BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0146100 Os03g0146100|AK060994
(196 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0146100 Similar to Tonoplast intrinsic protein 295 2e-80
Os01g0975900 Similar to Tonoplast membrane integral protein... 179 1e-45
Os02g0658100 Similar to Tonoplast membrane integral protein... 139 1e-33
Os04g0550950 Major intrinsic protein family protein 129 9e-31
Os10g0492600 Similar to Tonoplast membrane integral protein... 128 3e-30
Os01g0232000 Major intrinsic protein family protein 92 2e-19
Os05g0231700 Similar to Tonoplast membrane integral protein... 89 3e-18
Os04g0527900 Similar to Tonoplast membrane integral protein... 89 3e-18
Os04g0550800 Major intrinsic protein family protein 85 4e-17
Os01g0232100 Similar to Tonoplast membrane integral protein... 82 2e-16
Os06g0336200 Similar to Delta tonoplast intrinsic protein TIP2 75 4e-14
>Os03g0146100 Similar to Tonoplast intrinsic protein
Length = 196
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/196 (79%), Positives = 155/196 (79%)
Query: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXX 60
MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKL
Sbjct: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIA 60
Query: 61 XXXXXXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFL 120
GANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFL
Sbjct: 61 AAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFL 120
Query: 121 LRFSXXXXXXXXXXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIGGGLAGVIYE 180
LRFS VSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIGGGLAGVIYE
Sbjct: 121 LRFSTGGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIGGGLAGVIYE 180
Query: 181 VLFISHTHEQLPTTDY 196
VLFISHTHEQLPTTDY
Sbjct: 181 VLFISHTHEQLPTTDY 196
>Os01g0975900 Similar to Tonoplast membrane integral protein ZmTIP1-2
Length = 252
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Query: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXX 60
MP+ IAVG+ E+ HP KAA+AEFIS LIFVFAG GSGMAFSKL
Sbjct: 1 MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIA 60
Query: 61 XXXXXXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFL 120
GANISGGHVNPAVTFGAFVGGNI+L + ++YW+AQLLGS VAC L
Sbjct: 61 ASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLL 120
Query: 121 LRFSXXXXXXXX-XXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIG 171
L+ + V W A+V EIVMTFGLVYTVYATAVDPKKG +G
Sbjct: 121 LKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLG 172
>Os02g0658100 Similar to Tonoplast membrane integral protein ZmTIP2-1
Length = 248
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 101/167 (60%)
Query: 5 NIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXXXXXX 64
+A GS + + ++KA +AEFI+TL+FVFAG GS +A+ +L
Sbjct: 3 KLAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIA 62
Query: 65 XXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFS 124
ANISGGH+NPAVTFG VGG+IT+ GL YWIAQLLG+++AC LL+F
Sbjct: 63 HALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFV 122
Query: 125 XXXXXXXXXXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIG 171
+S E +V+EIV+TF LVYTVYATA DPKKGS+G
Sbjct: 123 THGKAIPTHGVAGISELEGVVMEIVITFALVYTVYATAADPKKGSLG 169
>Os04g0550950 Major intrinsic protein family protein
Length = 249
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Query: 5 NIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXXXXXX 64
+A GS + + ++KA +AEFI+TL+FVFAG GS +A+ +L
Sbjct: 3 KLAFGSCGDSFSASSIKAYVAEFIATLLFVFAGVGSAIAYGQLTKGGALDPAGLVAIAIA 62
Query: 65 XXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFS 124
ANISGGH+NP VTFG VGG+IT+ G+ YW+AQLLG++VAC L
Sbjct: 63 HAFALFVGVSMAANISGGHLNPVVTFGLAVGGHITILTGIFYWVAQLLGASVACLLCSSP 122
Query: 125 XXXXXXXXX-XXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIG 171
+S E +V+EIV+TF LVYTVYATA DPKKGS+G
Sbjct: 123 PTDRLAIPTHAIAGISEIEGMVMEIVITFALVYTVYATAADPKKGSLG 170
>Os10g0492600 Similar to Tonoplast membrane integral protein ZmTIP3-1
Length = 264
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 2/171 (1%)
Query: 2 PIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXXX 61
P R VG ++ HP ++AA++EF++T IFVFA +GS ++ KL
Sbjct: 8 PGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVS 67
Query: 62 XXXXXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLL 121
NISGGHVNPA+TFGA +GG ++L R L YW+AQLLG+ VA LL
Sbjct: 68 LAHALALAVAVAVA-VNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLL 126
Query: 122 RFSXXXXXXXX-XXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIG 171
R + V W A++LE MTFGL+Y YAT +DPK+G +G
Sbjct: 127 RLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVG 177
>Os01g0232000 Major intrinsic protein family protein
Length = 251
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 5/180 (2%)
Query: 3 IRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXXXX 62
+ +A+G H+E PG L+A +AE + T +FVF+G GS MA +KL
Sbjct: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTAVAA 60
Query: 63 XXXXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLR 122
G ++SGGH+NPAVT G GG+ITLFR LY AQLLGS++AC LL
Sbjct: 61 AHALVVAVMVSA-GLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLA 119
Query: 123 FSXXXXXXXX--XXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKK--GSIGGGLAGVI 178
V A+ +E V+TF L++ VYAT VD ++ G++G L G++
Sbjct: 120 ALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLV 179
>Os05g0231700 Similar to Tonoplast membrane integral protein ZmTIP4-2
Length = 251
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Query: 4 RNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFS-KLXXXXXXXXXXXXXXX 62
+ + H EV G ++A LAE + T +FVF G + MA
Sbjct: 3 KEVDPCDHGEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVA 62
Query: 63 XXXXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLR 122
G ++SGGH+NPAVT G+IT FR LY AQLL S++AC LLR
Sbjct: 63 IATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLR 122
Query: 123 F-SXXXXXXXXXXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIGGG 173
+ + + + LV+EI++TF L++ VYAT +DP+ G G
Sbjct: 123 YLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPGFG 174
>Os04g0527900 Similar to Tonoplast membrane integral protein ZmTIP3-2
Length = 265
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 17 PGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 76
PGA +AAL+EF++T +FVFA +GS K+
Sbjct: 25 PGATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVS- 83
Query: 77 ANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQ-LLGSTVACFLLRFSXXXXXXXXXXX 135
N SGGHVNPAVTFG VG I+ R LYW AQ L L S
Sbjct: 84 RNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLG 143
Query: 136 XXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIGGGLA 175
+ AL+LE+VMTFGLVYTVYATAVD + G GG +A
Sbjct: 144 HRIHERHALLLEVVMTFGLVYTVYATAVDRRSG--GGDIA 181
>Os04g0550800 Major intrinsic protein family protein
Length = 269
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 12 QEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXXXXXXXXXXXXX 71
+ + P AL+A AEF ST +FVF GS ++ L
Sbjct: 9 KRCFSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFA 68
Query: 72 XXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRF-SXXXXXX 130
A++SGGHVNPAVTF +GG+IT+ + YW +Q+LGST AC +L + S
Sbjct: 69 AVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVP 128
Query: 131 XXXXXXXVSVWEALVLEIVMTFGLVYTVY 159
++ + A +LE V+TF +VYTV+
Sbjct: 129 TTRIAVEMTGFGAGILEGVLTFMVVYTVH 157
>Os01g0232100 Similar to Tonoplast membrane integral protein ZmTIP4-3
Length = 256
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 1 MPIRNIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLXXXXXXXXXXXXX 60
+P+ + +G E + PG L+A E + T +FVF G S + K
Sbjct: 4 LPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGK-AAGGAGEAAAVTA 62
Query: 61 XXXXXXXXXXXXXXXGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFL 120
G ++SGGH+NPAVT VGG+ITLFR LY AQL GS++AC L
Sbjct: 63 AAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLL 122
Query: 121 LR-FSXXXXXXXXXXXXXVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSIGG 172
LR + V + + E V TF L+ + AT +DP++ + G
Sbjct: 123 LRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPG 175
>Os06g0336200 Similar to Delta tonoplast intrinsic protein TIP2
Length = 155
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 96 GNITLFRGLLYWIAQLLGSTVACFLLRFSXXXXXXXXXXXXXVSVWEALVLEIVMTFGLV 155
G IT+ G+ YWIAQLLG+ V L++F V +E +V+EI++TFGLV
Sbjct: 2 GQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSG-VGAFEGVVMEIIVTFGLV 60
Query: 156 YTVYATAVDPKKGSIG 171
YTVYATA DPKKGS+G
Sbjct: 61 YTVYATAADPKKGSLG 76
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,279,153
Number of extensions: 154035
Number of successful extensions: 510
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 496
Number of HSP's successfully gapped: 15
Length of query: 196
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 100
Effective length of database: 12,023,257
Effective search space: 1202325700
Effective search space used: 1202325700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)