Os03g0219100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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Os03g0219100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.63 | 0.797 | 6.23 | 1.13 | 2.57 | -1.84 | 2.32 | 6.02 | -0.985 | 4.52 | 15.18 | 245 | -- | -- |
| 305.77 | 0.814 | 6.34 | 0.241 | 2.65 | -1.89 | 0.751 | -- | -1.23 | 4.9 | 9.454 | 35 | -- | -- |
| 300.28 | 0.807 | 6.23 | 0.935 | 2.64 | -1.7 | -- | 4.97 | -1.02 | 4.67 | 14.81 | 226 | -- | -- |
| 305.82 | 0.814 | 6.34 | 0.216 | 2.54 | -2.03 | -- | -- | -1.22 | 4.85 | 9.828 | 92 | -- | -- |
| 502.53 | 1.04 | 6.24 | 1.24 | -- | -3.94 | -- | 5.78 | -0.795 | -- | 24.16 | 190 | -- | -- |
| 342.88 | 0.868 | 6.4 | -0.194 | 3.06 | -- | 1.15 | -- | -1.5 | 4.53 | -- | -- | -- | -- |
| 346.44 | 0.872 | 6.4 | -0.202 | 3.07 | -- | -- | -- | -1.5 | 4.54 | -- | -- | -- | -- |
| 515.01 | 1.06 | 6.35 | 0.447 | -- | -3.51 | -- | -- | -1.09 | -- | 24.2 | 159 | -- | -- |
| 306.9 | 0.816 | 6.34 | -- | 2.58 | -1.93 | -- | -- | -1.25 | 4.86 | 10.98 | 78 | -- | -- |
| 848.76 | 1.36 | 6.42 | -0.083 | -- | -- | -- | -- | -1.42 | -- | -- | -- | -- | -- |
| 347.51 | 0.872 | 6.39 | -- | 3.06 | -- | -- | -- | -1.48 | 4.54 | -- | -- | -- | -- |
| 520.75 | 1.06 | 6.36 | -- | -- | -3.45 | -- | -- | -1.14 | -- | 24.2 | 160 | -- | -- |
| 848.94 | 1.36 | 6.42 | -- | -- | -- | -- | -- | -1.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 277.75 | temperature | 10 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 4 | 282.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 6 | 282.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 11 | 283.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 12 | 284.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 17 | 284.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 27 | 285.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 39 | 286.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 60 | 287.99 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 73 | 288.82 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 81 | 289.12 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 87 | 289.38 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 111 | 290.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 20 |
| 151 | 291.46 | temperature | 15 | 90 | > th | dose dependent | sin | 2 | NA |
| 158 | 291.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 236 | 293.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 241 | 293.37 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 258 | 293.57 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 18 |
| 265 | 293.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 272 | 293.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 274 | 293.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 279 | 293.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 10 |
| 289 | 294.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 314 | 294.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 316 | 294.29 | humidity | 90 | 14400 | > th | dose dependent | sin | 8 | NA |
| 349 | 294.57 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 377 | 294.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 13 |
| 401 | 294.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 459 | 295.34 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 490 | 295.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 526 | 295.80 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 533 | 295.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 534 | 295.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 553 | 295.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 599 | 296.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 605 | 296.26 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 613 | 296.29 | wind | 5 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 649 | 296.49 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 662 | 296.57 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 675 | 296.65 | wind | 5 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 676 | 296.65 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 724 | 296.97 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 726 | 296.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 730 | 297.00 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 735 | 297.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 751 | 297.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 771 | 297.20 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 782 | 297.25 | wind | 3 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 784 | 297.26 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 787 | 297.27 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 792 | 297.29 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 806 | 297.33 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 809 | 297.34 | humidity | 80 | 43200 | < th | dose dependent | sin | 7 | NA |
| 815 | 297.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 819 | 297.40 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 871 | 297.62 | wind | 7 | 43200 | > th | dose dependent | rect. | 21 | 8 |
| 876 | 297.63 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 896 | 297.72 | wind | 7 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 925 | 297.85 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 926 | 297.85 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 935 | 297.88 | wind | 9 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 948 | 297.94 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 957 | 297.98 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 959 | 297.99 | temperature | 30 | 270 | < th | dose dependent | sin | 4 | NA |
| 975 | 298.04 | wind | 9 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 979 | 298.05 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 982 | 298.06 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |