Os02g0321500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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Os02g0321500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol transfer protein-like, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.08 | 0.27 | 12.1 | -1.02 | 1.14 | 0.899 | -0.607 | -0.573 | -0.219 | 21.6 | 24.88 | 96 | -- | -- |
| 33.64 | 0.27 | 12.1 | -1.1 | 1.14 | 0.926 | -0.727 | -- | -0.234 | 21.6 | 24.76 | 89 | -- | -- |
| 34.36 | 0.273 | 12.1 | -0.954 | 1.15 | 0.888 | -- | -0.788 | -0.201 | 21.6 | 24.9 | 89 | -- | -- |
| 35.46 | 0.277 | 12.1 | -1.08 | 1.15 | 0.935 | -- | -- | -0.237 | 21.6 | 24.7 | 104 | -- | -- |
| 102.93 | 0.475 | 12 | -0.89 | -- | 1.34 | -- | -0.618 | -0.126 | -- | 25.1 | 25 | -- | -- |
| 46.48 | 0.32 | 12.2 | -1.34 | 1.21 | -- | -0.691 | -- | -0.417 | 22 | -- | -- | -- | -- |
| 48.36 | 0.326 | 12.2 | -1.31 | 1.21 | -- | -- | -- | -0.416 | 22.1 | -- | -- | -- | -- |
| 103.41 | 0.476 | 12.1 | -0.982 | -- | 1.39 | -- | -- | -0.145 | -- | 25.1 | 10 | -- | -- |
| 40.14 | 0.295 | 12.1 | -- | 1.22 | 1.26 | -- | -- | -0.0331 | 22.1 | 19.14 | 47520 | -- | -- |
| 137.25 | 0.547 | 12.1 | -1.29 | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
| 93.59 | 0.453 | 12.1 | -- | 1.21 | -- | -- | -- | -0.27 | 22 | -- | -- | -- | -- |
| 127 | 0.525 | 12 | -- | -- | 1.71 | -- | -- | 0.00238 | -- | 24.8 | 2 | -- | -- |
| 181.45 | 0.629 | 12.1 | -- | -- | -- | -- | -- | -0.271 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.46 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 19 |
| 5 | 32.68 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 17 | 32.76 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 39 | 33.09 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 43 | 33.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 44 | 33.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 48 | 33.16 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 51 | 33.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 52 | 33.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 53 | 33.18 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 69 | 33.20 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 73 | 33.22 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 85 | 33.27 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 90 | 33.28 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 91 | 33.30 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 94 | 33.34 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 105 | 33.37 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 106 | 33.39 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 110 | 33.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 111 | 33.41 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 128 | 33.46 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 129 | 33.46 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 147 | 33.50 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 150 | 33.52 | temperature | 20.0 | 270 | > th | dose independent | sin | 8 | NA |
| 151 | 33.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 152 | 33.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 178 | 33.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 179 | 33.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 189 | 33.61 | temperature | 25.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 195 | 33.63 | temperature | 25.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 243 | 33.73 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 255 | 33.74 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 273 | 33.78 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 276 | 33.79 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 285 | 33.80 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 288 | 33.81 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 290 | 33.81 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 300 | 33.83 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 302 | 33.83 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 303 | 33.83 | temperature | 15.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 310 | 33.84 | temperature | 20.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 315 | 33.85 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 321 | 33.85 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 20 |
| 383 | 33.92 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 391 | 33.93 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 401 | 33.94 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 16 |
| 457 | 33.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 478 | 34.01 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 19 | 5 |
| 561 | 34.09 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 564 | 34.09 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 569 | 34.10 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 616 | 34.14 | humidity | 80.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 643 | 34.16 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 666 | 34.17 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 669 | 34.18 | humidity | 50.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 674 | 34.18 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 695 | 34.19 | humidity | 80.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 702 | 34.19 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 19 | 16 |
| 752 | 34.21 | humidity | 80.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 761 | 34.21 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 764 | 34.21 | humidity | 50.0 | 43200 | < th | dose dependent | no | NA | NA |
| 815 | 34.22 | humidity | 50.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 915 | 34.26 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 926 | 34.26 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 961 | 34.28 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 992 | 34.30 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |