BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0769700 Os02g0769700|AK111328
(220 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0769700 Protein kinase-like domain containing protein 322 2e-88
Os03g0703400 Similar to MAP3K beta 3 protein kinase (EC 2.7... 102 3e-22
Os02g0666300 Similar to MAP3Ka 82 4e-16
Os11g0207200 Similar to MAP3Ka 80 1e-15
Os04g0437600 Protein kinase domain containing protein 76 2e-14
Os04g0559800 Similar to YDA 75 3e-14
Os02g0555900 Similar to MAP3Ka 74 1e-13
Os07g0119000 Similar to MAP3K gamma protein kinase (Fragment) 70 9e-13
Os03g0764300 Protein kinase-like domain containing protein 67 7e-12
>Os02g0769700 Protein kinase-like domain containing protein
Length = 220
Score = 322 bits (824), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/204 (81%), Positives = 166/204 (81%)
Query: 17 NAIRQSAYVARPASQLSPPSESDQPAFWYSTEESVLEERVVXXXXXXXXXXXXXXXXXXX 76
NAIRQSAYVARPASQLSPPSESDQPAFWYSTEESVLEERVV
Sbjct: 17 NAIRQSAYVARPASQLSPPSESDQPAFWYSTEESVLEERVVEDEVGDHAEAGGAEAAALV 76
Query: 77 XXXXXXXXXXXXXXXXXXXIRRSILNWSKLDLIGAGSSGRVYKAVAEDGFVFAVKEASLI 136
IRRSILNWSKLDLIGAGSSGRVYKAVAEDGFVFAVKEASLI
Sbjct: 77 VEEASTSSSSAVSVHAAMVIRRSILNWSKLDLIGAGSSGRVYKAVAEDGFVFAVKEASLI 136
Query: 137 GPESYTKQTACQLKQEILLLSRLEHKNIVQYFGAKMGETVLCIFLEFVSEGSLVSVYEKQ 196
GPESYTKQTACQLKQEILLLSRLEHKNIVQYFGAKMGETVLCIFLEFVSEGSLVSVYEKQ
Sbjct: 137 GPESYTKQTACQLKQEILLLSRLEHKNIVQYFGAKMGETVLCIFLEFVSEGSLVSVYEKQ 196
Query: 197 QLEESTISSLYKTDPQWIGLSASS 220
QLEESTISSLYKTDPQWIGLSASS
Sbjct: 197 QLEESTISSLYKTDPQWIGLSASS 220
>Os03g0703400 Similar to MAP3K beta 3 protein kinase (EC 2.7.1.37) (Fragment)
Length = 654
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 96 IRRSILNWSKLDLIGAGSSGRVYKAVAEDGFVFAVKEASLIGPESYTKQTACQLKQEILL 155
+R I +W + L+G+GS G VY+ ++++G FAVKE SL+ S +Q+ L+QEI L
Sbjct: 375 FKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFAVKEVSLLDQGSNAQQSILALEQEIAL 434
Query: 156 LSRLEHKNIVQYFGAKMGETVLCIFLEFVSEGSLVSVYEKQQLEESTISSLYK 208
LS+ EH+NIVQY+G E+ L IF+E V++GSL S+Y+K +L +S +S+ +
Sbjct: 435 LSQFEHENIVQYYGTDKEESKLYIFIELVTQGSLSSLYQKYKLRDSQVSAYTR 487
>Os02g0666300 Similar to MAP3Ka
Length = 894
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 103 WSKLDLIGAGSSGRVYKAVAED-GFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W K L+G G+ G VY D G + A+KE +L + +K++A QL QEILLL+RL+H
Sbjct: 409 WKKGKLVGRGTFGHVYIGFNSDKGEMCAMKEVTLFSDDPKSKESAKQLCQEILLLNRLQH 468
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSLVSVY-EKQQLEESTISSLYK 208
NIV+Y+G++M + L I+LE+VS GS+ + E Q E I S K
Sbjct: 469 PNIVRYYGSEMVDDKLYIYLEYVSGGSIHKLLQEYGQFGEPAIRSYTK 516
>Os11g0207200 Similar to MAP3Ka
Length = 554
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 103 WSKLDLIGAGSSGRVYKAV-AEDGFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W K L+G+G+ G+VY+ +E G + A+KE +I +S +K+ QL QEI+LLS+L H
Sbjct: 148 WKKGKLLGSGTFGQVYQGFNSEGGQMCAIKEVKVISDDSNSKECLRQLHQEIVLLSQLSH 207
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSL 189
NIVQY+G+ + L ++LE+VS GS+
Sbjct: 208 PNIVQYYGSDLSSETLSVYLEYVSGGSI 235
>Os04g0437600 Protein kinase domain containing protein
Length = 708
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 103 WSKLDLIGAGSSGRVYKAV-AEDGFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W K L+G+G+ G+VY +E+G A+KE +I + ++K+ QL QEI +L +L H
Sbjct: 304 WKKGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVISDDPHSKERLKQLNQEIDMLRQLSH 363
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSL 189
NIVQY+G++M + L I+LEFVS GS+
Sbjct: 364 PNIVQYYGSEMTDDALSIYLEFVSGGSI 391
>Os04g0559800 Similar to YDA
Length = 894
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 103 WSKLDLIGAGSSGRVYKAVAED-GFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W K LIG G+ G VY D G + A+KE +L + +K++A QL QEI LLSRL+H
Sbjct: 409 WKKGKLIGRGTFGHVYVGFNSDSGEMCAMKEVTLFLDDPKSKESAKQLGQEISLLSRLQH 468
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSLVSVY-EKQQLEESTISS 205
NIVQY+G++ + L I+LE+VS GS+ + E QL E I S
Sbjct: 469 PNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQLGEQAIRS 513
>Os02g0555900 Similar to MAP3Ka
Length = 690
Score = 73.6 bits (179), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 103 WSKLDLIGAGSSGRVYKAV-AEDGFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W + L+G+G+ G+VY +E+G A+KE + +S++K+ QL QEI +L +L H
Sbjct: 280 WKRGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVFLDDSHSKERLRQLNQEIDMLKQLSH 339
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSL 189
+NIVQY+G+++ + L I+LE+VS GS+
Sbjct: 340 QNIVQYYGSELADEALSIYLEYVSGGSI 367
>Os07g0119000 Similar to MAP3K gamma protein kinase (Fragment)
Length = 753
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 103 WSKLDLIGAGSSGRVYKAVA-EDGFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W K L+G+G+ G VY+A + G + A+KE ++I ++ + ++ QL+QEI LS+ +H
Sbjct: 376 WQKGRLLGSGTFGCVYEATNRQTGALCAMKEVNIIPDDAKSAESLKQLEQEIKFLSQFKH 435
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSLVSVYEKQQ---LEESTISSLYK 208
+NIVQY+G+ E I+LE+V GS ++ Y KQ + ES + + +
Sbjct: 436 ENIVQYYGSDTFEDRFYIYLEYVHPGS-INKYVKQHYGAMTESVVRNFTR 484
>Os03g0764300 Protein kinase-like domain containing protein
Length = 777
Score = 67.4 bits (163), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 103 WSKLDLIGAGSSGRVYKAV-AEDGFVFAVKEASLIGPESYTKQTACQLKQEILLLSRLEH 161
W K LIG+G+ G VY+A G + A+KE ++I ++ + ++ QL+QEI LS+ +H
Sbjct: 387 WQKGKLIGSGTFGCVYEAANRHTGALCAMKEVNIIPDDAKSAESLKQLEQEIKFLSQFKH 446
Query: 162 KNIVQYFGAKMGETVLCIFLEFVSEGSLVSVYEKQQ---LEESTISSLYK 208
+NIVQY+G++ E I+LE+V GS ++ Y Q + ES I S +
Sbjct: 447 ENIVQYYGSEYIEDRFYIYLEYVHPGS-INKYVNQHCGAMTESVIRSFTR 495
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,152,030
Number of extensions: 151045
Number of successful extensions: 1826
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1938
Number of HSP's successfully gapped: 9
Length of query: 220
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 123
Effective length of database: 11,971,043
Effective search space: 1472438289
Effective search space used: 1472438289
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 154 (63.9 bits)