Os01g0926800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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Os01g0926800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.22 | 0.326 | 13.1 | 1.02 | 1.41 | -0.54 | 0.331 | 0.47 | 0.176 | 6.92 | 20.4 | 339 | -- | -- |
| 48.92 | 0.326 | 13.1 | 0.949 | 1.39 | -0.579 | 0.165 | -- | 0.161 | 6.9 | 20.4 | 340 | -- | -- |
| 48.48 | 0.324 | 13.1 | 1.01 | 1.41 | -0.544 | -- | 0.412 | 0.174 | 6.92 | 20.5 | 337 | -- | -- |
| 48.98 | 0.326 | 13.1 | 0.941 | 1.4 | -0.589 | -- | -- | 0.158 | 6.92 | 20.5 | 339 | -- | -- |
| 116.41 | 0.503 | 13 | 1.32 | -- | -0.869 | -- | 0.674 | 0.523 | -- | 26.1 | 368 | -- | -- |
| 60.03 | 0.363 | 13.1 | 0.748 | 1.47 | -- | 0.252 | -- | 0.0387 | 6.81 | -- | -- | -- | -- |
| 60.19 | 0.363 | 13.1 | 0.753 | 1.47 | -- | -- | -- | 0.038 | 6.81 | -- | -- | -- | -- |
| 113.16 | 0.495 | 13.1 | 1.03 | -- | -0.958 | -- | -- | 0.374 | -- | 25.72 | 375 | -- | -- |
| 70.14 | 0.39 | 13.1 | -- | 1.45 | -0.356 | -- | -- | 0.0169 | 6.9 | 20.51 | 234 | -- | -- |
| 173.48 | 0.615 | 13.2 | 0.785 | -- | -- | -- | -- | 0.0665 | -- | -- | -- | -- | -- |
| 75.12 | 0.405 | 13.1 | -- | 1.48 | -- | -- | -- | -0.0458 | 6.78 | -- | -- | -- | -- |
| 140.59 | 0.552 | 13.1 | -- | -- | -0.855 | -- | -- | 0.244 | -- | 25.71 | 374 | -- | -- |
| 189.75 | 0.643 | 13.2 | -- | -- | -- | -- | -- | -0.0206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.23 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 21 |
| 5 | 44.83 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 14 |
| 32 | 47.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 36 | 47.25 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 20 |
| 46 | 47.36 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 20 |
| 64 | 47.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 78 | 48.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 82 | 48.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 88 | 48.17 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 123 | 48.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 124 | 48.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 14 |
| 126 | 48.46 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 19 |
| 150 | 48.51 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 168 | 48.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 174 | 48.56 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 194 | 48.60 | temperature | 20 | 270 | > th | dose independent | sin | 8 | NA |
| 202 | 48.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 224 | 48.65 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 235 | 48.66 | temperature | 20 | 270 | < th | dose independent | sin | 8 | NA |
| 248 | 48.68 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 23 |
| 260 | 48.71 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 14 |
| 268 | 48.72 | temperature | 15 | 90 | > th | dose dependent | sin | 6 | NA |
| 276 | 48.74 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 281 | 48.75 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 321 | 48.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 342 | 48.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 427 | 48.98 | temperature | 20 | 270 | < th | dose independent | rect. | 7 | 23 |
| 442 | 49.01 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 23 |
| 443 | 49.01 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 621 | 49.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 697 | 49.45 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 8 |
| 765 | 49.54 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 814 | 49.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 868 | 49.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 889 | 49.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 911 | 49.73 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 985 | 49.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |