Os03g0703400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MAP3K beta 3 protein kinase (EC 2.7.1.37) (Fragment).
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Os03g0703400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MAP3K beta 3 protein kinase (EC 2.7.1.37) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.97 | 0.244 | 10.9 | 0.185 | 0.789 | -0.589 | -0.321 | -0.262 | 0.0139 | 5.35 | 23.8 | 834 | -- | -- |
| 27.06 | 0.242 | 10.9 | 0.147 | 0.783 | -0.553 | -0.296 | -- | 0.00881 | 5.33 | 23.97 | 892 | -- | -- |
| 27.21 | 0.243 | 10.9 | 0.193 | 0.78 | -0.61 | -- | -0.315 | 0.0181 | 5.35 | 23.58 | 914 | -- | -- |
| 27.31 | 0.243 | 10.9 | 0.141 | 0.779 | -0.558 | -- | -- | 0.00588 | 5.35 | 23.9 | 905 | -- | -- |
| 57.12 | 0.352 | 10.9 | 0.207 | -- | -0.71 | -- | -0.345 | 0.00599 | -- | 25.6 | 1222 | -- | -- |
| 31.27 | 0.262 | 10.9 | 0.298 | 0.785 | -- | -0.348 | -- | 0.109 | 5.03 | -- | -- | -- | -- |
| 31.58 | 0.263 | 10.9 | 0.298 | 0.783 | -- | -- | -- | 0.111 | 5.03 | -- | -- | -- | -- |
| 57.17 | 0.352 | 10.9 | 0.122 | -- | -0.68 | -- | -- | -0.0178 | -- | 25.7 | 1213 | -- | -- |
| 27.77 | 0.245 | 10.9 | -- | 0.761 | -0.61 | -- | -- | -0.015 | 5.37 | 23.99 | 1005 | -- | -- |
| 63.78 | 0.373 | 10.9 | 0.327 | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
| 33.92 | 0.272 | 10.9 | -- | 0.788 | -- | -- | -- | 0.0773 | 5.02 | -- | -- | -- | -- |
| 57.52 | 0.353 | 10.9 | -- | -- | -0.733 | -- | -- | -0.0432 | -- | 25.7 | 1215 | -- | -- |
| 66.59 | 0.381 | 10.9 | -- | -- | -- | -- | -- | 0.0943 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 4 | 24.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 8 | 25.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 26 | 25.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 42 | 25.40 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 63 | 25.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 158 | 25.78 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 306 | 26.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 560 | 26.55 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 15 |
| 595 | 26.62 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 8 |
| 624 | 26.67 | temperature | 30 | 10 | < th | dose independent | rect. | 9 | 8 |
| 700 | 26.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 707 | 26.78 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 17 |
| 708 | 26.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 791 | 26.86 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 6 |
| 869 | 26.92 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 20 |
| 870 | 26.92 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 22 |
| 976 | 26.99 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 9 |
| 993 | 27.00 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 17 |