BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0752000 Os02g0752000|AK066184
(378 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0752000 Cellular retinaldehyde-binding/triple function... 701 0.0
Os01g0264700 Cellular retinaldehyde binding/alpha-tocophero... 284 6e-77
Os03g0724100 Cellular retinaldehyde binding/alpha-tocophero... 263 2e-70
Os05g0267800 Cellular retinaldehyde-binding/triple function... 202 3e-52
Os05g0267100 Cellular retinaldehyde-binding/triple function... 121 7e-28
AK107322 96 3e-20
Os01g0926800 Phosphatidylinositol transfer protein-like, N-... 83 3e-16
Os03g0219100 Phosphatidylinositol transfer protein-like, N-... 81 1e-15
Os02g0321500 Phosphatidylinositol transfer protein-like, N-... 74 1e-13
Os03g0850700 Similar to Phosphatidylinositol phosphatidylch... 71 1e-12
>Os02g0752000 Cellular retinaldehyde-binding/triple function, N-terminal domain
containing protein
Length = 378
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/378 (91%), Positives = 344/378 (91%)
Query: 1 MSSASGVNNGDGKEAALFEQRLSKIGEVRAALGQLSGKAALYCSDASIARYLVARNWEVX 60
MSSASGVNNGDGKEAALFEQRLSKIGEVRAALGQLSGKAALYCSDASIARYLVARNWEV
Sbjct: 1 MSSASGVNNGDGKEAALFEQRLSKIGEVRAALGQLSGKAALYCSDASIARYLVARNWEVK 60
Query: 61 XXXXXXXXXXXWRSEYKPDEIRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNTKK 120
WRSEYKPDEIRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNTKK
Sbjct: 61 KATKMLKKTLKWRSEYKPDEIRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNTKK 120
Query: 121 AKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPERL 180
AKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPERL
Sbjct: 121 AKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPERL 180
Query: 181 GVAILYNAPKFFESFWKIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGG 240
GVAILYNAPKFFESFWKIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGG
Sbjct: 181 GVAILYNAPKFFESFWKIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGG 240
Query: 241 KNQATFNINDYAARMREDDIKMPLFWSPENSALASEPYVMVNKDMAQEGSSGLKSEETAS 300
KNQATFNINDYAARMREDDIKMPLFWSPENSALASEPYVMVNKDMAQEGSSGLKSEETAS
Sbjct: 241 KNQATFNINDYAARMREDDIKMPLFWSPENSALASEPYVMVNKDMAQEGSSGLKSEETAS 300
Query: 301 EKXXXXXXXXXXXXXXXXXXXXXXIDSVSGKREETVAVSDKREEKETESENGKAAVTSSN 360
EK IDSVSGKREETVAVSDKREEKETESENGKAAVTSSN
Sbjct: 301 EKREETDTESENREETESESERAEIDSVSGKREETVAVSDKREEKETESENGKAAVTSSN 360
Query: 361 GVELTSLPGEGKGITPAD 378
GVELTSLPGEGKGITPAD
Sbjct: 361 GVELTSLPGEGKGITPAD 378
>Os01g0264700 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 311
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 178/264 (67%), Gaps = 2/264 (0%)
Query: 1 MSSASGVNNGDGKEAAL-FEQRLSKIGEVRAALGQLSGKAAL-YCSDASIARYLVARNWE 58
MS +NG E L E++ KI ++R LG+ S + + SDAS R+L ARNW
