHAAIQATGYALGAAGFALGLVMGSASPGVTYKLH 300
Query: 301 RGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXXXXXXXXXXXXXXXMGL 360
RGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHL MGL
Sbjct: 301 RGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLVGYGCVVVGVVNVFQGFEVMGL 360
Query: 361 GASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEEKLM 401
GASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEEKLM
Sbjct: 361 GASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEEKLM 401
>Os03g0194900 DOMON related domain containing protein
Length = 384
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 151/353 (42%), Gaps = 16/353 (4%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLA 107
+T+ KC LP GA+L WT+ A N T D AF S SGWVAWG+N M G+ V
Sbjct: 33 QTFLKCNPLPVLGASLHWTHHAENGTADVAFRAPQQS-SGWVAWGINTRGTTMPGSSVFI 91
Query: 108 AFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIA 167
A D S + + L + L L S ++ P TI
Sbjct: 92 ASQDGSGSVSVLMTVLENTSPSLTNGSL------------SFDVLSPPTADYTNGVYTIF 139
Query: 168 ATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXXXXXXL 227
ATI L N T + VW G G + H T ++ S +D
Sbjct: 140 ATIALPNNSTTQNTVWQAGPGSTG-NVGQHATSGPNVQSMLRLDFSSGQSTGTASNSRLH 198
Query: 228 QWT-HGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXX 286
+ HG LNA+SWG L+P+GA +ARYLR + PAWFY H Q
Sbjct: 199 RRNIHGILNAVSWGILIPMGAMIARYLRVFEAADPAWFYLHITCQLSGYILGVAGWALGL 258
Query: 287 XXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXXXX 346
S S G+TY HR +GIA +LQ A+L RP N+YR YW YHH
Sbjct: 259 KLGSESKGITYSAHRNIGIAIFCLATLQVFALLLRPDKKNKYRFYWNIYHHSVGYSAIVL 318
Query: 347 XXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEEK 399
+ AS WK Y LATLAG + LE WV+ RR++ +K
Sbjct: 319 AAVNIFKGLDILK-PASGWKRSYIAILATLAGVALLLEAITWVIVLRRKKSDK 370
>Os08g0524200 DOMON related domain containing protein
Length = 390
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 155/355 (43%), Gaps = 17/355 (4%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAA-FTGSFISPSGWVAWGVNKDAPAMTGARVL 106
+ YA C LP GA++ WTYDA + + F + SP GWVAWG+N M G
Sbjct: 35 RVYAACSDLPHLGASVHWTYDAAASASLSVAFVAAPPSPGGWVAWGLNPTGGGMAG---- 90
Query: 107 AAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTI 166
T AL+ALP ++Q + L P + A DG V++
Sbjct: 91 -------TQALVALPKGGGGGYEVQTFDIEGYSLSAPGKLKYPATDLAAEVAADG-RVSV 142
Query: 167 AATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXXXXXX 226
+ L +++ VW G G S H + + A+ +++L
Sbjct: 143 FGKLALQNGTAEVNQVWQVGPVSSG-SMVPHAMSSDNKAAMGKLNLLTGAATSSGGGGSN 201
Query: 227 L--QWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXX 284
L + THG LNA+SWG LLP+GA ARYL+ S PAWFY H A Q
Sbjct: 202 LRKKNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWAT 261
Query: 285 XXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXX 344
+ S G+TY LHR +GI G+LQ A+ RPK ++YR YW +YHH
Sbjct: 262 GIHLGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTII 321
Query: 345 XXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEEK 399
+ + WK GY + ++ L G V LE W + +R++EE
Sbjct: 322 ILGIVNIFKGMSILNV-EQKWKTGYIITISILGGIAVILEAVTWSIVLKRRKEEN 375
>Os05g0556400 DOMON related domain containing protein
Length = 369
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 130/347 (37%), Gaps = 23/347 (6%)
Query: 41 CTTSTP---LKTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDA 97
C T P + Y+ P + + +N L S + +GWV G ++D
Sbjct: 26 CNTELPGVLVGNYSGLNCQPVWNNFVLRYHQDKNNVLRVVL--STMYSTGWVGMGFSRDG 83
Query: 98 PAMTGARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPART 157
M G+ + + LP + ++ + S V ++ L S+++ D
Sbjct: 84 -LMVGSSAMVGWIGRK-----GLPHVKQFALRGKTSGKVV--VNRGFLVSNSNNHDHTVV 135
Query: 158 VRDGATVTIAATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXX 217
V+ A + +A ++ S T H + G + P + + T D
Sbjct: 136 VQQ-ARIYLAFQLQFSYRLTHQHIILAFGSSI----PVNNKLTKHQDKTSFTFDFTTGKA 190
Query: 218 XXXXXXXXXLQWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXX 277
L+ HG+LN +WG L+P+GA +ARY R P WFY H +Q
Sbjct: 191 FVDGSFPYGLRRAHGALNLFAWGVLMPIGAILARYFR---RMDPLWFYLHVGVQFVAFII 247
Query: 278 XXXXXXXXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHH 337
+ HRGLGI G LQ LA RP T ++YRKYW YHH
Sbjct: 248 GLAGVVAGVALYNKIQA-DIPAHRGLGIFILVLGILQILAFFLRPNTDSKYRKYWNWYHH 306
Query: 338 LXXXXXXXXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALE 384
+G G + WK+GY LA + + LE
Sbjct: 307 W-SGRLVLFFAAVNIVLGIHVGGGDNSWKIGYGFNLAIILLAVIGLE 352
>Os01g0680900 DOMON related domain containing protein
Length = 335
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 227 LQWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXX 286
L+ HG+LN +WG LLP+GA +ARY C P WFY HA IQ
Sbjct: 165 LKRAHGALNLFAWGVLLPIGAIIARY---CRRWDPLWFYLHAGIQLVGFILGLAGIVAGV 221
Query: 287 XXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXXXX 346
+ HRGLGI G LQ LA RP ++YRKYW YHH
Sbjct: 222 SLYNKIQ-ADVPAHRGLGIFVLVLGILQILAFFLRPHKDSKYRKYWNWYHHW-VGRLALF 279
Query: 347 XXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAW 388
+G + WK+GY LA L + LEV W
Sbjct: 280 FAAINIVLGIKVGAAGNSWKIGYGFNLAILLITIITLEVLLW 321
>Os09g0500900 Cytochrome b561 / ferric reductase transmembrane domain containing
protein
Length = 148
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 194 PTIHPTDASDLASHATVDILXXXXXXXXXXXXXLQWTHGSLNALSWGFLLPVGAAVARYL 253
P+IHP++ + + + +I + HG LNA+SWG LLP+GA +ARYL
Sbjct: 17 PSIHPSNRIEFSPN---NIAKTFKNQSHFNFFGHEKIHGLLNAVSWGILLPMGAILARYL 73
Query: 254 RPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXXXXXSASPGVTYKLHRGLGIAAATAGSL 313
+ S PAWFY H + Q + S G+TY LHR +GI G+L
Sbjct: 74 KTFRSADPAWFYLHVSCQLIGYGVGVAGWATGINLGNMSNGITYTLHRNIGIIVFALGTL 133
Query: 314 QT 315
Q
Sbjct: 134 QV 135
>Os01g0895300 Cytochrome b561 / ferric reductase transmembrane domain containing
protein
Length = 278
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 231 HGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXXXXXS 290
HG++ L WG L+PVG A+ARY + P WFYAH ++Q
Sbjct: 121 HGAMAGLGWGVLMPVGIALARYFK---KHDPFWFYAHISVQGVGFVLGVAGVVAGFKLND 177
Query: 291 ASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHH 337
PG H+ +GI G LQ LA L RP +++ R+YW YHH
Sbjct: 178 DVPGG--DTHQAIGITVLVLGCLQVLAFLARPDKSSKVRRYWNWYHH 222
>Os03g0194600 DOMON related domain containing protein
Length = 193
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLA 107
+TY +C LP GA+L WTY N T D AF S GWVAWG+N M G+ V
Sbjct: 35 RTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQGAGMVGSSVFI 94
Query: 108 AFSDPSTGALLALPFLLSPDVKLQASPLVSRPL--DIPLLASSASLVDPARTVRDGATVT 165
A +TGA +++ ++ + L + L D+P PA GA T
Sbjct: 95 ASQINATGAGAGGVSVVTTVLESFSPSLRNGTLRFDVP--------APPAAEYSAGA-YT 145
Query: 166 IAATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 212
I AT+ L N T + VW G V+G + +HPT ++L S D
Sbjct: 146 IYATVALPGNSTTQNMVWQAGP-VRGGAIAMHPTTGANLRSTKKHDF 191
>Os08g0335600 DOMON related domain containing protein
Length = 204
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTG-SFISPSGWVAWGVNKDAPAMTGARVL 106
+ Y C LP GATL + Y A +T+ AF GWVAWG+N M G + +
Sbjct: 44 QQYGSCATLPRLGATLHYNYTAAASTVAVAFRAPQPAGGKGWVAWGINPSGSGMVGTQAV 103
Query: 107 AAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTI 166
AF S G+L+A P +L A P ++ L +P+ SA A+ V ATV +
Sbjct: 104 VAFRH-SNGSLVAYPTVLGSYAPSMA-PAAAKDLALPVSGVSAEENGKAKEVVVYATVAL 161
Query: 167 AATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 212
A TK + VW +G V G P HPT ++ S ++D
Sbjct: 162 PAG-----KGTKFNHVWQQGSSVAGDVPAAHPTSGDNVLSVGSIDF 202
>AK105009
Length = 204
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTG-SFISPSGWVAWGVNKDAPAMTGARVL 106
+ Y C LP GATL + Y A +T+ AF GWVAWG+N M G + +
Sbjct: 44 QQYGSCATLPRLGATLHYNYTAAASTVAVAFRAPQPAGGKGWVAWGINPSGSGMVGTQAV 103
Query: 107 AAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTI 166
AF S G+L+A P +L A P ++ L +P+ SA A+ V ATV +
Sbjct: 104 VAFRH-SNGSLVAYPTVLGSYAPSMA-PAAAKDLALPVSGVSAEENGKAKEVVVYATVAL 161
Query: 167 AATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 212
A TK + VW +G V G P HPT ++ S ++D
Sbjct: 162 PAG-----KGTKFNHVWQQGSSVAGDVPAAHPTSGDNVLSVGSIDF 202
>Os05g0237200 DOMON related domain containing protein
Length = 487
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 99/269 (36%), Gaps = 54/269 (20%)
Query: 86 SGWVAWGVNKDAPAMTGARVLAAFSDPSTGALLALPFL---LSPDVKLQASPLVSRPLDI 142
SGWV G + D M G+ + + D A + +L S VK+ L++ D+
Sbjct: 184 SGWVGIGFSNDG-KMVGSSAMVGWIDNQGRAYIKQYYLSNQTSSGVKVDEGKLLTT--DV 240
Query: 143 P----LLASSASLVDPAR-TVRDGATVTIAATIRLSPNR---------TKLHFVWNRGLY 188
P L + LV + + I A ++SPN+ T L F ++ G
Sbjct: 241 PSAAVLYGDNIYLVFQVKFPLHIARQSVILAFSKISPNKFHLAEHDDKTTLSFDFSSGDS 300
Query: 189 VQGYSPTIHPTDASDLASHATVDILXXXXXXXXXXXXXLQWTHGSLNALSWGFLLPVGAA 248
V Y P L+ HG+ WG L+P+GA
Sbjct: 301 VSTYYP------------------------------YQLKRNHGAFAIFGWGVLVPLGAI 330
Query: 249 VARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXXXXXSASPGVTYKLHRGLGIAAA 308
ARYLR P W+Y H +Q + + + HR LGI+
Sbjct: 331 AARYLR---HKDPLWYYLHVLVQFLGYIIGFAGVVSGIALYNRTYS-NFTTHRSLGISVL 386
Query: 309 TAGSLQTLAMLFRPKTTNRYRKYWKSYHH 337
GSLQ +A P ++ RK W YHH
Sbjct: 387 ALGSLQVIAFFLHPNKDSQVRKCWNQYHH 415
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.132 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,387,364
Number of extensions: 406800
Number of successful extensions: 1046
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1018
Number of HSP's successfully gapped: 12
Length of query: 417
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 314
Effective length of database: 11,657,759
Effective search space: 3660536326
Effective search space used: 3660536326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)