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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0769700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.21 (0.0202) R2 : 0.00218
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0424 (0.0425) R2dN8 : 0.00282 R2N8 : 0.00218
σ : 0.38
deviance : 66.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.98 0.367 3.23 -0.0103 0.0205 -0.702 0.109 3.26 -0.00584 9.1 0.4219 131 -- --
64.74 0.375 3.22 0.0192 0.0174 -0.412 0.139 -- -0.0265 9.31 0.6853 144 -- --
61.03 0.364 3.23 -0.00893 0.0215 -0.703 -- 3.3 4.21e-05 8.29 0.4311 130 -- --
64.25 0.373 3.21 0.0512 0.00198 -0.364 -- -- -0.00291 8.66 0.4006 370 -- --
61.05 0.364 3.23 -0.00759 -- -0.714 -- 3.26 -0.005 -- 0.4366 130 -- --
65.63 0.38 3.21 0.0853 0.0874 -- -0.186 -- -0.0357 5.24 -- -- -- --
65.7 0.38 3.21 0.0857 0.0891 -- -- -- -0.0346 6.07 -- -- -- --
64.19 0.373 3.2 0.0344 -- -0.363 -- -- -0.00177 -- 0.2 405 -- --
64.17 0.373 3.2 -- 0.00562 -0.389 -- -- -0.00374 6.41 0.2 370 -- --
66.11 0.38 3.21 0.0882 -- -- -- -- -0.0326 -- -- -- -- --
65.89 0.38 3.21 -- 0.0904 -- -- -- -0.0442 6.03 -- -- -- --
64.17 0.373 3.2 -- -- -0.388 -- -- -0.0058 -- 0.2236 370 -- --
66.31 0.38 3.21 -- -- -- -- -- -0.0424 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.89 wind 1.0 90 < th dose independent rect. 2 1
2 56.12 wind 1.0 90 < th dose dependent rect. 2 1
6 58.31 wind 7.0 1440 > th dose independent rect. 4 1
9 58.31 wind 7.0 1440 > th dose dependent rect. 4 1
24 60.27 wind 1.0 90 < th dose dependent rect. 13 15
29 60.34 wind 1.0 90 < th dose dependent rect. 15 13
38 60.45 wind 1.0 90 < th dose dependent rect. 8 20
43 60.63 wind 1.0 90 < th dose independent rect. 22 6
48 60.69 wind 1.0 90 < th dose independent rect. 13 15
52 60.74 wind 1.0 90 < th dose independent rect. 15 13
69 61.00 atmosphere 1005.0 10 > th dose independent rect. 3 1
70 61.05 atmosphere 1000.0 30 > th dose independent rect. 23 23
81 61.33 temperature 25.0 30 > th dose independent rect. 20 3
91 61.46 temperature 25.0 30 > th dose dependent rect. 22 1
96 61.48 humidity 90.0 30 < th dose dependent rect. 22 1
101 61.50 humidity 90.0 30 < th dose independent rect. 22 1
104 61.52 wind 9.0 1440 < th dose independent rect. 23 1
106 61.52 temperature 10.0 1440 > th dose independent rect. 23 1
109 61.52 temperature 30.0 1440 < th dose independent rect. 23 1
113 61.52 humidity 50.0 1440 > th dose independent rect. 23 1
123 61.52 atmosphere 995.0 1440 > th dose independent rect. 23 1
124 61.52 radiation 1.0 1440 < th dose independent rect. 23 1
145 61.52 temperature 10.0 1440 > th dose independent rect. 24 23
148 61.52 atmosphere 1005.0 30 > th dose dependent rect. 22 1
149 61.52 radiation 1.0 1440 < th dose dependent rect. 23 1
156 61.53 wind 1.0 30 > th dose independent rect. 22 1
160 61.54 temperature 20.0 30 > th dose independent rect. 22 1
162 61.54 atmosphere 1005.0 30 > th dose independent rect. 22 1
163 61.54 temperature 10.0 30 > th dose dependent rect. 22 1
167 61.55 wind 5.0 30 < th dose independent rect. 22 1
168 61.55 temperature 15.0 30 > th dose independent rect. 23 23
172 61.56 temperature 10.0 30 > th dose independent rect. 22 1
174 61.56 temperature 30.0 30 < th dose independent rect. 22 1
175 61.56 humidity 50.0 30 > th dose independent rect. 22 1
178 61.56 atmosphere 995.0 30 > th dose independent rect. 22 1
179 61.56 atmosphere 1010.0 30 < th dose independent rect. 22 1
181 61.56 radiation 1.0 30 < th dose independent rect. 22 1
186 61.56 precipitation 0.1 30 < th dose independent rect. 22 1
188 61.56 wind 1.0 30 > th dose dependent rect. 22 1
189 61.56 wind 9.0 30 < th dose dependent rect. 22 1
190 61.56 radiation 1.0 30 < th dose dependent rect. 22 1
195 61.56 precipitation 0.1 30 < th dose dependent rect. 22 1
205 61.58 humidity 50.0 30 > th dose dependent rect. 22 1
213 61.60 atmosphere 1015.0 30 < th dose dependent rect. 22 1
224 61.63 temperature 30.0 30 < th dose dependent rect. 22 1
227 61.64 wind 9.0 30 < th dose independent rect. 23 23
228 61.64 atmosphere 1000.0 10 > th dose independent rect. 4 23
277 61.78 temperature 25.0 90 > th dose dependent rect. 20 3
290 61.83 wind 7.0 4320 > th dose independent rect. 1 1
297 61.83 wind 7.0 4320 > th dose dependent rect. 1 1
303 61.85 precipitation 0.1 1440 < th dose independent rect. 23 1
305 61.85 precipitation 0.1 1440 < th dose dependent rect. 23 1
308 61.87 wind 5.0 10 < th dose dependent rect. 3 1
323 61.96 wind 1.0 90 > th dose independent rect. 23 12
328 61.98 humidity 80.0 14400 < th dose dependent rect. 3 6
342 62.03 atmosphere 1000.0 720 > th dose independent rect. 4 7
345 62.04 atmosphere 1000.0 10 > th dose dependent rect. 3 1
349 62.05 radiation 10.0 43200 < th dose dependent rect. 23 1
369 62.17 temperature 15.0 90 > th dose dependent rect. 2 2
370 62.17 atmosphere 1005.0 30 > th dose dependent rect. 20 3
414 62.33 temperature 15.0 10 > th dose dependent rect. 3 1
434 62.39 precipitation 0.1 30 < th dose independent rect. 23 23
435 62.39 precipitation 0.1 30 < th dose dependent rect. 23 23
440 62.41 temperature 30.0 720 < th dose independent rect. 16 7
448 62.43 wind 1.0 270 > th dose independent rect. 21 12
449 62.43 atmosphere 1000.0 90 > th dose independent rect. 23 12
462 62.48 wind 1.0 30 > th dose independent rect. 2 2
464 62.48 wind 1.0 90 < th dose independent rect. 2 10
475 62.51 wind 9.0 720 < th dose independent rect. 16 7
488 62.54 atmosphere 1000.0 30 > th dose independent rect. 23 21
489 62.54 wind 1.0 720 < th dose dependent rect. 18 6
497 62.56 wind 9.0 1440 < th dose independent rect. 3 2
498 62.56 temperature 10.0 1440 > th dose independent rect. 3 2
501 62.56 temperature 30.0 1440 < th dose independent rect. 3 2
505 62.56 humidity 50.0 1440 > th dose independent rect. 3 2
514 62.56 atmosphere 995.0 1440 > th dose independent rect. 3 2
515 62.56 radiation 20.0 1440 < th dose independent rect. 3 2
528 62.56 temperature 10.0 1440 > th dose independent rect. 5 22
532 62.56 radiation 1.0 4320 < th dose dependent rect. 24 3
533 62.57 precipitation 0.1 30 < th dose independent rect. 2 2
536 62.57 precipitation 0.1 30 < th dose dependent rect. 2 2
544 62.59 temperature 25.0 30 < th dose independent rect. 2 2
545 62.59 humidity 80.0 30 > th dose independent rect. 2 2
552 62.60 temperature 10.0 30 > th dose independent rect. 2 2
555 62.60 humidity 50.0 30 > th dose independent rect. 2 2
558 62.60 atmosphere 995.0 30 > th dose independent rect. 2 2
559 62.60 atmosphere 1010.0 30 < th dose independent rect. 2 2