Sbjct: 1 MSFLFKSSNGATTEKNLTLEEQQEKINDLRKELGEHSSEEIQDFLSDASCLRFLRARNWN 60
Query: 59 VXXXXXXXXXXXXWRSEYKPDEIRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNT 118
V WR Y P +I WD++A+EA TGKIYR DY DK GR++LV+RPG++NT
Sbjct: 61 VQKASKMMKSAVKWRVSYMPQKINWDDVAHEAETGKIYRADYKDKHGRTVLVLRPGLENT 120
Query: 119 KKAKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPE 178
KGQI+YLVYC+E AI++L DQ +MVWL DF ++L + L VT+ T +VLQ YPE
Sbjct: 121 TSGKGQIKYLVYCLEKAIMSLTEDQEKMVWLTDFQSWTLGSTPLKVTRETVNVLQDCYPE 180
Query: 179 RLGVAILYNAPKFFESFWKIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAF 238
RLG+AILYN P+ FESFWKI P L+ +T+ KVKFVY E+ KIM D+F++++L+SAF
Sbjct: 181 RLGLAILYNPPRIFESFWKIVKPFLDHETYKKVKFVYSSDKESQKIMADVFDLDKLDSAF 240
Query: 239 GGKNQATFNINDYAARMREDDIKM 262
GG+N ATF N YA RMR DDIKM
Sbjct: 241 GGRNPATFEYNSYAERMRADDIKM 264
>Os03g0724100 Cellular retinaldehyde binding/alpha-tocopherol transport family
protein
Length = 299
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 118/251 (47%), Positives = 166/251 (66%), Gaps = 1/251 (0%)
Query: 18 FEQRLSKIGEVRAALGQLSGKAALYCSDASIARYLVARNWEVXXXXXXXXXXXXWRSEYK 77
EQ+ +KI E+RAALG LS YC++A + RYL ARNW V WR+ Y+
Sbjct: 17 IEQQEAKIQELRAALGPLSSSGKKYCTEACLRRYLEARNWNVDKSRKMLEESLKWRTAYR 76
Query: 78 PDEIRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNTKKAKGQIRYLVYCMENAIL 137
P++IRW EI+ E+ TGK+YR + D+ GR++++MRP QNT +GQ+R+LVY +ENAIL
Sbjct: 77 PEDIRWPEISVESETGKMYRASFVDREGRTVVIMRPAKQNTSSHEGQVRFLVYTLENAIL 136
Query: 138 NLPHDQSQMVWLIDFAGFSLSNIS-LHVTKLTADVLQGHYPERLGVAILYNAPKFFESFW 196
+LP DQ +MVWLIDF G++L+N + + + A++LQ HYPERL + IL+N PK FE+FW
Sbjct: 137 SLPEDQEKMVWLIDFTGWTLANATPIKTARECANILQNHYPERLAIGILFNPPKVFEAFW 196
Query: 197 KIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGGKNQATFNINDYAARMR 256
K+ L+PK+ KV FVY E+ KI+ + E L FGGKN ++ +Y+ M
Sbjct: 197 KVVKHFLDPKSIQKVNFVYLKNEESMKILHKYIDPEVLPVEFGGKNNVVYSHEEYSKLMV 256
Query: 257 EDDIKMPLFWS 267
+DDIKM FW+
Sbjct: 257 KDDIKMASFWA 267
>Os05g0267800 Cellular retinaldehyde-binding/triple function, N-terminal domain
containing protein
Length = 283
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 146/239 (61%), Gaps = 3/239 (1%)
Query: 24 KIGEVRAALG-QLSGKAALYCSDASIARYLVARNWEVXXXXXXXXXXXXWRSEYKPDEIR 82
KI +VR LG Q++ + + SDA+I R+L ARNW WR +Y+PD IR
Sbjct: 27 KIKKVRELLGSQMTAEMPSFLSDATIRRFLRARNWSTEQATKALKETVKWRRQYRPDTIR 86
Query: 83 WDEI-ANEAATGKIYRTDYFDKSGRSILVMRPGVQNTKKAKGQIRYLVYCMENAILNLPH 141
W++I E + Y DYFDK+GR + + P +++ K QI+ LVY +E ++ +
Sbjct: 87 WEDIPGREHEARRTYIADYFDKNGRIVFISNPTIKSKSSTKDQIKQLVYNLEIFAMHSEN 146
Query: 142 DQSQM-VWLIDFAGFSLSNISLHVTKLTADVLQGHYPERLGVAILYNAPKFFESFWKIAS 200
+ + VWL DF G+ L+N L + + ++Q HYP + VAIL N P+ FESFWKI
Sbjct: 147 MEDECTVWLTDFQGWVLTNTPLPLLRECTHIIQNHYPGLISVAILSNPPRIFESFWKIVC 206
