Os05g0267800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cellular retinaldehyde-binding/triple function, N-terminal domain containing protein.
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Os05g0267800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cellular retinaldehyde-binding/triple function, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.07 | 0.513 | 11 | -0.758 | 0.748 | -3.47 | -0.101 | -5.91 | 0.0851 | 6.93 | 1.148 | 1462 | -- | -- |
| 129.9 | 0.531 | 11.1 | -1.13 | 0.829 | -2.24 | 0.56 | -- | 0.129 | 7.49 | 2.422 | 1452 | -- | -- |
| 117.76 | 0.505 | 11 | -0.832 | 0.75 | -3.03 | -- | -4.32 | 0.0824 | 6.9 | 1.837 | 1465 | -- | -- |
| 124.59 | 0.52 | 11.1 | -1.31 | 0.764 | -2.59 | -- | -- | -0.0107 | 5.6 | 2.973 | 1512 | -- | -- |
| 146.45 | 0.564 | 11 | -0.786 | -- | -3.01 | -- | -4.22 | 0.105 | -- | 1.991 | 1475 | -- | -- |
| 196.73 | 0.658 | 11 | -0.847 | 0.853 | -- | 0.0649 | -- | 0.285 | 7.62 | -- | -- | -- | -- |
| 196.74 | 0.657 | 11 | -0.845 | 0.853 | -- | -- | -- | 0.285 | 7.63 | -- | -- | -- | -- |
| 153.16 | 0.576 | 11.1 | -1.28 | -- | -2.57 | -- | -- | -0.0781 | -- | 2.956 | 1480 | -- | -- |
| 162.11 | 0.593 | 11 | -- | 0.827 | -2.11 | -- | -- | 0.108 | 5.74 | 3.944 | 1531 | -- | -- |
| 235.83 | 0.718 | 11 | -0.834 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 215.58 | 0.687 | 11 | -- | 0.846 | -- | -- | -- | 0.379 | 7.69 | -- | -- | -- | -- |
| 190.66 | 0.643 | 11.1 | -- | -- | -1.97 | -- | -- | 0.0873 | -- | 4.992 | 1493 | -- | -- |
| 254.16 | 0.744 | 11 | -- | -- | -- | -- | -- | 0.391 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.10 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 2 | 112.10 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 4 | 112.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 7 | 112.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 10 | 112.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 13 | 112.13 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 19 | 112.34 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 37 | 112.43 | temperature | 25 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 98 | 112.81 | temperature | 25 | 14400 | > th | dose dependent | sin | 15 | NA |
| 120 | 112.90 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 217 | 113.07 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 353 | 113.94 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 358 | 113.97 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 360 | 113.97 | temperature | 25 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 386 | 114.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 393 | 114.02 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 649 | 115.08 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 680 | 115.25 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 681 | 115.25 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 689 | 115.26 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 694 | 115.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 744 | 115.27 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 19 |
| 792 | 115.32 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 823 | 115.48 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |