Os07g0119000 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0119000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MAP3K gamma protein kinase (Fragment).

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	5.75	(0.0284)	R²	:	0.772
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	2.82	(0.0719)	R²_dC	:	0.777	R²_C	:	0.771
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.0505	(0.0596)	R²_dN8	:	0.000465	R²_N8	:	-0.00525
σ	:	0.534
deviance	:	130.48
__

_____

C
peak time of C	:	8.27
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
106.7	0.485	5.79	-0.615	2.42	-0.904	-0.296	-0.014	-0.135	7	18.39	10	--	--
106.7	0.481	5.79	-0.615	2.42	-0.904	-0.29	--	-0.135	7	18.32	10	--	--
106.79	0.481	5.79	-0.613	2.42	-0.899	--	0.0647	-0.129	7.01	18.23	8	--	--
106.8	0.481	5.79	-0.617	2.41	-0.91	--	--	-0.128	6.99	18.2	8	--	--
373.26	0.9	5.84	-0.504	--	-1.38	--	0.606	-0.0666	--	8.362	7	--	--
121	0.516	5.77	-0.587	2.82	--	-0.236	--	-0.117	8.25	--	--	--	--
121.17	0.515	5.77	-0.594	2.82	--	--	--	-0.117	8.25	--	--	--	--
372.03	0.898	5.85	-0.527	--	-1.39	--	--	-0.116	--	8.33	6	--	--
116.81	0.503	5.77	--	2.41	-0.893	--	--	-0.0602	7.03	17.42	8	--	--
562.28	1.11	5.84	-0.574	--	--	--	--	-0.0851	--	--	--	--	--
130.48	0.534	5.75	--	2.82	--	--	--	-0.0505	8.27	--	--	--	--
377.31	0.905	5.83	--	--	-1.41	--	--	-0.049	--	8.53	4	--	--
570.98	1.12	5.82	--	--	--	--	--	-0.0214	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	93.45	temperature	15.0	270	> th	dose independent	rect.	3	10
3	96.82	precipitation	0.1	90	< th	dose independent	rect.	1	18
4	96.82	precipitation	0.1	90	< th	dose dependent	rect.	1	18
5	97.00	temperature	15.0	90	> th	dose independent	rect.	19	6
6	97.05	wind	9.0	270	< th	dose independent	rect.	3	10
8	97.32	radiation	1.0	270	< th	dose dependent	rect.	15	8
10	97.41	humidity	70.0	90	> th	dose independent	rect.	19	6
12	97.49	atmosphere	1015.0	270	< th	dose independent	rect.	22	21
15	97.64	temperature	30.0	90	< th	dose independent	rect.	19	6
16	97.64	humidity	50.0	90	> th	dose independent	rect.	19	6
18	97.64	atmosphere	995.0	90	> th	dose independent	rect.	19	6
19	97.64	radiation	1.0	90	< th	dose independent	rect.	19	6
25	97.64	temperature	10.0	90	> th	dose independent	rect.	1	18
26	97.64	atmosphere	1015.0	90	< th	dose independent	rect.	1	18
27	97.64	radiation	1.0	90	< th	dose dependent	rect.	19	6
32	97.67	wind	9.0	90	< th	dose independent	rect.	19	6
35	97.72	atmosphere	995.0	270	> th	dose independent	rect.	3	10
36	97.72	atmosphere	1015.0	270	< th	dose independent	rect.	3	10
37	97.72	temperature	10.0	270	> th	dose independent	rect.	13	14
38	97.73	precipitation	0.1	270	< th	dose independent	rect.	3	10
40	97.73	precipitation	0.1	270	< th	dose dependent	rect.	3	10
46	97.83	radiation	20.0	10	< th	dose dependent	rect.	1	18
49	98.00	temperature	15.0	270	> th	dose independent	rect.	19	3
50	98.00	radiation	20.0	10	< th	dose dependent	rect.	24	20
52	98.06	radiation	1.0	270	< th	dose independent	rect.	17	6
58	98.18	precipitation	0.1	90	< th	dose independent	rect.	19	6
59	98.18	precipitation	0.1	90	< th	dose dependent	rect.	19	6
68	98.43	temperature	30.0	270	< th	dose independent	rect.	18	4
69	98.43	precipitation	0.1	270	< th	dose independent	rect.	13	14
70	98.43	precipitation	0.1	270	< th	dose dependent	rect.	13	14
71	98.45	wind	9.0	90	< th	dose independent	rect.	1	18
79	98.53	atmosphere	1015.0	270	< th	dose independent	rect.	13	14
80	98.53	precipitation	0.1	270	< th	dose independent	rect.	22	21
81	98.53	precipitation	0.1	270	< th	dose dependent	rect.	22	21
83	98.58	wind	9.0	270	< th	dose independent	rect.	13	14
85	98.61	humidity	70.0	270	> th	dose independent	rect.	18	4
87	98.62	wind	1.0	270	> th	dose independent	rect.	19	3
92	98.68	humidity	50.0	270	> th	dose independent	rect.	19	3
94	98.68	atmosphere	995.0	270	> th	dose independent	rect.	19	3
95	98.68	radiation	1.0	270	< th	dose independent	rect.	19	3
100	98.68	temperature	10.0	270	> th	dose independent	rect.	22	21
107	98.70	atmosphere	995.0	90	> th	dose independent	rect.	1	18
108	98.71	wind	9.0	270	< th	dose independent	rect.	19	3
110	98.71	temperature	10.0	90	> th	dose dependent	rect.	5	10
117	98.78	radiation	10.0	30	< th	dose independent	rect.	1	18
121	98.88	precipitation	0.1	270	< th	dose independent	rect.	19	3
123	98.88	precipitation	0.1	270	< th	dose dependent	rect.	19	3
129	98.97	wind	1.0	270	> th	dose independent	rect.	18	5
130	98.97	precipitation	0.1	270	< th	dose independent	rect.	23	19
131	98.97	precipitation	0.1	270	< th	dose dependent	rect.	23	19
153	99.20	temperature	10.0	270	> th	dose independent	rect.	23	19
160	99.30	radiation	1.0	270	< th	dose dependent	rect.	6	17
219	99.62	wind	9.0	270	< th	dose independent	rect.	22	21
224	99.70	humidity	70.0	10	> th	dose independent	rect.	19	7
235	99.78	temperature	10.0	270	> th	dose dependent	rect.	3	10
245	99.89	radiation	1.0	1440	< th	dose dependent	rect.	20	6
246	99.90	wind	9.0	270	< th	dose independent	rect.	23	19
247	99.94	humidity	50.0	90	> th	dose dependent	rect.	19	6
270	100.04	radiation	1.0	270	< th	dose dependent	rect.	3	21
275	100.06	temperature	15.0	90	> th	dose independent	rect.	19	20
278	100.08	atmosphere	995.0	270	> th	dose independent	rect.	23	19
298	100.26	radiation	1.0	270	< th	dose independent	rect.	6	17
313	100.46	radiation	40.0	270	< th	dose independent	rect.	13	14
318	100.51	radiation	40.0	90	< th	dose independent	rect.	1	18
325	100.58	temperature	10.0	1440	> th	dose independent	rect.	20	6
328	100.58	temperature	30.0	1440	< th	dose independent	rect.	20	6
332	100.58	humidity	50.0	1440	> th	dose independent	rect.	20	6
338	100.58	atmosphere	995.0	1440	> th	dose independent	rect.	20	6
339	100.58	radiation	1.0	1440	< th	dose independent	rect.	20	6
359	100.58	temperature	10.0	1440	> th	dose independent	rect.	2	18
375	100.77	radiation	1.0	270	< th	dose dependent	sin	20	NA
376	100.78	temperature	15.0	270	> th	dose independent	rect.	17	21
377	100.78	humidity	50.0	270	> th	dose dependent	rect.	18	4
380	100.79	humidity	50.0	270	> th	dose independent	rect.	3	10
431	100.88	atmosphere	995.0	270	> th	dose independent	rect.	22	21
450	101.13	atmosphere	995.0	270	> th	dose dependent	rect.	18	4
510	101.63	temperature	15.0	270	> th	dose independent	rect.	9	14
512	101.63	atmosphere	995.0	90	> th	dose dependent	rect.	19	6
513	101.64	radiation	30.0	90	< th	dose independent	rect.	13	6
515	101.65	precipitation	0.1	90	< th	dose independent	rect.	15	4
516	101.65	radiation	1.0	270	< th	dose independent	rect.	3	21
517	101.65	precipitation	0.1	90	< th	dose dependent	rect.	15	4
524	101.69	temperature	15.0	10	> th	dose independent	rect.	20	5
596	101.87	wind	7.0	90	< th	dose independent	rect.	19	20
629	101.95	atmosphere	1015.0	270	< th	dose independent	rect.	19	2
652	102.10	wind	1.0	10	> th	dose independent	rect.	20	6
663	102.16	atmosphere	995.0	270	> th	dose independent	rect.	13	14
666	102.17	precipitation	0.1	10	< th	dose independent	rect.	20	5
667	102.17	precipitation	0.1	10	< th	dose dependent	rect.	20	5
669	102.17	temperature	10.0	90	> th	dose dependent	rect.	15	14
703	102.33	radiation	30.0	90	< th	dose independent	rect.	15	4
714	102.38	wind	1.0	90	> th	dose independent	rect.	15	4
716	102.38	temperature	30.0	10	< th	dose independent	rect.	20	5
717	102.38	humidity	50.0	10	> th	dose independent	rect.	20	5
720	102.38	atmosphere	995.0	10	> th	dose independent	rect.	20	5
721	102.38	radiation	1.0	10	< th	dose independent	rect.	20	5
726	102.38	temperature	10.0	10	> th	dose independent	rect.	1	19
728	102.38	atmosphere	1015.0	10	< th	dose independent	rect.	1	19
729	102.38	radiation	1.0	10	< th	dose dependent	rect.	20	5
734	102.40	radiation	1.0	270	< th	dose independent	sin	19	NA
737	102.41	temperature	20.0	90	> th	dose independent	rect.	15	4
738	102.41	wind	9.0	10	< th	dose independent	rect.	20	5
742	102.42	radiation	40.0	90	< th	dose dependent	rect.	13	6
757	102.43	wind	9.0	90	< th	dose dependent	rect.	19	6
764	102.43	temperature	10.0	270	> th	dose dependent	rect.	13	14
770	102.46	temperature	10.0	270	> th	dose dependent	rect.	19	3
801	102.57	temperature	10.0	90	> th	dose independent	rect.	15	4
803	102.57	atmosphere	1010.0	90	< th	dose independent	rect.	15	4
814	102.62	radiation	1.0	270	> th	dose independent	sin	18	NA
891	102.76	radiation	10.0	10	< th	dose independent	rect.	9	11
895	102.77	temperature	10.0	90	> th	dose dependent	rect.	19	6
903	102.79	atmosphere	995.0	90	> th	dose independent	rect.	19	20
915	102.82	wind	9.0	90	< th	dose independent	rect.	15	4
973	102.92	temperature	15.0	270	> th	dose independent	rect.	3	21
981	102.94	temperature	20.0	270	> th	dose dependent	rect.	24	3
997	102.95	wind	9.0	270	< th	dose independent	rect.	17	21