Os03g0764300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os03g0764300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.51 | 0.235 | 10.4 | 0.273 | 0.256 | 3.18 | -0.0593 | -7.11 | 0.234 | 2.72 | 0.1 | 90 | -- | -- |
| 26.29 | 0.239 | 10.4 | 0.361 | 0.26 | 1.24 | 0.0462 | -- | 0.247 | 2.7 | 1.5 | 92 | -- | -- |
| 25.52 | 0.235 | 10.4 | 0.274 | 0.256 | 3.2 | -- | -7.19 | 0.235 | 2.72 | 0.0529 | 90 | -- | -- |
| 25.81 | 0.237 | 10.4 | 0.318 | 0.258 | 1.31 | -- | -- | 0.228 | 2.81 | 0.8706 | 160 | -- | -- |
| 29.33 | 0.252 | 10.4 | 0.284 | -- | 3.19 | -- | -7.17 | 0.241 | -- | 0.07272 | 90 | -- | -- |
| 28.78 | 0.251 | 10.4 | 0.355 | 0.253 | -- | -0.0771 | -- | 0.221 | 2.53 | -- | -- | -- | -- |
| 28.8 | 0.251 | 10.4 | 0.357 | 0.253 | -- | -- | -- | 0.221 | 2.49 | -- | -- | -- | -- |
| 29.67 | 0.254 | 10.4 | 0.329 | -- | 1.28 | -- | -- | 0.235 | -- | 0.9251 | 160 | -- | -- |
| 28.43 | 0.248 | 10.4 | -- | 0.268 | 1.45 | -- | -- | 0.193 | 2.82 | 0.9055 | 160 | -- | -- |
| 32.55 | 0.267 | 10.4 | 0.368 | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
| 32.16 | 0.265 | 10.4 | -- | 0.259 | -- | -- | -- | 0.182 | 2.51 | -- | -- | -- | -- |
| 32.48 | 0.265 | 10.4 | -- | -- | 1.43 | -- | -- | 0.2 | -- | 0.8554 | 160 | -- | -- |
| 36.12 | 0.281 | 10.4 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.16 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 19 |
| 10 | 25.19 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 16 |
| 19 | 25.21 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 16 |
| 30 | 25.24 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 13 |
| 42 | 25.29 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 43 | 25.30 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 45 | 25.31 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 16 |
| 48 | 25.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 53 | 25.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 54 | 25.36 | wind | 9.0 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 56 | 25.36 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 23 |
| 58 | 25.37 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 59 | 25.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 73 | 25.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 79 | 25.42 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 81 | 25.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 89 | 25.43 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 103 | 25.44 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 22 |
| 121 | 25.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 126 | 25.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 127 | 25.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 135 | 25.48 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 22 |
| 138 | 25.48 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 23 |
| 162 | 25.50 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 169 | 25.51 | precipitation | 0.1 | 90 | > th | dose independent | no | NA | NA |
| 170 | 25.51 | precipitation | 0.1 | 90 | < th | dose independent | no | NA | NA |
| 189 | 25.51 | precipitation | 0.1 | 90 | < th | dose dependent | no | NA | NA |
| 196 | 25.52 | precipitation | 0.1 | 90 | > th | dose independent | sin | 13 | NA |
| 199 | 25.52 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 23 |
| 200 | 25.52 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 205 | 25.52 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 233 | 25.54 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 254 | 25.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 270 | 25.56 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 19 |
| 280 | 25.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 283 | 25.57 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 287 | 25.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 288 | 25.57 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 289 | 25.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 294 | 25.57 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 6 |
| 302 | 25.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 303 | 25.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 308 | 25.58 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 313 | 25.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 322 | 25.58 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 17 |
| 328 | 25.59 | precipitation | 0.1 | 270 | > th | dose independent | sin | 1 | NA |
| 330 | 25.59 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 331 | 25.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 332 | 25.59 | wind | 9.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 347 | 25.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 363 | 25.60 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 6 |
| 379 | 25.61 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 386 | 25.61 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 395 | 25.61 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 401 | 25.61 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 408 | 25.62 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 429 | 25.63 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 434 | 25.63 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 14 |
| 437 | 25.64 | precipitation | 0.1 | 90 | < th | dose independent | sin | 1 | NA |
| 443 | 25.64 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 1 | NA |
| 470 | 25.65 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 482 | 25.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 532 | 25.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 544 | 25.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 642 | 25.72 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 654 | 25.73 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 685 | 25.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 712 | 25.75 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 12 | NA |
| 718 | 25.75 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 726 | 25.75 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 728 | 25.76 | precipitation | 0.1 | 90 | < th | dose independent | sin | 12 | NA |
| 734 | 25.76 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 1 | NA |
| 735 | 25.76 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 12 | NA |
| 740 | 25.76 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 755 | 25.77 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 789 | 25.78 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 821 | 25.79 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 854 | 25.80 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 875 | 25.81 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 877 | 25.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 937 | 25.83 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 947 | 25.83 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 959 | 25.83 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 963 | 25.84 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 965 | 25.84 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 967 | 25.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 968 | 25.84 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 3 |
| 971 | 25.84 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 5 |