Query: 201 PILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGGKNQATFNINDYAARMREDD 259
+EPK KVKFVY + PE++KI+ D+F++++LESAFGG+N F+++ YA RM+ D
Sbjct: 207 YFIEPKLKEKVKFVYTNNPESHKIVADMFDLDKLESAFGGRNTLPFDMDKYAERMKRSD 265
>Os05g0267100 Cellular retinaldehyde-binding/triple function, C-terminal domain
containing protein
Length = 143
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 81/118 (68%)
Query: 143 QSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPERLGVAILYNAPKFFESFWKIASPI 202
+ + WLID G+S+S+ L ++ + ++Q +YP + VAIL N P+ FESFWKI
Sbjct: 8 EEHVTWLIDLRGWSISSTPLSTSRESMHIVQNYYPGIIAVAILSNTPRIFESFWKIIKHF 67
Query: 203 LEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGGKNQATFNINDYAARMREDDI 260
LE K KVKF+Y + PE++KI+ ++F+M+ LE+AFGG+N T +I++YA RMR D+
Sbjct: 68 LEAKMSEKVKFLYTNNPESHKIVSEMFDMDLLETAFGGRNSITIDIDNYAERMRRSDL 125
>AK107322
Length = 405
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 41 LYCSDASIARYLVARNWEVXXXXXXXXXXXXWRSEYKPDEIRWDEIANEAATGKIYRTDY 100
++ + + RYL A W WR EY D +D I+ E +GK Y
Sbjct: 130 MWLTRECLLRYLRATKWVTANALRRLQSTLSWRREYGADTFTYDYISPENESGKQVILGY 189
Query: 101 FDKSGRSILVMRPGVQNTKKAKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNI 160
D R L + PG QNTK + QI +L + ++ I P Q LIDF G + +
Sbjct: 190 -DNEARPCLFLSPGKQNTKMSDRQIHHLCFMLDRVIDMTPPGQETTALLIDFKGAAKGAV 248
Query: 161 -SLHVTKLTADVLQGHYPERLGVAILYNAPKFFESFWKIASPILEPKTFNKVKF 213
S+ + ++LQ H PERLG A++ P + F+K+ S ++P T +K+KF
Sbjct: 249 PSVEQARAVLNILQNHNPERLGRALITQMPWYVSIFFKLISSFIDPVTKDKMKF 302
>Os01g0926800 Phosphatidylinositol transfer protein-like, N-terminal domain
containing protein
Length = 247
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 14/236 (5%)
Query: 24 KIGEVRAALGQLSGKAALYCSDASIARYLVARNWEVXXXXXXXXXXXXWRSEYKPD-EIR 82
K+ E+RA + + A + ++ R+L AR+ V WR E P +
Sbjct: 16 KVAELRATV-EAQDPHAKEVDNLTLRRFLRARDHNVEKASAMLLKALRWRREAVPGGSVP 74
Query: 83 WDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQ-NTKKAKGQIR-YLVYCMENAILNLP 140
+++ ++ K+Y D++GR IL+ P + K+ + + Y VY +++ +P
Sbjct: 75 EEKVQSDLDDDKVYMGGA-DRTGRPILLAFPAKHFSAKRDMPKFKSYCVYLLDSICARIP 133
Query: 141 HDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPERLGVAILYNAPKFFESFWKIAS 200
Q + V ++D G+ SN + +++Q +YPERLG A++ + P F WK+
Sbjct: 134 RGQEKFVCIVDLKGWGYSNCDIRAYIAAIEIMQNYYPERLGKALMIHVPYMFMKAWKMIY 193
Query: 201 PILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGG-------KNQATFNIN 249
P ++ T + KFV+ D +++ + ++ GG KN A N++
Sbjct: 194 PFIDNVTRD--KFVFVDDKSLQEVLHQEIDDSQIPDTLGGKLAPVSLKNNARINLD 247
>Os03g0219100 Phosphatidylinositol transfer protein-like, N-terminal domain
containing protein
Length = 438
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 24 KIGEVRAAL---GQLSGKAALYCSDASIARYLVARNWEVXXXXXXXXXXXXWRSEYKPDE 80
KI VR L L+ K A+YC+DA + R+L AR V WR D
Sbjct: 13 KIEAVRKTLRKQAPLTAKQAMYCNDACVERFLRARGESVKKAAKHLRTVLSWRDTIGADH 72
Query: 81 IRWDEIANEAATGKIYRTDYFDKSGRSILVMRPGVQNTKKAKGQ---IRYLVYCMENAIL 137
I DE + E A G Y + D R ++V R Q+ K Q +R LV+ +E A+
Sbjct: 73 IIADEFSAELADGVAYVAGH-DDEARPVVVFRIK-QDYPKFHSQKSFVRLLVFTLEVAVS 130
Query: 138 NLPHDQSQMVWLIDFAGFSLSNISLHVTKLTADVLQGHYPERLGVAILYNAPKFFESFWK 197
+ Q V L D + F ++ L++ T ++ +YP RL A + + P F WK
Sbjct: 131 CMSRFVDQFVLLFDASFFRSASAFLNLLMGTLKIVADYYPGRLHRAFVIDPPSLFSVLWK 190
Query: 198 IASPILE 204
P +E
Sbjct: 191 GVRPFVE 197
>Os02g0321500 Phosphatidylinositol transfer protein-like, N-terminal domain
containing protein
Length = 261
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 48 IARYLVARNWEVXXXXXXXXXXXXWRSEYKPDEIRWDEIANEAATGKIYRTDYFDKSGRS 107
I +L R V WR +++ E+ + + TGK Y D FD GR
Sbjct: 73 ILWFLKDRKLSVDETVSKLTKAIKWRQDFQVSELSEESVKGLYQTGKAYVHDSFDIYGRP 132
Query: 108 ILVMR-----PGVQNTKKAKGQIRYLVYCMENAILNLPHDQSQMVWLIDFAGFSLSNISL 162
+LV+ P Q+ + + +LV E A+ LP ++ + D GF + N L
Sbjct: 133 VLVVVASKHFPSKQDPVENEKLCAFLV---EKALSRLPLGTENILGIFDLRGFQVENGDL 189
Query: 163 HVTKLTADVLQGHYPERLGVAILYNAPKFFESFWKIASPILE 204
K DV +YP+RLG + +AP F+ W++ P+L+
Sbjct: 190 QFLKFLIDVFYYYYPKRLGQVLFVDAPFVFQPMWQLVKPLLK 231
>Os03g0850700 Similar to Phosphatidylinositol phosphatidylcholine transfer
protein sec14 cytosolic-like protein
Length = 261
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 17/228 (7%)
Query: 24 KIGEVRAALGQLSGKAALYCSDASIARYLVARNWEVXXXXXXXXXXXXWRSEYKPD--EI 81
K+ E+RA + + A D + R+L AR+ + W+ E KP I
Sbjct: 23 KVAELRAVV-EAQDPACKEEDDYQLRRFLRARDHNIGKASAMLVKYLQWKREVKPGGRAI 81
Query: 82 RWDEIANEAATGKIYRTDYFDKSGRSILV-----MRPGVQNTKKAKGQIRYLVYCMENAI 136
+E+ E A K+Y Y D+ GR ++ P ++ + K RY+VY ++
Sbjct: 82 ADEEVRGELAQEKLYMQGY-DRQGRPLVYGFGARHFPARRDLDEFK---RYVVYVLDRTC 137
Query: 137 LNLPHD--QSQMVWLIDFAGFSL-SNISLHVTKLTADVLQGHYPERLGVAILYNAPKFFE 193
L + Q + + D G+ N + +++Q +YPERLG L + P F
Sbjct: 138 ARLGGNGGQEKFAAVADLQGWGYYGNCDIRAYVAALEIMQNYYPERLGRVFLIHVPYVFM 197
Query: 194 SFWKIASPILEPKTFNKVKFVYPDRPETNKIMEDLFNMEELESAFGGK 241
+ WKI P ++ T K KFV+ + + + D + L +GGK
Sbjct: 198 AAWKIIYPFIDDNT--KKKFVFVADKDLHATLRDAIDDSNLAEDYGGK 243
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,191,848
Number of extensions: 418897
Number of successful extensions: 878
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 868
Number of HSP's successfully gapped: 10
Length of query: 378
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 275
Effective length of database: 11,657,759
Effective search space: 3205883725
Effective search space used: 3205883725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 157 (65.1 bits)