561 62.60 radiation 1.0 30 < th dose independent rect. 2 2
566 62.60 temperature 10.0 30 > th dose independent rect. 4 22
567 62.60 precipitation 0.1 30 < th dose independent rect. 4 22
568 62.60 wind 1.0 270 < th dose dependent sin 15 NA
570 62.60 radiation 1.0 30 < th dose dependent rect. 2 2
578 62.60 precipitation 0.1 30 < th dose dependent rect. 4 22
594 62.64 atmosphere 995.0 720 > th dose independent rect. 23 17
622 62.66 wind 9.0 30 < th dose independent rect. 4 22
633 62.67 humidity 70.0 14400 > th dose independent rect. 8 1
641 62.69 temperature 25.0 10 < th dose independent rect. 4 1
654 62.71 wind 7.0 14400 < th dose independent rect. 9 1
656 62.71 wind 1.0 720 < th dose independent rect. 21 2
671 62.71 wind 1.0 720 < th dose independent rect. 19 5
672 62.71 atmosphere 1000.0 30 > th dose independent rect. 23 8
674 62.71 humidity 50.0 30 > th dose dependent rect. 2 2
698 62.75 wind 5.0 14400 < th dose independent rect. 11 1
755 62.77 wind 1.0 90 > th dose independent rect. 4 23
759 62.78 humidity 70.0 14400 > th dose independent rect. 5 4
780 62.80 humidity 70.0 14400 < th dose independent rect. 8 1
787 62.80 radiation 1.0 30 < th dose dependent rect. 2 12
805 62.83 humidity 50.0 720 > th dose independent rect. 16 7
809 62.84 humidity 50.0 720 > th dose independent rect. 4 7
810 62.84 precipitation 0.1 720 < th dose independent rect. 16 7
811 62.84 temperature 30.0 90 < th dose independent rect. 2 13
814 62.84 precipitation 0.1 720 < th dose dependent rect. 16 7
834 62.85 radiation 30.0 90 < th dose independent rect. 15 11
835 62.85 radiation 1.0 10 < th dose independent rect. 2 12
866 62.88 humidity 50.0 30 > th dose independent rect. 4 22
872 62.89 wind 7.0 14400 > th dose independent rect. 9 1
874 62.89 temperature 10.0 720 > th dose independent rect. 16 7
875 62.89 radiation 40.0 720 < th dose independent rect. 16 7
876 62.89 atmosphere 1000.0 90 > th dose independent rect. 15 11
878 62.89 temperature 10.0 720 > th dose independent rect. 23 17
879 62.89 atmosphere 995.0 720 > th dose independent rect. 11 17
885 62.90 atmosphere 1000.0 720 > th dose independent rect. 19 9
891 62.91 humidity 90.0 30 < th dose independent rect. 20 3
895 62.92 humidity 60.0 43200 < th dose independent rect. 11 1
896 62.92 temperature 10.0 720 > th dose independent rect. 4 7
898 62.92 atmosphere 1015.0 720 < th dose independent rect. 4 7
900 62.92 temperature 10.0 720 > th dose independent rect. 11 17
901 62.92 humidity 50.0 30 > th dose independent rect. 23 23
904 62.93 wind 1.0 270 < th dose independent sin 14 NA
905 62.93 atmosphere 995.0 720 > th dose independent rect. 16 7
909 62.93 wind 1.0 90 < th dose dependent rect. 2 10
910 62.93 radiation 1.0 30 < th dose dependent rect. 2 10
915 62.94 wind 1.0 90 < th dose independent rect. 2 16
920 62.94 radiation 1.0 30 < th dose dependent rect. 2 6
942 62.95 atmosphere 1015.0 1440 < th dose independent rect. 4 1
956 62.95 wind 5.0 14400 < th dose independent rect. 10 5
959 62.95 atmosphere 1000.0 90 > th dose independent rect. 2 13
961 62.95 wind 1.0 90 < th dose independent rect. 2 14
983 62.98 humidity 70.0 14400 < th dose independent rect. 6 3
998 62.98 wind 1.0 720 > th dose independent rect. 13 14
999 62.98 precipitation 0.1 720 < th dose independent rect. 11 17