Os04g0437600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0437600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.65 | 0.317 | 13.7 | 0.889 | 0.591 | -0.841 | 0.0971 | 2.12 | 0.267 | 16.7 | 24.34 | 1385 | -- | -- |
| 47.51 | 0.323 | 13.8 | 0.26 | 1.01 | -0.993 | 0.291 | -- | 0.164 | 15.8 | 22.44 | 7237 | -- | -- |
| 45.65 | 0.315 | 13.7 | 0.883 | 0.594 | -0.843 | -- | 2.09 | 0.276 | 16.7 | 24.15 | 1378 | -- | -- |
| 47.75 | 0.324 | 13.8 | 0.263 | 1.01 | -0.981 | -- | -- | 0.165 | 15.8 | 22.29 | 8584 | -- | -- |
| 62.6 | 0.368 | 13.7 | 0.923 | -- | -0.984 | -- | 2.31 | 0.288 | -- | 24.06 | 1291 | -- | -- |
| 63.17 | 0.373 | 13.8 | 0.0667 | 0.652 | -- | 0.0886 | -- | 0.0093 | 16.4 | -- | -- | -- | -- |
| 63.19 | 0.372 | 13.8 | 0.0674 | 0.652 | -- | -- | -- | 0.00978 | 16.4 | -- | -- | -- | -- |
| 68.31 | 0.385 | 13.8 | 0.39 | -- | -0.696 | -- | -- | 0.212 | -- | 20.99 | 7040 | -- | -- |
| 49.46 | 0.329 | 13.8 | -- | 0.97 | -0.9 | -- | -- | 0.125 | 15.8 | 22.29 | 8584 | -- | -- |
| 85.97 | 0.433 | 13.8 | 0.0419 | -- | -- | -- | -- | -0.00745 | -- | -- | -- | -- | -- |
| 63.31 | 0.372 | 13.8 | -- | 0.651 | -- | -- | -- | 0.00227 | 16.4 | -- | -- | -- | -- |
| 70.71 | 0.392 | 13.8 | -- | -- | -0.619 | -- | -- | 0.069 | -- | 23.4 | 2692 | -- | -- |
| 86.01 | 0.433 | 13.8 | -- | -- | -- | -- | -- | -0.0121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 17 | 43.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 74 | 44.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 112 | 45.02 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 345 | 46.02 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 399 | 46.32 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 438 | 46.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 522 | 46.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 559 | 46.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 586 | 47.06 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 694 | 47.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 750 | 47.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 767 | 47.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 785 | 47.46 | temperature | 25 | 10 | > th | dose independent | rect. | 1 | 21 |
| 956 | 47.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 981 | 47.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 994 | 47.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |